Blac012281.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Blastobasis lacticolella
Gene Symbol
-
Assembly
GCA_905147135.1
Location
LR990046.1:17216815-17224583[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.00095 0.086 14.4 1.0 1 23 189 211 189 211 0.98
2 28 0.0054 0.5 12.0 0.7 2 19 250 267 249 270 0.93
3 28 3.4e-05 0.0031 18.9 0.5 3 23 312 333 310 333 0.96
4 28 0.012 1.1 10.9 0.9 2 23 389 411 388 411 0.95
5 28 0.0052 0.48 12.0 0.1 1 23 428 450 428 450 0.96
6 28 0.0001 0.0094 17.4 4.9 1 23 490 512 490 512 0.98
7 28 0.00032 0.03 15.8 1.3 2 23 555 576 555 576 0.97
8 28 0.0015 0.13 13.8 1.4 1 23 626 649 626 649 0.97
9 28 0.00087 0.079 14.5 0.9 1 23 697 719 697 719 0.96
10 28 0.015 1.4 10.5 5.3 2 23 731 752 730 752 0.96
11 28 0.069 6.3 8.5 0.2 2 23 764 785 763 785 0.92
12 28 0.0042 0.39 12.3 1.0 1 23 795 817 795 817 0.98
13 28 0.023 2.1 10.0 4.6 1 23 847 869 847 869 0.97
14 28 0.061 5.5 8.7 5.5 1 23 880 902 880 902 0.98
15 28 7e-05 0.0064 17.9 0.5 1 23 910 932 910 932 0.97
16 28 0.00069 0.063 14.8 1.3 2 23 952 974 951 974 0.97
17 28 0.41 37 6.1 1.2 1 23 992 1014 992 1014 0.98
18 28 2.8 2.6e+02 3.4 2.4 1 23 1021 1043 1021 1043 0.91
19 28 0.011 0.98 11.0 4.2 2 23 1054 1076 1053 1076 0.95
20 28 0.0098 0.89 11.2 0.8 2 23 1099 1120 1098 1120 0.95
21 28 0.005 0.46 12.1 0.3 2 23 1201 1222 1200 1222 0.95
22 28 0.044 4.1 9.1 2.0 3 23 1230 1250 1228 1250 0.96
23 28 0.017 1.5 10.4 0.9 2 23 1261 1283 1260 1283 0.95
24 28 0.17 16 7.3 1.8 2 23 1300 1318 1299 1318 0.95
25 28 1.8 1.7e+02 4.0 2.9 2 21 1322 1341 1322 1342 0.92
26 28 0.68 62 5.4 1.1 2 23 1392 1413 1391 1413 0.92
27 28 0.04 3.6 9.2 0.4 2 23 1424 1446 1423 1446 0.95
28 28 1 93 4.8 1.3 2 23 1462 1480 1462 1480 0.84

Sequence Information

Coding Sequence
ATGATAAACGTTCAGACATCTGTCCGATGCACGGCGGCAACTGTCGTCCAAACATGTACAGTTCCACAGTTTAGAAAAGATGAGGTATACGAAGGCGATGGATTACCTGATAAAATATGCTCGGAGTGCGTTCAAAAACTGAGCGGTGCGTACATCTTCAAGCAGCAGTGCGAGAGATCCGACAATGAGTTGCGGAGAAACTACGTCGCTCCTCCAGGTTTTAGCGTCACTCCGCCGCCGCCGAACCGGCAGAGCAGCGACTCGGCGTTCTCGTCGGGGCACACCGATGTCTCCTCGCACAAAAAGCCATCCCCGAGCGAGAAGATGACCCCCGCCAGCCGCGGCCGCAAGCGCAGCCACGAGAGCATAGACAACACCTCGGTCAGCAGCCACTCCCACGACTACAAACCAAAGACCTCTAAGCGCATCGAAGAATTGCGAAACTCCAGAAAGCGGTCAAGGAACAACTCACCCAACAACTACCTTATGGATTCGGACTACGAAGACAACAGCGTCTCCCAGTTCTCCGCGGAGACGGACTCCGACGAACCCCTGATCCATATGTACAAATGCGACATCTGCCCCATTGAGTACAAATCGGCGAAGAGTTTAGCTATGCACAAAAGGCACCATAACAAGAAGCTAGAACTGAGTAAGAAGAAAGAGAATATGGGTGAAAACGCCGTAGTCGATATCCCGACGAGCAGCCGGCCGTCGCAAGACGCGAACGATGACGACGACAAATTGAAATGTGAAAAGTGTTCTAAAACgttcaaattgaaaataatgcTCAATCGACACTCGGAATCTTGTGGGAAGACGCCGCAAACGTCACCTCAAAAGCAGTTGCAGGTTAGTTTGGAACCGATAGACGTAGTCATGAAAAAACACGGCGACAGTCCGACTAAAGCTGGTGATGGTAATAAAATCGACTGCCAAATGTGTACGACCAAATTTAAGACCATTGATAATCTCGAAAAGCATATGAGGGTGGTACACGCGGCggtgttaaaaaaaaatctgaaagCATTGGAAGAGGAATCGGGCGCCCCAGGAAGGGTGGTCGTGCCCTGTATTTTCTGTCACACAAAGTTTGACGACTACTACATTCACAGCGCACATTTCAGTTCTTGTTCGAAGCGGAAagataatataaatgaaatcGTATGTCCCTTGTGCAGTCGGACGTTGACCAAGAGGTCGTCTTATTTTACCCATCTAAAGAATTTACATTTTTGGCCACAGAATCCTAAAGTTGAAAAGCCGCAGAGTAAGCAGGAATTTGAATGCCGTATTTGTACTAAAAAGCTGGCGTCGCAGGATCTTCTGATCACGCATTTAGCGGGGCATATGTCGACTATGGAAGATAATAATAGCCAAGATGGAGGCGATGATTCCAGAAATTCCACCAACGACAACGCATCAATCCAATCTGAGCACAGCTCGTCTGTAGTCTCCACTGGTCTATACAAATGCAACTTGTGCGACAAGTCGTTCACATACAAGAAGTCATTCCAATCGCATAAGGAGAAACATTCCCAAGTAGAAGTGAAGACCGAGCCGCCCGACAAGCCGTCAACGAGCCGCTTGACAGTGAGTCCTCGCAATGCGCCTCGCGAGGACTCAGACTTCGAATCCAGTCCCGGCGAGGGGGACGACAACACCTGCGACATTTGCGAGAAGCAGTTCTCCTACAAACGACTGCTGATCGCGCACAAGAAGAAGCACACAATGGCAGCCGGCTTCAAGCGGGCGAAGATCAACCTGAAGGATTGCTCGGTGCGCTGCCTGATCTGCGATGTCGAGATGAAGGTGTCCGAGATCAACGAGCACAACCAGAAGCACAAGAACAAGAACATAAAGCCGCGCAACCAATACACGTGTGCGGAATGCAGCACGCGCTTCAGGAGCTGTACTTCCTTGGCAGAGCACATCAAACTGGTCCATCGCATGAAGCAGGCGCCAGCTGTGCCCTTCGATGGCAACAACTTGGCGGATTTTTGTGAGGTCGTTGTGACTAAAGTGGAGCCGCTGGACGAGGTCCAGAGTCACAACGGCTTTTGTGAGGTTCCGCTGCTCGGCGAGGGATTCGACTGCCACATTTGCGGCAAGAAGATGCCCACACAGATATCGCTCAAGCGCCACGTCAACTGGCACGAGAACGTCGGCAACAATATAGAGAAGCAGATCGAGTGCTTCGTCTGCAAAGAGATGTTCCGGTTCCAGTGCCACTACCGCACGCACATGCGCGCGCACTACGCCGACCCCGCGCTGGACCCCGCGCTGCTGACGTGCCCCATCTGCGGCCGCCGCAGCAAGAACCTCCGCGCCGCCCAGGCCCACACCACCTTCCACAAGCAGACGCGCTTCAAGAACAAGGACTACCAGTGCTCGATATGCAAACGCGTCTTCCAGTACCGCAAGGTGTATCTGTCCCACATGGCGATACACTACAAGAAGGGCGACGGCCAGAACACCATAGTGGGCGACCGGCCCTCCAACCAGATGCGCGCGAACAACGACAGCCTCGACGGCGCGCACACCTGCCCGCAGTGCGGGAAGGTGTGCGACTCGGAGAACTCGCTCAAGTGCCACATCCGCTGGCACTCGTCCAAGGCGTCGCTGTACGGCTCCCGGCACGAGTGCAGCGTCTGCCGGCTGCAGTTCACCAACAAGCGGCGGCTCGAGCTCCACCACCGCTCGCACTACGAGGACGAGAACGGCCCCTTCAAGTGCACCGTCTGCGGGAAGGGCTACATCGACGAGGACTACTTCCGGCGGCACGTCAAGGGCCACAACTTCGACCACCAGTCCCATCGGAAGCGCATCGAGAAGCTGAGGAAGAACAAGGTGAAGTGCCCCATCTGCAGCCGGTTCTACCAGAGCCTGGTCCACCTGATCCGGCACATAAAGCGCTCGCACCCGGAGAGCAAGATGATAAAGACGGATCCggacgcgccgccgccgcagtaCTACACGTGCAAGCTGTGCGCCAAGGGGTTCCTCACCGAGACGCGGCTGCGCAACCACGAGCAGCGCCACCTGCGCGCGCCGCACTTTTTCAAGTGCAAGTTCTGCGGCAGGAAGGCCGTCTCGCTCAAGAGCCACAACTTGCACATCAAGGGCCACCTCACCAAGAACTACCGCGAGAACCCGCTCAAGTGCCCGCACTGCGACGAGAAGTTCATCAAGGGCTACACGCTGCACCACCACCTGCGGGACGTCCACGGCATCGAGGAGACCTGGATCGCGGAGCCCAGCGACCCGGCGCTGGAGGGGCCGCTCAAGGAGCTGCAGTGCTCCGTCTGCCACAAGCTGCTCGCCAGCAAGGGCAACTACGAGCGGCACATCGACTACCACAACACCCTGCGGTGCAACTACTGCTTCGACTACTTCAGCTCGCTCAAGTTCCTCGAGGGGCACCTGGCCTTCAACTGCGAGAAGAAGATGCTGATCGGCGACACGGAGCCGCACCCGCGGCGCGTCAAGTGCCACGTCTGCTACAAGGCCTTCCACTTGCAGGTGAAGCTCGACTGCCACCTGCGCTCGCAGCACAAGATCCTCGTCGACCGGGAGGCGGCCGAGGAGAAGCGCGACATCACCTGCGACTACTGCTTCAAGGTGTTCGAGAACGAGTACGCGCTCAGCTTGCACAAGATCTACCACCGCACCATCGGCTACTACGGCTGCATGTACTGCCCGCGGAAGTTCAACACCATGACGCTCTATCGCAAGCACAAGAACTATCACTTCGCGCAGATCAACGTGGACAACCCGACCAAGTGCGAGCACTGCGACGAGACCTTCGTCGCCTTCCGCGACATGATCTACCACATGCGGGACGAGCACGGCGACAACAAGGAGTGGGTGGTGATGCCGAAGGACGACCGCGAGGACACCTGCACCATCTGCAAGAAGGCCTTCTGGAACCTGCACCGGCACATGGCCTACCACGAGGAGAACCGCTGCAAGAAGTGCGGCGAGTACTTCTTCTCGCACACCGACTACGACCAGCACCTGTGCGCCATCGAGAGCGAGGACGAGATCGACGAGACCAACCCCAACGACATCCGGGTGCCCACCTACGAGGAGTGCACTTTCTGCTTCAAGCCCGTCACCAAGAAGCACTCGAAGATGTTGCACAACAACCTGCACAGGGTTTCCGGAGCGATCTCGTGCCGGTTCTGCCCGCTCAAGTTCAAGACGATGGACGCGTTCACACTCCACTCGTTCTCTCATCGCAGCAGAAAGTACAACAACAAGCCTATCAAGTGCAGGATTTGTGGCGACAAGTTCTACAGGTACGGACCGTTCATGAAGCATATGAAGGAAGTTCACAAGTCCCAGAAGAAAGTGCACTACCGCGCCTTGGTGAAGGCGGAGCGCTGCGTCGTGTGCGGGGAGAGCTTCCCCAACCTCCACAACCACTACCGATACCATCTCCAGTTCCAGTGCCAGGATTGCCTCAAATACATATGCTCCTCGAAACTCTTCGACAATCACAAATGCGACGTGCCCGATGCGGACCCCACCAAAGTGTTTACGAGCGATGAAAATCTGGCCGCTCTCATAAAAGCCTACGTTCCGAAAGACGAGAAAGATGACGAAAAGTACTACGGGTACACTGATGACGAGGAAGAAGGGGAAACGCAGTTTGGGGCCGCACCGGCCGCGGCGAGCGCGGAACCCGCCGCGACCGCTCCGGCCGCGTCGGCGAACGGCGACACTCAGAATCCTCAAGCTTCCGCCGAATCCGAAGAAAGCCTGTACGTGCAACCTTTCATCATATCCGATGTGTTATCGCTTTACCAAAAACAAGAAGAGCTACTGGCTAGGTACCAAAACAAAGACACGAATTCAAAGAAACTGGAAGAGATTGCAAACAACAAATCTATTGTAAGCGATAACAGCGCCAGTAACATAGAAATTGTGGATTTATCAGATGATGAGCCCATAATAGAAATGAATGGTGATTGTCCTGTAATCACTATTGATGACGATTAG
Protein Sequence
MINVQTSVRCTAATVVQTCTVPQFRKDEVYEGDGLPDKICSECVQKLSGAYIFKQQCERSDNELRRNYVAPPGFSVTPPPPNRQSSDSAFSSGHTDVSSHKKPSPSEKMTPASRGRKRSHESIDNTSVSSHSHDYKPKTSKRIEELRNSRKRSRNNSPNNYLMDSDYEDNSVSQFSAETDSDEPLIHMYKCDICPIEYKSAKSLAMHKRHHNKKLELSKKKENMGENAVVDIPTSSRPSQDANDDDDKLKCEKCSKTFKLKIMLNRHSESCGKTPQTSPQKQLQVSLEPIDVVMKKHGDSPTKAGDGNKIDCQMCTTKFKTIDNLEKHMRVVHAAVLKKNLKALEEESGAPGRVVVPCIFCHTKFDDYYIHSAHFSSCSKRKDNINEIVCPLCSRTLTKRSSYFTHLKNLHFWPQNPKVEKPQSKQEFECRICTKKLASQDLLITHLAGHMSTMEDNNSQDGGDDSRNSTNDNASIQSEHSSSVVSTGLYKCNLCDKSFTYKKSFQSHKEKHSQVEVKTEPPDKPSTSRLTVSPRNAPREDSDFESSPGEGDDNTCDICEKQFSYKRLLIAHKKKHTMAAGFKRAKINLKDCSVRCLICDVEMKVSEINEHNQKHKNKNIKPRNQYTCAECSTRFRSCTSLAEHIKLVHRMKQAPAVPFDGNNLADFCEVVVTKVEPLDEVQSHNGFCEVPLLGEGFDCHICGKKMPTQISLKRHVNWHENVGNNIEKQIECFVCKEMFRFQCHYRTHMRAHYADPALDPALLTCPICGRRSKNLRAAQAHTTFHKQTRFKNKDYQCSICKRVFQYRKVYLSHMAIHYKKGDGQNTIVGDRPSNQMRANNDSLDGAHTCPQCGKVCDSENSLKCHIRWHSSKASLYGSRHECSVCRLQFTNKRRLELHHRSHYEDENGPFKCTVCGKGYIDEDYFRRHVKGHNFDHQSHRKRIEKLRKNKVKCPICSRFYQSLVHLIRHIKRSHPESKMIKTDPDAPPPQYYTCKLCAKGFLTETRLRNHEQRHLRAPHFFKCKFCGRKAVSLKSHNLHIKGHLTKNYRENPLKCPHCDEKFIKGYTLHHHLRDVHGIEETWIAEPSDPALEGPLKELQCSVCHKLLASKGNYERHIDYHNTLRCNYCFDYFSSLKFLEGHLAFNCEKKMLIGDTEPHPRRVKCHVCYKAFHLQVKLDCHLRSQHKILVDREAAEEKRDITCDYCFKVFENEYALSLHKIYHRTIGYYGCMYCPRKFNTMTLYRKHKNYHFAQINVDNPTKCEHCDETFVAFRDMIYHMRDEHGDNKEWVVMPKDDREDTCTICKKAFWNLHRHMAYHEENRCKKCGEYFFSHTDYDQHLCAIESEDEIDETNPNDIRVPTYEECTFCFKPVTKKHSKMLHNNLHRVSGAISCRFCPLKFKTMDAFTLHSFSHRSRKYNNKPIKCRICGDKFYRYGPFMKHMKEVHKSQKKVHYRALVKAERCVVCGESFPNLHNHYRYHLQFQCQDCLKYICSSKLFDNHKCDVPDADPTKVFTSDENLAALIKAYVPKDEKDDEKYYGYTDDEEEGETQFGAAPAAASAEPAATAPAASANGDTQNPQASAESEESLYVQPFIISDVLSLYQKQEELLARYQNKDTNSKKLEEIANNKSIVSDNSASNIEIVDLSDDEPIIEMNGDCPVITIDDD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00208131;
90% Identity
iTF_00208131;
80% Identity
-