Badu019256.1
Basic Information
- Insect
- Blastobasis adustella
- Gene Symbol
- -
- Assembly
- GCA_907269095.1
- Location
- OU026119.1:4341223-4349390[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.0007 0.066 14.6 0.8 1 23 201 223 201 223 0.98 2 27 0.0039 0.37 12.2 0.9 2 19 261 278 260 281 0.93 3 27 4.6e-05 0.0043 18.3 0.5 3 23 323 344 321 344 0.96 4 27 0.01 0.96 10.9 0.9 2 23 400 422 399 422 0.95 5 27 0.0034 0.32 12.4 0.1 1 23 439 461 439 461 0.96 6 27 8.9e-05 0.0084 17.4 4.9 1 23 501 523 501 523 0.98 7 27 0.00028 0.026 15.8 1.3 2 23 565 586 565 586 0.97 8 27 0.00064 0.061 14.7 0.8 1 23 636 659 636 659 0.97 9 27 0.00075 0.071 14.5 0.9 1 23 707 729 707 729 0.96 10 27 0.0081 0.77 11.2 5.6 2 23 741 762 740 762 0.96 11 27 0.024 2.3 9.7 0.2 2 23 774 795 773 795 0.94 12 27 0.0071 0.67 11.4 1.1 1 23 805 827 805 827 0.98 13 27 0.028 2.7 9.5 4.5 1 23 857 879 857 879 0.97 14 27 0.021 2 9.9 5.2 1 23 890 912 890 912 0.98 15 27 6e-05 0.0057 17.9 0.5 1 23 920 942 920 942 0.97 16 27 0.0011 0.1 14.0 1.3 2 23 962 984 961 984 0.97 17 27 0.18 17 7.0 1.2 1 23 1002 1024 1002 1024 0.98 18 27 2.4 2.3e+02 3.4 2.4 1 23 1031 1053 1031 1053 0.91 19 27 0.032 3 9.3 4.2 2 23 1064 1086 1063 1086 0.95 20 27 0.0084 0.8 11.2 0.8 2 23 1109 1130 1108 1130 0.95 21 27 0.0041 0.39 12.1 0.3 2 23 1211 1232 1210 1232 0.95 22 27 0.033 3.1 9.3 1.9 3 23 1240 1260 1238 1260 0.96 23 27 0.015 1.4 10.4 0.9 2 23 1271 1293 1270 1293 0.95 24 27 0.11 11 7.6 2.6 2 23 1310 1328 1309 1328 0.95 25 27 1.6 1.5e+02 4.0 2.9 2 21 1332 1351 1332 1352 0.92 26 27 0.58 55 5.4 1.1 2 23 1402 1423 1401 1423 0.92 27 27 0.034 3.2 9.2 0.4 2 23 1434 1456 1433 1456 0.95
Sequence Information
- Coding Sequence
- ATGGCACTCAAGCTAGGAAAATGCAGGCTTTGCTTGAAACTTGGCGATTTCTTCTCCATCTTCACGACCGACAATGCCGTGCAACTTGCCGACATGGTAATGGAATGCGCTCGAGTAAAGGTATACGAAGGCGATGGATTACCTGATAAAATATGCTCGGAGTGCGTTCAAAAACTCAGCGGTGCGTACATCTTTAAGCAGCAGTGCGAGAGATCCGACAATGAGCTGCGGAGAAACTATGTCCCTCCTCCAGGTTTTAGCGTCACTCCGCCGCCGCCGAACCGCCAGAGCAGCGACTCAGCGTTCTCGTCGGGGCACACCGACGTCTCCTCGCACAACAAGCCATCCCCGAGCGAGAAGCTGACCCCCGCCAGCCGCGGCCGCAAGCGCAGCCACGAGAGCATAGACAACACCTCAGTCAGCAGCCATTCCCACGACTACAAACCAAAGACCACTAAGCGCATCGAAGAATTGCGCAACTCCAGAAAACGGTCAAGAAACAACTCGCCCAACAACTCCCTTATGGATTCGGACTACGAAGACAACAGCGTCTCCCAGTTCTCCGCGGAGACGGACTCCGACGAACCCCTGATCCATATGTACAAATGCGACATCTGCCCTGTTGAGTACAAATCGGCGAAGAGCTTAGCTGTGCACAAAAGGCACCATAACAAGAAGCTAGAACTGAAAAAGAAAGAGAATATGGGCAAAAACGCCGTGGTCGATATCCCGACGAACAGCCGGCAGTCGCAAGACGCGAACGATGACGACGACAAATTGAAATGTGAAAAGTGTTCTAAAACGTTCAAATTGAAAATAATGCTCAAACGACACTCGGAATCTTGTGGGAAGACGCCGCAAACGTCGCCTCAAAAGCAGTTGCAGGTTAGTTTGGAACCGATAGACATAGTCATGAAGAAGTGCGGAGACAGTCCGACCAAAGCTGGTGATGGTAATAAAATCGATTGCCAAATGTGTACAACCAAATTCAAGACCATTGAGAATCTCGAAAAACATATGAGGGTGGTACACGCGGCGGTGTTAAAGAAAAATCTGAAAGCATTGGAAGAGGAATCGGGCGCCCCAGGAAGGGTGGTGGTGCCCTGTATATTCTGTCACACCAAGTTTGACGACTACTACATTCACAGCGCACATTTCACTTCGTGTTCGAAACGGAAAGATAATATAAATGAAATCGTGTGTCCCTTATGCAGTCGGACGTTGACCAAGAGGTCGTCTTATTTTACCCATCTAAAGAATTTACATTTTTGGCCACAGAATCCTAAAGTTGAAAAGCCGCAGAGTAAGCAGGAATTTGAATGCCGTATTTGCTCCAAAAAGCTGGCGTCGCAGGGTCTTCTTATCAAGCATTTAGCGGGGCATATGTCGACTATGGAAGATAATAATAGCCAAGATGGAGGCGATGACTCCAGAAATTTCACCGACGACAACGCATCAATCCAATCGGAGCACAGCTCGTCTGTAGTCTCCACTGGTCCATACAAATGCAACTTGTGCGACAAGTCGTTCACATACAAGAAGTCATTCCAGTCACATAAAGAAAAACATTCCCAAGTAGAAGTGAAGACCGAGCCGCCAGACAAGCCGTCGACGAGCCACTTGAAAGTGGCTCGAAAAGCGCCTCGCGAGGACTCGGACTTCGAGTCGAGTCCCGGCGAGGGGGACGACAACACCTGCGACATTTGCGAGAAGCAGTTCTCCTACAAACGACTCCTGATCGCGCACAAGAAGAAGCACACAATGGCAGCCGGCTTCAAGCGGGCCAAGATCAACTTAAAGGATTGCTCGGTTCGCTGCCTGATCTGCGACGTGGAGATGAAGGTGTCCGAGATCAACGAGCACAACCAGAAGCACAAGATCGCGAACATAAAGCCGCGCAACCAATACACTTGCGCGGAATGCAGCGCGCGGTTCAAGAGCTGCAGTTCCTTGGCAGAGCACATCAAATTGGTCCACCGCATGAAGCAGGCGCCAGCTGTGCCCTTCGATGGCAACAACTTGGCGGATTTTTGTGAGGTCGTTGTGACTAAAGCGGAACCGCTGGACGAGGTCCAGAGTCACAACGGCTTTGGTGAGGTTCCGCTGCTCGGCGAGGGATTCGACTGCCACATTTGCGGCAAGAAGATGCCCACACAGATATCGCTCAAGCGCCACGTCAACTGGCACGAGAACGTCGGAAACAATATAGAGAAGCAGATCGAGTGCTTCGTCTGCAAAGAGACGTTCCGGTTCCAGTGCCACTACCGCACGCACATGCGCGCGCACTACGCCGACCCGAACCTGGACCCCGCGCTGCTGACGTGCCCCATCTGCGGCCGCCGCAGCAAGAACCTGCGCGCTGCCCAGGCCCACACCAACTTCCACAAGCAGACGCGCTTCAAGAACAAGGACTACCAGTGCTCGATATGCAAACGCGTCTTCCAGTTCCGAAAGGTGTATCTATCCCACATGGCGATACACTACAAGAAGGGCGACGGCCAGAACACGATAGTGGGCGACCGGCCCTCCAACCAGATGCGCGCGAACAACGACAGCCTCGACGGCGCGCACTCGTGCCCGCAGTGCGGGAAGGTGTGCGACTCGGAGAACTCGCTCAAGTGCCACATCCGCTGGCACTCCTCCAAGTCGTCGCTGTACGGCTCCCGGCACGAGTGCAGCGTCTGCCAGCTGCAGTTCACCAACAAGCGCCGGCTCGAGCTGCACCACCGCTCGCACTACGAGGACGAGAACGGCCCCTTCAAGTGCACCGTCTGCGGGAAGGGCTACATCGACGAGGACTACTTCCGGAGGCACGTCAAGGGCCACAACTTCGACCACCAGTCCCATCAGAAGCGCATCGAGAAACTGAGGAAGAACAAGGTGAAGTGCCCCATCTGCAGCCGGTTCTACCAGAGCCTGATCCACCTGATCCGGCACATAAAGCGCTCGCACCCGGAGAGCAAGATGATAAAGACGGACCCGGACGCGCCTCCGCCGCAGTACTACACGTGCAAGCTGTGCGCCAAGGCGTTCCTCACCGAGACGCGGCTGCGCAACCACGAGCAGCGCCACCTGCGCGCGCCGCACTTCTTCAAGTGCAAGTTCTGCGGCCGGAAGGCCGTCTCGCTCAAGAGCCACAACCTGCACATCAAGGGCCACCTCACCAAGAACTACCGCGACAACCCGCTCAAGTGCCCGCACTGCGAGGAGAAGTTCATCAAGGGCTACACGCTGCACCACCACCTGCGCGACGTGCACGACATCGAGGAGACCTGGATCGCGGAGCCCAGCGACCAGGCGCTCGAGGGGCCGCTCAAGGAGCTGCAGTGCTCGGTCTGCCACAAGCTGCTCGCCAGCAAGGGCAACTACGAGAGGCACATCGACTACCACAACACCCTGCGGTGCAACTACTGCTTCGACTACTTCAGCTCGCTCAAGTTCCTCGAGGGGCACCTGGCGTTCAACTGCGAGAAGAAGATGCTGATAGGGGACACGGAGCCGCACCCGCGGCGCGTGAAGTGCCACGTCTGCTACAAGGCCTTCCACCTGCAGGTCAAGCTGGACTGCCACCTGCGCTCGCAGCACCAGATCCTCGTCGACCGGGAGGCCTCCGAGGAGAAGCGCGACATCACGTGCGACTACTGCTTCAAGGTGTTCGAGAACGAGTACGCGCTCAGCATGCACAAGATCTACCATCGCACCATCGGCTACTACGGGTGCTTGTACTGCCCGCGGAAGTTCAACACGATGACGCTCTATCGCAAGCACAAGAACTATCACTTCGCGCAGATCAACGTGGACAACCCGACCAAGTGCGAGCACTGCGACGAGACGTTCGTCGCCTTCCGCGACATGATCTACCACATGCGGGACGACCACGACGACAACAAAGAGTGGGTGGTGAAGCCGAAGGACGACCGCGAGGACACCTGCACCATCTGCAAGAAGACCTTCTGGAACCTGCACCGCCACATGGCCTACCACGAGGAGAACCGCTGCAAGAAGTGCGGCGAGTACTTCTTCTCGCACACCGACTACGACCAGCACCTGTGCGCCATCGAGAGCGAAGACGAGATCGACGAGACCAACCCCAACGACATCCGGGTGCCCACCTACGAGGAGTGCACTTTCTGCTTCAAGCCCGTCACCAAGAAGCACTCGAAGATGTTGCACAACAACCTGCACAGGGTTTCCGGAGCGATCTCGTGCCGGTTCTGCCCGCTCAAGTTCAAGACGATGGACGCGTTCACACTCCACTCGTTCTCGCATCGCAGCAGAAAGTACAACAACAAGCCCATCAAGTGTAGGATTTGTGGCGACAAGTTCTACAGGTACGGACCGTTCATGAAGCATATGAAGGAAGTCCACAAGTCCAAGAAGAAAGTGCACTACCGCGCCTTGGTGAAGGCGGAGCGCTGCGTCGTGTGCGGGGACAGCTTCCCCAACCTCCACAACCACTACCGATACCATCTGCAGTTCCAATGCCAGGATTGCCTCAAGTACATATCCTCCTCGAAACTGTTCGACAATCACAAATGCGACGTGCCCGATGCGGACCCTACCAAAGTGTTTACGAGTGATGAAAATCTATCCGCTCTCATAAAAGCCTACGTCCCGAAAGACGAGAAAGACGACGAAAAATACTATGGGTACACTGATGACGAGGAGGAGGAAGAAGTGGAAACGCAGTTTGGGGCCGCACCGGCCGCAGCGAGCGCAGCGACCACAGCGACGGCTTCAGCCGCGTCGGCGAACGGCGATACTCAAAATCCTCAAGCTTCCGCCGAATCCGAAGAAAGCCTATACGTGCAACCTTTCATCATATCCGATGTGTTATCGCTCTACCAGAAACAGGAAGAGTTACTGGCGAGGTACCAGAATAAAGACACGAATTCAAAGAAACTGGAAGAGATCGCAAACAACAAATCTATTATAAGCGATAACAGCGCGAGTAACATAGATATTGTGGATTTATCAGATGATGAGCCCATAATAGAAATGAATGGTGATTGTCCTGTAATTACTATTGATGACGATTAG
- Protein Sequence
- MALKLGKCRLCLKLGDFFSIFTTDNAVQLADMVMECARVKVYEGDGLPDKICSECVQKLSGAYIFKQQCERSDNELRRNYVPPPGFSVTPPPPNRQSSDSAFSSGHTDVSSHNKPSPSEKLTPASRGRKRSHESIDNTSVSSHSHDYKPKTTKRIEELRNSRKRSRNNSPNNSLMDSDYEDNSVSQFSAETDSDEPLIHMYKCDICPVEYKSAKSLAVHKRHHNKKLELKKKENMGKNAVVDIPTNSRQSQDANDDDDKLKCEKCSKTFKLKIMLKRHSESCGKTPQTSPQKQLQVSLEPIDIVMKKCGDSPTKAGDGNKIDCQMCTTKFKTIENLEKHMRVVHAAVLKKNLKALEEESGAPGRVVVPCIFCHTKFDDYYIHSAHFTSCSKRKDNINEIVCPLCSRTLTKRSSYFTHLKNLHFWPQNPKVEKPQSKQEFECRICSKKLASQGLLIKHLAGHMSTMEDNNSQDGGDDSRNFTDDNASIQSEHSSSVVSTGPYKCNLCDKSFTYKKSFQSHKEKHSQVEVKTEPPDKPSTSHLKVARKAPREDSDFESSPGEGDDNTCDICEKQFSYKRLLIAHKKKHTMAAGFKRAKINLKDCSVRCLICDVEMKVSEINEHNQKHKIANIKPRNQYTCAECSARFKSCSSLAEHIKLVHRMKQAPAVPFDGNNLADFCEVVVTKAEPLDEVQSHNGFGEVPLLGEGFDCHICGKKMPTQISLKRHVNWHENVGNNIEKQIECFVCKETFRFQCHYRTHMRAHYADPNLDPALLTCPICGRRSKNLRAAQAHTNFHKQTRFKNKDYQCSICKRVFQFRKVYLSHMAIHYKKGDGQNTIVGDRPSNQMRANNDSLDGAHSCPQCGKVCDSENSLKCHIRWHSSKSSLYGSRHECSVCQLQFTNKRRLELHHRSHYEDENGPFKCTVCGKGYIDEDYFRRHVKGHNFDHQSHQKRIEKLRKNKVKCPICSRFYQSLIHLIRHIKRSHPESKMIKTDPDAPPPQYYTCKLCAKAFLTETRLRNHEQRHLRAPHFFKCKFCGRKAVSLKSHNLHIKGHLTKNYRDNPLKCPHCEEKFIKGYTLHHHLRDVHDIEETWIAEPSDQALEGPLKELQCSVCHKLLASKGNYERHIDYHNTLRCNYCFDYFSSLKFLEGHLAFNCEKKMLIGDTEPHPRRVKCHVCYKAFHLQVKLDCHLRSQHQILVDREASEEKRDITCDYCFKVFENEYALSMHKIYHRTIGYYGCLYCPRKFNTMTLYRKHKNYHFAQINVDNPTKCEHCDETFVAFRDMIYHMRDDHDDNKEWVVKPKDDREDTCTICKKTFWNLHRHMAYHEENRCKKCGEYFFSHTDYDQHLCAIESEDEIDETNPNDIRVPTYEECTFCFKPVTKKHSKMLHNNLHRVSGAISCRFCPLKFKTMDAFTLHSFSHRSRKYNNKPIKCRICGDKFYRYGPFMKHMKEVHKSKKKVHYRALVKAERCVVCGDSFPNLHNHYRYHLQFQCQDCLKYISSSKLFDNHKCDVPDADPTKVFTSDENLSALIKAYVPKDEKDDEKYYGYTDDEEEEEVETQFGAAPAAASAATTATASAASANGDTQNPQASAESEESLYVQPFIISDVLSLYQKQEELLARYQNKDTNSKKLEEIANNKSIISDNSASNIDIVDLSDDEPIIEMNGDCPVITIDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00209112;
- 90% Identity
- iTF_00209112;
- 80% Identity
- -