Basic Information

Transcription Factor Domain

TF Family: RHD
Domain: RHD domain
PFAM: PF00554
TF Group: Beta-Scaffold Factors
Description: Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 7.2e-47 4.8e-43 147.9 0.3 13 129 45 163 37 179 0.90

2 2 0.41 2.7e+03 -1.0 0.0 102 123 163 184 160 187 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	7.2e-47	4.8e-43	147.9	0.3	13	129	45	163	37	179	0.90
2	2	0.41	2.7e+03	-1.0	0.0	102	123	163	184	160	187	0.82

Coding Sequence: ATGGTGGCCGCTTTCCATCAGATGAACCATCTGACCGCGCCTCCCTTCTGGCGTCGTATCTCAATGCTGAGGCTCGTGACCCCGCCGGAGCACATTTTCGTGGACTCTTTAGTGGCGCCAAATAGTCTCGTCCTATTCCGCTATGAGTGCGAGGGTCGGTCCGCGGGCTCGATACCGGGCGTCAACAGCACGACTGAGCACAAGACCTACCCCACGATCGAGGTGAGGGGGTACGTGGGGCACGCGATCATCGTGGTCTCCTGCGTGACCAGGGACGAGCCTTACAAACCGCACCCCCACAACCTGGTCGGGAGGGAGCGATGCCGCAACGGCGTCTGCACGATGAAGGTGGACCTGGTGGAGAGTGCGCGGGTCTCCTTCAGCAACCTTGGCATCCAGTGCGTCAAGCGGCGGGACATCGCTGAGGCACTCAACGTGAGGGAGAGCCAGCGCGTGGACCCGTTCAAGAGTTCCCCGGTGCGTAGAAAGGCGGATGACATTGCTGAAGCACTCAAAGTGAGGGAGAGTCAGCGCGTGGACCCGTTCAAGAGTGAGTCTTATAGCTACTGCTTTAGGATACTAATTTTGTTCTACGGTAGGCAAAAAGGCGCGTAA
Protein Sequence: MVAAFHQMNHLTAPPFWRRISMLRLVTPPEHIFVDSLVAPNSLVLFRYECEGRSAGSIPGVNSTTEHKTYPTIEVRGYVGHAIIVVSCVTRDEPYKPHPHNLVGRERCRNGVCTMKVDLVESARVSFSNLGIQCVKRRDIAEALNVRESQRVDPFKSSPVRRKADDIAEALKVRESQRVDPFKSESYSYCFRILILFYGRQKGA

Sequence clustering based on sequence similarity using MMseqs2