Basic Information

Insect: Apocheima hispidaria
Gene Symbol: -
Assembly: GCA_947579745.1
Location: OX388147.1:11893782-11901037[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 2.4 1.5e+02 3.4 6.2 1 23 84 107 84 107 0.97

2 19 4.5 2.8e+02 2.5 3.9 1 23 193 215 193 215 0.97

3 19 0.0017 0.11 13.2 1.0 2 23 221 242 220 242 0.97

4 19 2.2 1.4e+02 3.5 1.5 1 23 248 270 248 271 0.94

5 19 0.18 11 6.9 3.4 2 22 505 525 504 525 0.95

6 19 5 3.1e+02 2.3 0.4 1 20 623 642 623 645 0.70

7 19 0.55 34 5.4 0.4 2 23 780 801 779 801 0.96

8 19 0.077 4.9 8.0 1.0 3 23 881 901 880 901 0.98

9 19 0.031 2 9.3 0.5 1 23 909 931 909 931 0.97

10 19 0.12 7.8 7.4 3.4 1 23 971 993 971 993 0.95

11 19 0.00024 0.015 15.9 4.0 1 23 1001 1023 1001 1023 0.99

12 19 0.96 61 4.6 1.0 1 23 1185 1207 1185 1207 0.95

13 19 0.1 6.3 7.7 0.0 1 23 1213 1235 1213 1235 0.96

14 19 0.0082 0.51 11.1 1.6 1 23 1301 1323 1301 1323 0.95

15 19 0.014 0.91 10.3 0.9 1 23 1329 1351 1329 1351 0.95

16 19 0.0068 0.43 11.4 2.6 1 23 1442 1464 1442 1464 0.97

17 19 0.00017 0.011 16.4 1.4 1 23 1470 1492 1470 1492 0.99

18 19 0.32 20 6.1 2.0 1 23 1584 1606 1584 1606 0.96

19 19 0.0028 0.18 12.6 3.7 1 23 1617 1639 1617 1639 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	2.4	1.5e+02	3.4	6.2	1	23	84	107	84	107	0.97
2	19	4.5	2.8e+02	2.5	3.9	1	23	193	215	193	215	0.97
3	19	0.0017	0.11	13.2	1.0	2	23	221	242	220	242	0.97
4	19	2.2	1.4e+02	3.5	1.5	1	23	248	270	248	271	0.94
5	19	0.18	11	6.9	3.4	2	22	505	525	504	525	0.95
6	19	5	3.1e+02	2.3	0.4	1	20	623	642	623	645	0.70
7	19	0.55	34	5.4	0.4	2	23	780	801	779	801	0.96
8	19	0.077	4.9	8.0	1.0	3	23	881	901	880	901	0.98
9	19	0.031	2	9.3	0.5	1	23	909	931	909	931	0.97
10	19	0.12	7.8	7.4	3.4	1	23	971	993	971	993	0.95
11	19	0.00024	0.015	15.9	4.0	1	23	1001	1023	1001	1023	0.99
12	19	0.96	61	4.6	1.0	1	23	1185	1207	1185	1207	0.95
13	19	0.1	6.3	7.7	0.0	1	23	1213	1235	1213	1235	0.96
14	19	0.0082	0.51	11.1	1.6	1	23	1301	1323	1301	1323	0.95
15	19	0.014	0.91	10.3	0.9	1	23	1329	1351	1329	1351	0.95
16	19	0.0068	0.43	11.4	2.6	1	23	1442	1464	1442	1464	0.97
17	19	0.00017	0.011	16.4	1.4	1	23	1470	1492	1470	1492	0.99
18	19	0.32	20	6.1	2.0	1	23	1584	1606	1584	1606	0.96
19	19	0.0028	0.18	12.6	3.7	1	23	1617	1639	1617	1639	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCTGAGCGCGCAAGTCGGCGAGGTCACAGCTATCGCGCGCCCCCTCGAAGGCCGCCTCAGCTTGGACGTCCTCTCAGAGGCATCGTCCGACACGCCGGAAGATTTCGAATTGCCGCATTGCAAGATAAGAAGGAACTACAACTGTGTGAAGTGCACGTTCTATACGCAGAACCCGCGAGCTTATCTTTTGCACACGCGCGACGTTCATTTCGGAAGATTCAAGATATACGATTGTCAACATTGTTTGTATGCATCGCAACACCATCAGAAGCTCCTGAGACATATGAAGATGGTACACGGAGGATTACCTGCGCCCTCGGCGTCGAGCGCCAGACTAGAATTGGAGCGCCCCGTCGTCGCCGCCAGAGCTGAGCCTGAGCCTGTCGCTCCTGTCAGTCCCGAGAACAACGAGCGTATGGAGGATTTACTCGAAGAAATCGAAGAATGCGACGATGTACAGATAGATGAAGACGGCGATGATCAGTACGACCGAATGGATGACAGCGACCCCAGGAACGCTAACTCCTCCAGACCCAAAGGAAAGGGCAAATTTTTCTCGTGCGACAAATGTAACTACGTAACCCATATAAAGGCGCGATACACGAAGCACGTCAAGTACCACTCGATGCCGATGATCAAGTGCACGATGTGCGACTTCCGCACTCCGTACAAATGGAATCTGGATCGTCACATGAAGAATCACGGTGGGACCGGAAACTTCGTGTGTTCCAAGTGCACCTTCACGGCGGATATCAAACAGAGTCTGACCGTACACGAAATGAATCATCACACGCCGCCGGTGGGGCACGGCGCGAGCCGCCGCCGCAACCGGGTGGGCGCCAGTGACATGACGGCCGCCGACTCGATGGGCGCGCTGCTCCCCAAGGAGGAGGAAGGGAGCGCCGACTCGCACTCCTCACACTCGGCCTCGGACATGATGGGCTTGCAATACGCTGAGAGGGATATAGTGAGCTGCAACAGCGATTCAAACGATGCGAGCTCGTCGCACGCCGACGCGCACCGAGACGGAACGCAGGACGCCCACGGGCAGCACTCACCCGGCTCCGCGACCGATGACACGAGGTCACAAAAACAGAGCAGGAAGGCCCCCCGGCCAATACCGCAACTCATCCCGCTGAACGCGTCTACTCCCAATCAAAAAACATCCGGTGAGCCGCCGGCCAAAAAGTTCAAAGAATCCACGAACTCCGAATTAATCGGAAAGTTTGAAAATTTACCGGAAGATATCACTTTGATACCCGTCAATGTGCCCGCCAAAGAAACCACAGTGCGCAAGAAAAACAATTCCTTTTTCGACAAACTAAAAGAAAGGCTTTTGACTGAAACGGGCGAAGAAGGGTCGCTGAAATGCAAAAATTGTGGTTTCGAAAGCAAATGCCTGTCGGAGCATTCCGTGCACGAGAAAAACTGTTCCACTCAGGCCAATCGCATTACGATGAGCGCGGCGCTTCCTACTAAAGGCTCCACTCGCTGCCAAAACTGTAGACATAGATGTAAATCGAGTGCAGACTTGTATGTGCACATGCAGACCTGTGGGAAGAAAAATAGTGTTGCTACCGAAACTGTCACACATAACAAATATAACAACGAAGCCTCGACATCACAACTTGAAAAGGAAGCGGAACCACATCCCATGGAAAACGTTGTTTTCGTCTGGAATAATATCAATCAGGAGACAAGCAAATTCGAAAGACCTTTAGATATCAACATCAACGACGATTCAACAATTACTGACCTAAATAGACATTACGACACCGAAACTGTGGACGAGAATGAGGGCATGAACTTGTCACCGAATAGTTTGAGCCTCGGCAAGAACGTTTACAAATGCCCAGATTGTAAGTTTTGGGCTGCCACCGCATCCAGATTTCATGTGCATATCGTCGGCCACTTGAACAAAAAACCGTTCGAATGTTCTTTATGCAAATACAAGTCCAATTGGCGATGGGATATCACCAAACACATAAAGCTAAAATCGGCGAGAGACCCGGAACACAACGACGCCAAAGTACTAATGACAGATGAAACCGGCAGAAGAAATTACAGCAAGTACAACAAATTCTTAGCTGTGCCAGTTTTAAATGAAAATGGCGAGAACGAGTTCCACTACATAGATCCAAACACGACAGTGGATGCGTCCATGGAAGTAGATGAATCATATGGCAATGAATCGACTGACATGATGCACGTGTCGTATGAGATGCAGCCGCTCAATTTGCAGACTCAATACACTGATAAATATAACATGGACAATAGCAATATGGATCATAAAAAGCCTAAGAAGACCTTGTGGAAATGCAAAAAGTGCAACTACAAGGATCCATCAAAAGAAGCATTATTAGAGCACGTCAGGCAGCACTCGAGAGACGGCGGAGACGATACTCCTCAAAGTAATAACAAGAAGCTCGAAAATGCTCCTGATCCCGCCGACTTGGCATACCGTTGTGGGCATTGCAATCAGCTTTCAAACTGGAAACACGTCATACAGAGGCACTGCCGTTTGAAGCACGACGGAATCATCAAAGTCATCACTACAGTGAAACCAAAACCGGATCTGTCTCAAATACCAGGCAACGAAGGCGTATACACCGACCTTTGTACGAAGTGCCCTTTTAAGGCCAACGACAAAAAACAACTCCAAGAACATTTGCAACAACATCAGCCGTCACCGGAATCTATCTTTAAATGCTATTTCTGCCCTTATTTTGTCAAAGATGAACAAGACTTGATCCAGCATCTCTTGTTACACGGAATAACTGACCCAGAAGATTATATCTCTAAAGCGATGGGATGCAGATCTCCATTACCGGACCGAGTTCTCACGAACTCCGATGTACCAGCGCCATCGAGTAGTACAACGAAACGTCATAAATGTACTGAATGTCCTTACGAAACAAACAGCAAATCTCAATACATGTATCATGAACAATTTCACAGGCTTCCGGCAGACACACCCTACAAGTGCCCAGAGTGCAATTACAGCGTATCAAAGAGACATTTACTTCACCAACACTTGAGAGTACACGGAATTCATCCATCAGCGGATCGGAAGAAAAATGAGTCAGAAGCAGAATTGGAAGCTAATGCGGCTTGTCAAAGCAAACTAGACGGTAAATCAGACTTTGCAGATGATATACCTTTTGTTTGGGTTTCGGCGAGGAATGAATTCCATAAAATGTACAAGTGTCGCTATTGCTCTTATGTCAACTCCCAGAAGTGTAAATTACCAAACCATGAAAAAATTCATTGCCTGGAATTCGAAAATAGTGACGTTATCATTTACAAATGTTTAGAATGTAAATTCACATGTGATGACCCTGAAAAGGGAGCGGAACATTCTAAAAAACACGGCCTGTTGTACGGTCGCATCTACAGCTATGTAGAAGACGAGATTCCAGATGAGGACCAAATAGCAAAATTACGCAGAGTCATTGAACACGAAAAAGCTGCGGAAGAATCTACAAAAGACGATACCGCGACACCCGACCCACCTGAAAATAAAATTATGTTTTACTGTCGGAAATGTCCAGCCAATTATTTCAATGAAAGTGAAATAAAAGTCCATGAGAAGTTTCATGACCGTACGTTAGAATACAAATGTAAAATATGTGAATTCTCAGTGCCAGAAGAGACAGAATTGGCGGCTCATGAAACTGTGCATTCGGACGATTATCATGTCAGGACAAATATGCATAAATTCGTTCATAATTACCACTCACTTTACAAGCCACCTCGACTGGACTCTATCCGTAATTCCGAATCTTCAGAAATATCCTGGATTGCAGTACCAAACAAACCTGTCGAACACGCGGAACTTGTTCATAAGAAATCAGAATCAAAACATACACCGAAACAATATCATTGCAAAGAATGCCCAGCCAAATTTTTCAAAAGTTCTGCTCTCTCATACCACATGGGGTTGCATGGTGGAGAAGGCGAACATAAATGCAAAAAATGCAGTTATGCTGTTAAAAATGTTGGTAATTTAGCCAAACATGAAATATTGCACGATATTGAAAACAAACCGTCCGATCGTTGCGATTATGACTCAGGTGAAGATATGGATTACAAAAATGTTCCTCTCTCTGGGACAGATTTATTCCAAAGAAAGACTGAAGCAATAAAAAGAGTATTGACTGACAAAGACAAACTGGTCAGACCAAACGACCATTTTCCACCCGTGCTCCAAGCTGATCCACAGTTCGGATACCTTATGCATGGTAATCCCGAATTTATTTACCCTACATATTTGAAAAATGGACGTCAAAAAGAAAAAAGATATAAATGCCACAAATGCCCATCAGCTTTCGAAAAGAGGGAACAATACAAGATACATTTATCCCTCCACGGCTCGAAACAAAGATACAAATGCGAATTGTGCGACTATTCTGTTAAGTATTACGCTAATTACGTGCAACACATGAGGAAACATCAAATGAATGATGAAGCTCAAGCCGAAAGGAAGAAGGGTAATAGTGATTTTACCGAACCTAATAACCAAGAAGACGAGAAAAAAGACGATAGCGCGGATAACATAAAATTAGCTATCAAAACAATGCCTAAAGGCGCGCCGAAGACAGATTTCCAGCAGTTCTCAATTAGAGACCAGCAAACTCTGAGACTAATGCAGCGAAGGAGGTCTATGAATGCAGGCGGCAAAGACTCGGCCTCAAACGAAACCTCGCCGGCAAAAGAGCGCAAGTTGCACATGTGTCTCCTATGCCCGTACACCAACCAACGACAGGACGCCTTGAATAACCACTACAGAAGACACGATGCCGCCGATATTCTCAATATCGGAAACCATAAATGCTCTTACTGCGACCTAGTCGTCGTTCAATCACATTTCCTACGTGAACATTTAAAAACTCATTTCAGTTATCACAAAACTCTGACCCCTGAATGTTTCGTAGCTAATGAAAACGTGACTTTTACTATCAGCAAAGTTGATGAAGAAAGTGAACCTCTTGATCTCAAATTAGACGTGAAAAGCAAAATTATATTTAATGAGGACAAAATGTTTGTAAATATCAAATCCGGCGAAGTTATCGTGGAGTAG
Protein Sequence: MLQQMSSPLSAQVGEVTAIARPLEGRLSLDVLSEASSDTPEDFELPHCKIRRNYNCVKCTFYTQNPRAYLLHTRDVHFGRFKIYDCQHCLYASQHHQKLLRHMKMVHGGLPAPSASSARLELERPVVAARAEPEPVAPVSPENNERMEDLLEEIEECDDVQIDEDGDDQYDRMDDSDPRNANSSRPKGKGKFFSCDKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGNFVCSKCTFTADIKQSLTVHEMNHHTPPVGHGASRRRNRVGASDMTAADSMGALLPKEEEGSADSHSSHSASDMMGLQYAERDIVSCNSDSNDASSSHADAHRDGTQDAHGQHSPGSATDDTRSQKQSRKAPRPIPQLIPLNASTPNQKTSGEPPAKKFKESTNSELIGKFENLPEDITLIPVNVPAKETTVRKKNNSFFDKLKERLLTETGEEGSLKCKNCGFESKCLSEHSVHEKNCSTQANRITMSAALPTKGSTRCQNCRHRCKSSADLYVHMQTCGKKNSVATETVTHNKYNNEASTSQLEKEAEPHPMENVVFVWNNINQETSKFERPLDININDDSTITDLNRHYDTETVDENEGMNLSPNSLSLGKNVYKCPDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAVPVLNENGENEFHYIDPNTTVDASMEVDESYGNESTDMMHVSYEMQPLNLQTQYTDKYNMDNSNMDHKKPKKTLWKCKKCNYKDPSKEALLEHVRQHSRDGGDDTPQSNNKKLENAPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDLSQIPGNEGVYTDLCTKCPFKANDKKQLQEHLQQHQPSPESIFKCYFCPYFVKDEQDLIQHLLLHGITDPEDYISKAMGCRSPLPDRVLTNSDVPAPSSSTTKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIHPSADRKKNESEAELEANAACQSKLDGKSDFADDIPFVWVSARNEFHKMYKCRYCSYVNSQKCKLPNHEKIHCLEFENSDVIIYKCLECKFTCDDPEKGAEHSKKHGLLYGRIYSYVEDEIPDEDQIAKLRRVIEHEKAAEESTKDDTATPDPPENKIMFYCRKCPANYFNESEIKVHEKFHDRTLEYKCKICEFSVPEETELAAHETVHSDDYHVRTNMHKFVHNYHSLYKPPRLDSIRNSESSEISWIAVPNKPVEHAELVHKKSESKHTPKQYHCKECPAKFFKSSALSYHMGLHGGEGEHKCKKCSYAVKNVGNLAKHEILHDIENKPSDRCDYDSGEDMDYKNVPLSGTDLFQRKTEAIKRVLTDKDKLVRPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGNSDFTEPNNQEDEKKDDSADNIKLAIKTMPKGAPKTDFQQFSIRDQQTLRLMQRRRSMNAGGKDSASNETSPAKERKLHMCLLCPYTNQRQDALNNHYRRHDAADILNIGNHKCSYCDLVVVQSHFLREHLKTHFSYHKTLTPECFVANENVTFTISKVDEESEPLDLKLDVKSKIIFNEDKMFVNIKSGEVIVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00790785;
90% Identity: iTF_00206636; iTF_00666965; iTF_00207484;
80% Identity: -