Basic Information

Insect: Blastobasis adustella
Gene Symbol: -
Assembly: GCA_907269095.1
Location: OU026129.1:10167559-10182197[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3.8 3.6e+02 2.8 0.4 2 20 7 26 6 28 0.85

2 13 5.8 5.5e+02 2.2 0.0 2 20 34 52 33 54 0.88

3 13 0.17 16 7.0 0.3 1 12 216 227 216 236 0.90

4 13 0.0004 0.037 15.3 2.9 1 23 397 419 397 419 0.98

5 13 4.7e-06 0.00045 21.4 1.4 1 23 439 461 439 461 0.98

6 13 6.7 6.3e+02 2.0 0.9 1 12 486 496 486 507 0.68

7 13 1.4e-05 0.0013 19.9 1.1 1 23 513 535 513 535 0.98

8 13 0.00028 0.026 15.8 2.0 1 23 551 573 551 573 0.98

9 13 2.4e-06 0.00022 22.3 4.3 1 23 579 601 579 601 0.98

10 13 0.0038 0.36 12.2 7.5 1 23 607 629 607 629 0.98

11 13 1.9e-06 0.00018 22.6 0.4 1 23 635 657 635 657 0.98

12 13 0.00043 0.041 15.2 1.1 1 23 661 683 661 683 0.98

13 13 0.00033 0.031 15.6 0.1 1 23 691 714 691 714 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3.8	3.6e+02	2.8	0.4	2	20	7	26	6	28	0.85
2	13	5.8	5.5e+02	2.2	0.0	2	20	34	52	33	54	0.88
3	13	0.17	16	7.0	0.3	1	12	216	227	216	236	0.90
4	13	0.0004	0.037	15.3	2.9	1	23	397	419	397	419	0.98
5	13	4.7e-06	0.00045	21.4	1.4	1	23	439	461	439	461	0.98
6	13	6.7	6.3e+02	2.0	0.9	1	12	486	496	486	507	0.68
7	13	1.4e-05	0.0013	19.9	1.1	1	23	513	535	513	535	0.98
8	13	0.00028	0.026	15.8	2.0	1	23	551	573	551	573	0.98
9	13	2.4e-06	0.00022	22.3	4.3	1	23	579	601	579	601	0.98
10	13	0.0038	0.36	12.2	7.5	1	23	607	629	607	629	0.98
11	13	1.9e-06	0.00018	22.6	0.4	1	23	635	657	635	657	0.98
12	13	0.00043	0.041	15.2	1.1	1	23	661	683	661	683	0.98
13	13	0.00033	0.031	15.6	0.1	1	23	691	714	691	714	0.95

Sequence Information

Coding Sequence: ATGGGTGATGCCTCACTGAAATGCCCCTTCTGCTGCGACAAACTATTCAACAGTAAAGAGGAAATTATTGAACATTTGGCAAATATATTAGGAAATATCTCATGTCCTATTTGCAAAAATAAATGGGTTTCTTTGAATCAACTTATTCAGCATTTATCTTTAGATGACTGCCAACCACAAGTACCAACAGAAACTATTACTTTTGACACAGGTCCTGAAAGCACAATTAATGATTTAAATTCTGAAGATTCAAATCTTGTTCAGTTACCAGAACCCAAAATTTTAGCTAGCGATGATATAAGCAATGTAAAAACCTTGGAATCTTTTCCAACTATTGAATGTAAAGAGGTTGGTGTTGATGGCTCTGATATTGGTAAAATGTATGTAGAACTGTTAGGCAAGCAGTTAGCAACGCCTTGCCTCCAGACTCAAGAGTTGAAATTGGTAAAACATAATGGAGTGAGCCGCTATGTCTTCATGGTAAACGATGATTCAAATATGAGCTTGAATAACACAGTAGTCACTAAACAAAATCACGATGGTACCATATCTATGACAACAGTAAAAGACCTAAAAATGGAATCTGATACTGATACTGTCATAACTCAAGAGAATGACTTAAATCAAGATAACCAAGAAGAGATATACAGTTGTAATACATGTGGTGTATCATTTACATCTGTCATTGAACATATACAAAATTATCACAATGATCAGGAAGTCGTTGTTGAGGGGCCCCTGGAAGATACAGTTAATAATGTAGTCACCCAGGAGGAAGCACCGCTGGATAATATGTTGTCTGACCAAATAGCCATGGACAAGCAGACAATGCGCCGCATGATTACTGACACCGGCGACATTGTAGAAGAACCCACTGCTGATTCTATGTCTAAAGAATTAGTTGTGACTGGTACCAACAAGGATCCATTGGCAATTCCAAAGGAAGAAACAGACAAGGTTGAACCTAAACCTAAGCGGAAGCGTTATGTACAGATAAATAAATTTTGTGACAGTGTTGTCAAAGATATTAACCCGACTAAAGATAAAAACAATCCATACCACAAGGTGGTGGTGAAAGAGATGCGTACCTATGAAGGAGAGACTGTCCGAGTATATAATTGCATGGTATGCCACGTGTATGTCACTAGCTTAGATGACTTCAAATCACAGCCATGCAAGCAGTTGAAGTATTCATGCACGCAGTGCTCGGAGTCGTATCACAGTTCCAAGTCGCTTTACGCACATATGAAAGTTCACAAACAAAAGCCAGAGACAGGTGTTTCAGACCCCGCGACGCTGTCGGTGCCCGTCACCTTCGAGTGCGAGGTCTGCTCCACCGTGTTCACCACTAACAAGTCGCTCAAACTGCACAGGCGGATGCACGACCCTATCAAAGCCCGCCCAATCGAGCCGCCAGTGGAGACCGCTGAAGGTACCGAAGTGAGCCTGGACAGGTTCCATTGCTCGGTCTGCGACAAAATGATACCAATGGACTACAAAACTATTCACCAGAACTCTCATAAAAACACGACGATGTTCAATTGCGACATATGCAACAAGAAGTTCCAGTCTAGTCAATATCTAGAGATGCATATGAATGTGCATGCTGCGGATAAGGTAACAGTGAACAAGCAAGACAAGTCGTTGCCGTACACCTGCCTCTACTGCGATCGGAGGTTCGCGCGACCCCACGAGAAAGTGAAACACGAGCGAATACACACGGGCGAGAAGCCCCACACGTGCGCGATCTGCGGCAAGTCGTTCCGCGTGTCGTACTGCCTCACGCTGCACATGCGCACGCACACCGGCGCAAGGCCCTACTCCTGCCAGCACTGCGGGAAGAGGTTCAAAGCCCACAGCGTGTACAACCACCACCTGCTGACCCATTCGGAGGTTCGCGCGTACAAATGCCCGTACTGCCCCAAAGCGTTCAAGACCTCCGTGCAACTCGCTGGGCATAAGAACTCGCACACCAAGCCGTTCTCCTGCCAGCATTGTAATCGACCATTCGCCTCGCTGTACGCCGTCCGCGTGCACACAGAGACGCACGCACGCCAGAACAATTTGAAATTCGCGTGCACCCTCTGCGGAGCGTCCTACGCACGTGCCTTCGCACTCAAGGACCACATCAAACAGGTGCATCAGCAGAACGTCATTGATGAGAAGGAACTGGTCACTGTGCCAGGTACCTTTGATGTTGTTGGCTGA
Protein Sequence: MGDASLKCPFCCDKLFNSKEEIIEHLANILGNISCPICKNKWVSLNQLIQHLSLDDCQPQVPTETITFDTGPESTINDLNSEDSNLVQLPEPKILASDDISNVKTLESFPTIECKEVGVDGSDIGKMYVELLGKQLATPCLQTQELKLVKHNGVSRYVFMVNDDSNMSLNNTVVTKQNHDGTISMTTVKDLKMESDTDTVITQENDLNQDNQEEIYSCNTCGVSFTSVIEHIQNYHNDQEVVVEGPLEDTVNNVVTQEEAPLDNMLSDQIAMDKQTMRRMITDTGDIVEEPTADSMSKELVVTGTNKDPLAIPKEETDKVEPKPKRKRYVQINKFCDSVVKDINPTKDKNNPYHKVVVKEMRTYEGETVRVYNCMVCHVYVTSLDDFKSQPCKQLKYSCTQCSESYHSSKSLYAHMKVHKQKPETGVSDPATLSVPVTFECEVCSTVFTTNKSLKLHRRMHDPIKARPIEPPVETAEGTEVSLDRFHCSVCDKMIPMDYKTIHQNSHKNTTMFNCDICNKKFQSSQYLEMHMNVHAADKVTVNKQDKSLPYTCLYCDRRFARPHEKVKHERIHTGEKPHTCAICGKSFRVSYCLTLHMRTHTGARPYSCQHCGKRFKAHSVYNHHLLTHSEVRAYKCPYCPKAFKTSVQLAGHKNSHTKPFSCQHCNRPFASLYAVRVHTETHARQNNLKFACTLCGASYARAFALKDHIKQVHQQNVIDEKELVTVPGTFDVVG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00209136;
90% Identity: iTF_00209136;
80% Identity: -