Basic Information

Insect: Blastobasis adustella
Gene Symbol: -
Assembly: GCA_907269095.1
Location: OU026118.1:14897813-14903277[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 9.6e-06 0.00091 20.4 0.1 1 23 439 461 439 461 0.98

2 8 7.5e-06 0.00071 20.7 2.9 1 23 467 489 467 489 0.98

3 8 3e-06 0.00028 22.0 0.3 2 23 498 519 498 519 0.98

4 8 9.5e-06 0.0009 20.4 0.6 1 23 525 547 525 547 0.99

5 8 2.2e-07 2.1e-05 25.6 1.8 1 23 553 575 553 575 0.98

6 8 1.1e-05 0.0011 20.2 1.3 3 23 583 603 581 603 0.97

7 8 9.5e-05 0.009 17.3 7.2 1 23 609 631 609 631 0.97

8 8 0.00014 0.014 16.7 0.8 1 22 637 658 637 658 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	9.6e-06	0.00091	20.4	0.1	1	23	439	461	439	461	0.98
2	8	7.5e-06	0.00071	20.7	2.9	1	23	467	489	467	489	0.98
3	8	3e-06	0.00028	22.0	0.3	2	23	498	519	498	519	0.98
4	8	9.5e-06	0.0009	20.4	0.6	1	23	525	547	525	547	0.99
5	8	2.2e-07	2.1e-05	25.6	1.8	1	23	553	575	553	575	0.98
6	8	1.1e-05	0.0011	20.2	1.3	3	23	583	603	581	603	0.97
7	8	9.5e-05	0.009	17.3	7.2	1	23	609	631	609	631	0.97
8	8	0.00014	0.014	16.7	0.8	1	22	637	658	637	658	0.95

Sequence Information

Coding Sequence: ATGTGTGAATGGCTTGCAAGCCGGGAATGGTGCGATGTTCAGCTGCTGTGCGGCGGTCGTGCTTTTAGTGCGCACCGCGCCGTGTTGGCTAGTGCCAGCGCTTATCTCAGGCAAATACTTCTCTCTTGCCCCACAGAAGAAGCCTCGACTTTTATCGTCTTACCAGAGTTCGACATCGAGGCGATGTCCTCCGTCCTTTACTACATTTATAATGGAGAGGTTGTAATACAAAAACAGAAACTAGGAATGTTTCTCGATATTGTAAAAGCTATGCAAATATTTGTCGACAGTCAATATTTGGCGAGAAGCGACATAGAGCATGCCGACTTCAATAAATGCCTAGACCGCGTGTGTATTCAGTCGGGTGCCAGCGCATTGTTCTGTTTGGAAAGTGAAACGCGAAATGGTAAAAATTACGTTAATATAAAGAAAGGTGAAGCGCTTCAGGATATTTTGCGGCGGTGTTCGTTCAGTGAGGGCATTCTGGATTGGCTGAAACCGCGTGAGGGTTTGGAGAGTGATGACAAGTCAGCTTTCGAGGTTTTCTCGCAATTCGGAGACCGACAAAGCAGCGCTTTGCTACGTGAGTTATTTATCGAGACATATCCTGAGTACGGTAACGCTAACGGTCGGTCCGCAGGCGTGCTAGAAATAACAAATGAACGCTATCGTGGACTGACATCTGTGCTCTTGACGAATGCAAATGGCAGTCATCCCGGCGCGGGCTGCGCGCGCGGCGCCCCGACAACATCCCACTCCTCGAACGGACCTCCTTACATAAAAAACGAATGTCACGCAGTGGCATACGATAATTTAAATATAGAGAAGACTATGAAACAAAGAAGTACGAAATCAATTCTCGAAAGATGTCGTAGTGCAGAAAGTAATGGGATGACGACTCTGAACCCTTTCCCGTTTGCACCCTACTTAGATCTCAGGATGGCGGCACTTTTAGACGGTGATAGCGACTTGGTTTTGAAACAGAATGAGAATGTGCCGCTTATAAGCAGTACCAATTATAAATCTTCCGTAAAACACAAAGATATACTCTCAACCAAGCACAAAGGAAAGAAAAATACCATTCTAAATCATGTCTTAGAAAGTCCGTGGTGTCCACGTATACCTAAACCCTATTTGAAGCCCTATTTCTGTAAGAATGTAAAAAGAAATCCAGACTTATTTGAAAATACGGATATGCCGATGGAAGAGAAGCCAGACAATGATAGAAACAACAATGTATCGTTAGTATCCAATGCCGAAGTAAAAGACAGTCTAAGCGTGAAACAGGAATCTACAAGCTCTAACTTTAAAGATTACAGTTGTAATGTTTGTGATCAGGTGTTCCCAAGTGCAGAGGCGCTATCAACCCACGTGAGACGCCACACGACTCCAAGCCGTTACTCCTGCACTGAATGCTCAAAGACCTTCTCCCAACTCCGAAACTTCAAATACCACATGTCAGTCCATAGAGGCACCAGGGAGTTCGCTGCCACTTGTCCTGTATGTGGAAAATACTTCAACGACCGCGGGTATCTCAGCAGTCATATGAAGATACATAGAAATCGGAAAGAGTACAAATGCTCACTCTGTCCAAAATCGTTCAACCAGCGAGTAGCTTACAACATGCACGTGAGAATTCACACAGGTGTGAAGCCTCACGTTTGCGCGGAGTGCGGCAAGGCGTTCTCGCGGAAGATGCTGCTCAAGCAGCATCAGCGTACCCATTCCGGGGAGAGGCCGTACGGGTGCGCGCACTGCGGGAAGCGGTTCGCGGACCGTTCCAACATGACGCTACATCTGCGGCTGCATTCTGGCGTGAAACCGTTCTCCTGCTCGCTGTGTCCGAAGTCTTTCACCAAGAAGCATCACCTCAAGTCCCATCTGAACTTCCACACGGGTGTGAAGCCTTACTCCTGTCCGCGATGCCGTCTGGCTTTCACCCAATCCTCGAATATGAGAACTCACCTCAAGAAGTGTAATGCTCCAACACCGCCGACTCAACTCGTTGAAAATACCTCAATTGAGCCTGTACTAGGTAAAGAAGATCCAGATTCAGTTGTTCCAACAGATCCTTAA
Protein Sequence: MCEWLASREWCDVQLLCGGRAFSAHRAVLASASAYLRQILLSCPTEEASTFIVLPEFDIEAMSSVLYYIYNGEVVIQKQKLGMFLDIVKAMQIFVDSQYLARSDIEHADFNKCLDRVCIQSGASALFCLESETRNGKNYVNIKKGEALQDILRRCSFSEGILDWLKPREGLESDDKSAFEVFSQFGDRQSSALLRELFIETYPEYGNANGRSAGVLEITNERYRGLTSVLLTNANGSHPGAGCARGAPTTSHSSNGPPYIKNECHAVAYDNLNIEKTMKQRSTKSILERCRSAESNGMTTLNPFPFAPYLDLRMAALLDGDSDLVLKQNENVPLISSTNYKSSVKHKDILSTKHKGKKNTILNHVLESPWCPRIPKPYLKPYFCKNVKRNPDLFENTDMPMEEKPDNDRNNNVSLVSNAEVKDSLSVKQESTSSNFKDYSCNVCDQVFPSAEALSTHVRRHTTPSRYSCTECSKTFSQLRNFKYHMSVHRGTREFAATCPVCGKYFNDRGYLSSHMKIHRNRKEYKCSLCPKSFNQRVAYNMHVRIHTGVKPHVCAECGKAFSRKMLLKQHQRTHSGERPYGCAHCGKRFADRSNMTLHLRLHSGVKPFSCSLCPKSFTKKHHLKSHLNFHTGVKPYSCPRCRLAFTQSSNMRTHLKKCNAPTPPTQLVENTSIEPVLGKEDPDSVVPTDP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00209116;
90% Identity: iTF_00209116;
80% Identity: iTF_00208062;