Basic Information

Insect: Biston stratarius
Gene Symbol: -
Assembly: GCA_950106695.1
Location: OX467115.1:20692564-20699581[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 8.1 5.9e+02 1.7 0.8 1 23 54 77 54 77 0.89

2 19 4.7 3.4e+02 2.5 3.9 1 23 191 213 191 213 0.97

3 19 0.0018 0.13 13.2 1.0 2 23 219 240 218 240 0.97

4 19 2.3 1.6e+02 3.5 1.5 1 23 246 268 246 269 0.94

5 19 0.18 13 6.9 3.4 2 22 503 523 502 523 0.95

6 19 5.2 3.8e+02 2.3 0.4 1 20 621 640 621 643 0.70

7 19 0.58 42 5.3 0.4 2 23 778 799 777 799 0.96

8 19 0.077 5.6 8.1 1.3 3 23 879 899 878 899 0.98

9 19 0.032 2.4 9.3 0.5 1 23 907 929 907 929 0.97

10 19 0.13 9.4 7.4 3.4 1 23 969 991 969 991 0.95

11 19 0.00025 0.018 15.9 4.0 1 23 999 1021 999 1021 0.99

12 19 4.7 3.5e+02 2.5 1.0 1 23 1183 1205 1183 1205 0.94

13 19 0.048 3.5 8.7 0.1 1 23 1211 1233 1211 1233 0.98

14 19 0.0085 0.62 11.1 1.6 1 23 1299 1321 1299 1321 0.95

15 19 0.015 1.1 10.3 0.9 1 23 1327 1349 1327 1349 0.95

16 19 0.007 0.51 11.4 2.6 1 23 1440 1462 1440 1462 0.97

17 19 0.00018 0.013 16.4 1.4 1 23 1468 1490 1468 1490 0.99

18 19 0.33 24 6.1 2.0 1 23 1582 1604 1582 1604 0.96

19 19 0.0031 0.23 12.5 3.7 1 23 1615 1637 1615 1637 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	8.1	5.9e+02	1.7	0.8	1	23	54	77	54	77	0.89
2	19	4.7	3.4e+02	2.5	3.9	1	23	191	213	191	213	0.97
3	19	0.0018	0.13	13.2	1.0	2	23	219	240	218	240	0.97
4	19	2.3	1.6e+02	3.5	1.5	1	23	246	268	246	269	0.94
5	19	0.18	13	6.9	3.4	2	22	503	523	502	523	0.95
6	19	5.2	3.8e+02	2.3	0.4	1	20	621	640	621	643	0.70
7	19	0.58	42	5.3	0.4	2	23	778	799	777	799	0.96
8	19	0.077	5.6	8.1	1.3	3	23	879	899	878	899	0.98
9	19	0.032	2.4	9.3	0.5	1	23	907	929	907	929	0.97
10	19	0.13	9.4	7.4	3.4	1	23	969	991	969	991	0.95
11	19	0.00025	0.018	15.9	4.0	1	23	999	1021	999	1021	0.99
12	19	4.7	3.5e+02	2.5	1.0	1	23	1183	1205	1183	1205	0.94
13	19	0.048	3.5	8.7	0.1	1	23	1211	1233	1211	1233	0.98
14	19	0.0085	0.62	11.1	1.6	1	23	1299	1321	1299	1321	0.95
15	19	0.015	1.1	10.3	0.9	1	23	1327	1349	1327	1349	0.95
16	19	0.007	0.51	11.4	2.6	1	23	1440	1462	1440	1462	0.97
17	19	0.00018	0.013	16.4	1.4	1	23	1468	1490	1468	1490	0.99
18	19	0.33	24	6.1	2.0	1	23	1582	1604	1582	1604	0.96
19	19	0.0031	0.23	12.5	3.7	1	23	1615	1637	1615	1637	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGCCCTCGCCGCTGAGCGCGCAAGTCGGCGAGGTAACAGCTAACGCGCGCTCCCTCGAAGGCCGCCTCGGGTTGGACGTCTTCTCGGAGGCCTCGTCCGACGCGGCGGAGGATTTTGAATTGCCGCATTGCAAAATAAGGAGAAACTACAACTGTCCGAAGTGCACGTTCTTTACGCAGAATCCGCGAGTTTATCTTTTACACACGCGCGACGTTCACTTTGGAAGATTCAAGATATACGATTGTCAACATTGTATGTATGCTTCGCAACATCATCAGAAGCTCCTGAGACATATGAAGATGGTGCACGGAGGGCTACCCGTGCCCTCGGCGTCCACCGCCAGAGTGGAGGCGGAGCGCCCTACTGCTGCTAGAGCAGAGCCGGAAGTCGATACTTGCAGCCTAGAGAACAACGAACGCATGGAAGATTTACTCGAAGAAATCGAGGAATGTGACGACATACAGATAGACGAGGACGGCGACGATCAGTCCGACAGGATAGAGGACAGCGATCCCAGGGGCACCAACTCCTCCAGACCCAAAGGAAAGGGCAAATTTTTCTCGTGTGACAAATGTAACTACGTCACCCACATAAAGGCGCGATACACGAAGCACGTCAAGTACCACTCGATGCCTATGATCAAATGCACGATGTGTGACTTCCGCACCCCTTACAAATGGAACTTAGATCGTCACATGAAAAACCACGGCGGAACCGGAAGCTTCGTGTGTTCGAAATGCACCTTCACGGCGGATATCAAGCAAAGTCTGACCGTACACGAAATGAATCATCACACGCCTCCGGTGGGGCACGGCGCAAGCCGCCGTCGCAACCGGGTGGGCGCCAGTGACATGATGGCCGCCGACGCGATGGGCGCGCTACTCCCCAAGGAGGAGGAAGGGAGCGCCGACTCGCATTCCTCACACTCGGCCTCGGACATAATGGGTTTACAATACGCAGAGCGTGACATCGTGAGCTGCAATAGCGATTCAAATGACGCTGGGTCGTCGTACGCTGATACGCATCAAGACGGAACGCAGGATGCCCCCGGCCAGCACTCGCCCGACTCTGCGACCGACGACCCGAAGTCACAAAAACAGAGCAGGAAGGCCCCCCGACCGATACCGCAACTCATCCCACTGAACGTGTCTACTCCTAATCAAAAAACATCCGGCGAGCCACCAGCCAAAAAATTCAAGGAATCCACTAGCTCCGATTTAATTGGAAAGTTTGAAAACTTACCGGAAGATATTACTCTGATACCCGTCACTGTGCCTACCAGAGAAACCGCAGTTCGTAAGAAAAACAATTCCTTTTTCGACAAACTTAAAGAAAGACTATTGACTGAAACGGGCGAAGAAGGATCGCTGAAATGCAAAAATTGCGGTTTCGAAAGCAAATGTCTGTCAGAACATTCCGTGCACGAAAAAAATTGTTCCACTCAAGCCAATCGCATTACGATAAACGCGGCTCTTCCAACTAAAGGCTCCACTCGTTGCCAAAACTGTAGACATAGATGTAAATCCAGCGCGGACCTATATGTGCACATGCAGACTTGTAGGAAGAAGGATAATGTTTCAACAGAAACCAACACAACCACAAAGTATAACAATGAAGCTTCCACATCGCAATTAGAAAAAGACACGGAACCGCATCCTATGGAAAACGTTGTTTTCGTTTGGAATAATATCAATCAAGAAACCAACAAATTTGATAGACCTCTGGATATCAATATTAACGACGATTCATCTATTACTGACCTAAATAGACATTACGACACTGAAACTGTGGATGAGAACGAGGGCATGAACTTGTCACCAAATAGCTTGAGTCTCGGCAAGAATGTATACAAATGCCCAGATTGTAAATTTTGGGCAGCCACCGCATCCAGATTTCATGTACATATTGTCGgtcatttaaacaaaaaaccattTGAATGTTCGCTATGCAAATATAAATCTAATTGGCGATGGGATATCACCAAACACATAAAATTGAAATCAGCTAGGGACCCGGAGCACAACGATGCCAAAGTACTAATGACAGATGAAACAGGCAGAAGAAATTACAGCAAGTACAACAAGTTCTTAGCTGTGCCAGTTTTAAATGAAAACGGCGAGAACGAGTTCCACTATATAGATCCAAATACGACAGTAGATGCGTCCATGGAAGTAGATGAATCATACGGCAATGAGTCTACTGACATGATGCATGTGTCGTATGAGATGCAGCCGCTCAACCTGCAAACTCAACCTGTAGACAAATACCATATAGATAATAGAAATATGGACAGTAAAAAGCCTAAGAAGACTCTGTGgaaatgcaaaaagtgcaactataaGGATCCCTCAAAAGAAGCCTTGTTAGACCACGTGAGGCAGCACTCGAGAGAGGGCGGTGACGAAGTTCCTCAAAGTAACAACAAGAAGTTAGAAAATGCTCCCGATCCCGCGGACTTGGCATACCGTTGTGGACACTGTAATCAGCTTTCTAACTGGAAACATGTCATACAgAGACACTGTCGTTTGAAGCACGACGGAATCATCAAAGTTATCACCACAGTGAAACCAAAACCGGATCTTTCGCAAATACCAGGCAACGAATGCACATACAGCGACCTTTGTACGAAGTGTCCATTCAAGgctaacaacaaaaaacaactcCAAGAACATTTGCAACAGCATCAGCCGTCACCGGAATCTATCTTCAAATGCTATTTCTGTCCTTACTTTGTCAAAGATGAACAAGATTTGATTCAGCATCTTTTGTTACACGGTATAACCGACCCAGAGGATTATATCTCTAAAGCCATGGGATGCAGATCTCCATTGCCAGATCGAATTCTTACAAACTCTGATATACCGATACCATCGAGTAGTGCAACGAAACGCCACAAATGTACTGAATGCCCATACGAAACAAACAGCAAATCTCAATACATGTATCATGAACAATTCCATAGACTGCCGGCAGACACCCCCTATAAGTGCCCAGAGTGCAATTATAGTGTATCAAAGAGACATTTACTTCATCAACATCTGAGAGTACACGGAATCCATCCATCATCTGATCGAAAGAAAAATGAGTCAGAAGCGGAGTTAGAAGCTAATTCTGCTTGTCAAAACAAATTTGACGGTAAATCAGACTTTGCAGATGATATTCCCTTTGTTTGGGTTTCGGCGAGGAATGAATTTCACAAAATGTACAAGTGTCGCTATTGCTCATATGTCAACTCTCAGAAATGTAAGTTACCAAACCATGAAAAGATTCATTGCCTGGAATTTGAAAATAGCGATGTTATCATTTACAAATGTTTAGAATGTAAATTCACATGTGATGATCCTGAGAAAGGTGCAGAACATTCCAAGAAGCACGGCCTTTTGTATGGTCGCATCTATAGTTATGTAGAAGATGATATTCCAGACGAAGACCAAATCGCTAAACTACGCAGGATCATAGAACAAGAAAAGGCTGTTGAAGAATCAATAAAAGACGAGACTGCAACAGCTGATTCaccagaaaataaaattatgttttactgCCGGAAATGTCCCGCCAATTACttcaatgaaaatgaaattaaagtCCATGAAAAGTTCCATGACCGTACGTTGGAATACAAGTGTAAAATCTGTGAGTTTTCAGTGTCAGAAGAATTAGAATTGATGGCTCACGAAAATGTGCATTCAGACGATTATCATATTAGGACAAATATGCATAAATTCGTTCATAACTACCACTCGCTTTACAAGCCACCTCGACTAGAATCTATACGTAGTCCTGAATCTTTAGAATTATCGTGGATTGCTGTGGCAAACAAGCCTGTTGAACACATAGAGCATATTCATAAGAAATCTGAATCGAAACACACAGCAAAGCAATATCATTGCAAGGAGTGTCCAGctaagttttttaaaagttcAGCGCTCTCATACCACATGGGGTTGCATGGTGGGGAAGGCGAACACAAATGCAAAAAATGCAGTTATGCTGTCAAGAACGTTGGCAACTTAGCCAAACATGAAATATTGCATGAAATCGAAAATAAACCATCAGATCGCTGTGACTATGATTCTGGTGAAGACATAGATTACAAAAATGTCCCCATATCCGGTACAGATTTATTCCAACGAAAGACTGAAGCGATTAAAAGAGTATTGATTGACAAAGATAAACTAGTGAGACCAAACGATCACTTTCCACCTGTGCTACAAGCCGACCCACAGTTCGGTTACCTCATGCATGGTAATCCTGAATTTATTTACCCTACATATTTGAAAAATGgacgccaaaaagaaaaaagatataaatGCCACAAATGCCCATCCGCTTTCGAGAAAAGAGAACAATATAAGATACACCTATCTCTCCACGGCTCCAAACAAAGATACAAGTGCGAACTATGCGACTATTCTGTAAAATATTACGCAAATTACGTGCAGCACATGAGAAAACATCAAATGAATGATGAAGCTCAAGCCGAGAGGAAGAAGGGTAACTGTGGTTTTACTGAGACTGAAGAGAATCAAGATGAGAAAAAAGACGATAGCGGAGACAATATCAAATTAGCGATCAAAACGATGCCCAAAGGAGCGCCTAAGACAGATTTCCAGCAATTTTCAATTCGGGATCAACAAACTTTGAGACTGTTACAACGGAGAAGATCTATGAATGCCGGCGGCAAAGATGCAGGCTCCAACGAAACCTCGCCAGTAAAAGAACGCAAATTGCATATGTGTCTACTGTGCCCATACACCAACCAACGACAAGACGCACTGAACAATCACTACAGGAGACACGATGCAGCCGATATTCTTAATATTGGAAACCATAAATGCTCTTATTGCGACCTAGTCGTTGTTCAGTCACATTTCTTACGTGACCATTTAAAAACCCATTTCAGTTATCATAAAACTCTGACCCCTGAATGTTTCGTAGCTAATGAAAACGTGACTTTCACTATCAGCAGAATTGATGGAGAAAGTGAACCCATTGATCTCAAATTAGATGTAAAAAGCAAAATTATATTCAATGATGATAAagtgtttgtaaatataaaaactggCGAAGTTGTCGTAGAATAG
Protein Sequence: MLQQMPSPLSAQVGEVTANARSLEGRLGLDVFSEASSDAAEDFELPHCKIRRNYNCPKCTFFTQNPRVYLLHTRDVHFGRFKIYDCQHCMYASQHHQKLLRHMKMVHGGLPVPSASTARVEAERPTAARAEPEVDTCSLENNERMEDLLEEIEECDDIQIDEDGDDQSDRIEDSDPRGTNSSRPKGKGKFFSCDKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFVCSKCTFTADIKQSLTVHEMNHHTPPVGHGASRRRNRVGASDMMAADAMGALLPKEEEGSADSHSSHSASDIMGLQYAERDIVSCNSDSNDAGSSYADTHQDGTQDAPGQHSPDSATDDPKSQKQSRKAPRPIPQLIPLNVSTPNQKTSGEPPAKKFKESTSSDLIGKFENLPEDITLIPVTVPTRETAVRKKNNSFFDKLKERLLTETGEEGSLKCKNCGFESKCLSEHSVHEKNCSTQANRITINAALPTKGSTRCQNCRHRCKSSADLYVHMQTCRKKDNVSTETNTTTKYNNEASTSQLEKDTEPHPMENVVFVWNNINQETNKFDRPLDININDDSSITDLNRHYDTETVDENEGMNLSPNSLSLGKNVYKCPDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAVPVLNENGENEFHYIDPNTTVDASMEVDESYGNESTDMMHVSYEMQPLNLQTQPVDKYHIDNRNMDSKKPKKTLWKCKKCNYKDPSKEALLDHVRQHSREGGDEVPQSNNKKLENAPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDLSQIPGNECTYSDLCTKCPFKANNKKQLQEHLQQHQPSPESIFKCYFCPYFVKDEQDLIQHLLLHGITDPEDYISKAMGCRSPLPDRILTNSDIPIPSSSATKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIHPSSDRKKNESEAELEANSACQNKFDGKSDFADDIPFVWVSARNEFHKMYKCRYCSYVNSQKCKLPNHEKIHCLEFENSDVIIYKCLECKFTCDDPEKGAEHSKKHGLLYGRIYSYVEDDIPDEDQIAKLRRIIEQEKAVEESIKDETATADSPENKIMFYCRKCPANYFNENEIKVHEKFHDRTLEYKCKICEFSVSEELELMAHENVHSDDYHIRTNMHKFVHNYHSLYKPPRLESIRSPESLELSWIAVANKPVEHIEHIHKKSESKHTAKQYHCKECPAKFFKSSALSYHMGLHGGEGEHKCKKCSYAVKNVGNLAKHEILHEIENKPSDRCDYDSGEDIDYKNVPISGTDLFQRKTEAIKRVLIDKDKLVRPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGNCGFTETEENQDEKKDDSGDNIKLAIKTMPKGAPKTDFQQFSIRDQQTLRLLQRRRSMNAGGKDAGSNETSPVKERKLHMCLLCPYTNQRQDALNNHYRRHDAADILNIGNHKCSYCDLVVVQSHFLRDHLKTHFSYHKTLTPECFVANENVTFTISRIDGESEPIDLKLDVKSKIIFNDDKVFVNIKTGEVVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00790785;
90% Identity: iTF_00143522;
80% Identity: -