Basic Information

Insect: Biston stratarius
Gene Symbol: PLAGL2
Assembly: GCA_950106695.1
Location: OX467113.1:22963400-22965058[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00031 0.023 15.6 1.0 1 23 143 165 143 165 0.96

2 7 8.1e-05 0.0059 17.5 1.5 1 23 171 193 171 193 0.96

3 7 3.7e-08 2.7e-06 28.0 1.9 1 23 199 221 199 221 0.97

4 7 0.0036 0.26 12.3 0.7 1 23 228 252 228 252 0.94

5 7 2.7e-05 0.002 19.0 0.4 2 23 260 281 259 281 0.97

6 7 0.00014 0.0099 16.8 1.3 1 23 295 317 295 317 0.97

7 7 1.5e-05 0.0011 19.8 1.1 1 23 323 346 323 346 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00031	0.023	15.6	1.0	1	23	143	165	143	165	0.96
2	7	8.1e-05	0.0059	17.5	1.5	1	23	171	193	171	193	0.96
3	7	3.7e-08	2.7e-06	28.0	1.9	1	23	199	221	199	221	0.97
4	7	0.0036	0.26	12.3	0.7	1	23	228	252	228	252	0.94
5	7	2.7e-05	0.002	19.0	0.4	2	23	260	281	259	281	0.97
6	7	0.00014	0.0099	16.8	1.3	1	23	295	317	295	317	0.97
7	7	1.5e-05	0.0011	19.8	1.1	1	23	323	346	323	346	0.94

Sequence Information

Coding Sequence: ATGGCCAGTTCGCCACCGAACCCTAGAGAAGGAGAGGAGCTCGGAGCCACCTCCGAGCCCGCGGAGACGGGCGGGCAGAGCGCGTCCGCCGCGCAGAAGAGATTCATAGCGCCGCCCGCGTCGCAGGTGCCCTCAAGGCTGCATTTCGTGTCGCTGGGTCCTAGCGGGCCCGCCGGCGTCAAGTCCACCTTCCGCACGGTGAAGGTGGCGCGCCGCGTCCCTACGCTGCCGCGCAAGCTGTCGCCGGCAGCGGGGCCGGCTGTCGGCGCGTCCACGACGGCTGCAGGCGCGTCCACAGCGGCCGCCGGCACGTCCACGGCGGCCGCCGGCGCGTCCACGGTCGCTGCCGGCGCGTCCACGTCGGCTGCGCCGCCCGCGCCTCCGCCCGAGCCGCCGCGCCGCACTCGTCGAGACCAGGCCAAGCGCCACGCCTGTGACACCTGTGCGAAACGATTCACCAGCCCGGGGAAACTCAGCCAGCACCTCCTCTCGCACACCGGTGAGCTACCCTTCCCATGCGAATTTTGCGATAAACGATTCAATTCTAAATTTAAGCTTGCACGCCACAACCTCATACACAGCGAAGCGAGGGCCTTCGCTTGCAATGTGTGTGGAAAAACTTTTAACCGCAAAGATCATCTCACTAATCATGTTCGAGTGCACAATCCTGTCAAAAAGCTTTATACTTGTGAGAAACCTGATTGCAGAAAGTCTTACACCTCACTGATGAGCTATCGAAAACATGCAGCTTTGCATTCTGTCGAAGAAGGAAACTTGCAATGTAAAATATGTGATAAAGTCTTTACTAATCGTCAAGATATTGTTTATCATTTAAAGATCCATACAGGTAGTCGGACTGTAAAGAATGAAACTGACAAAAAGTTTACATGCAACTATTGTGAGCGAAGGTTTTTCACGGCGAAGGATGTGCGGCGACACCTGGTAGTGCATACGGGGAGACGTGACTTCTTGTGTCCTTATTGCCCCCAAAAGTTTGGGCGAAAAGACCACCTGGTGAGGCATGTCAAGAATGCACATCCCGATGAGTCTTGGCGGTCTGCAGCTGTTGGTACCTCTAGCGAACCTACGCCCGAGGCGTCTGCTTTTGAAGAGACTTACACGACAGAATTCTCGATAGAGGGTACCGATTATACTATTTGGAAACCTGAAGAGTCTTCTGAAGAGTCGAAACCCGTGCGAACGCCTGTACCTTCGTCAGAGATCATCGTAGAGATGCCATCTGAGCTCAACATCAAAATGGAGCCTGGAGCAGACTTAGATGTAAAAGTAGAAGGTGGAGATCCTTTAGAGGTAAAGTTAGAACAGCCACCGTCGCCAAGTTGTGCCCTGTACCCTCTTGTGTATGTAGTACCTCAATACCAGCCGCCGGCCAACTTGCCTTACATCACGGAGGAGTTACCAGACACAATAGAGGCGCATTTACTTGACCCCAGCGTTGAGCTTTATGACCCGGGTGCAGGGCCTTCGGGGTTATCGACTCAGGTGCTTCGAGGCCTGCTTGAAGAACCAGAGTCGACATACCCGGCTGAAGAGAGCGGGAGCGGCACGCGGTCGCAGCAGCGTCTGCCAGCGTTCACGCAAGCTTTCCAGACCGCCCAAAGCTCGAAGCCGCCGGCGCCCCCACCCCCGCCACACTAA
Protein Sequence: MASSPPNPREGEELGATSEPAETGGQSASAAQKRFIAPPASQVPSRLHFVSLGPSGPAGVKSTFRTVKVARRVPTLPRKLSPAAGPAVGASTTAAGASTAAAGTSTAAAGASTVAAGASTSAAPPAPPPEPPRRTRRDQAKRHACDTCAKRFTSPGKLSQHLLSHTGELPFPCEFCDKRFNSKFKLARHNLIHSEARAFACNVCGKTFNRKDHLTNHVRVHNPVKKLYTCEKPDCRKSYTSLMSYRKHAALHSVEEGNLQCKICDKVFTNRQDIVYHLKIHTGSRTVKNETDKKFTCNYCERRFFTAKDVRRHLVVHTGRRDFLCPYCPQKFGRKDHLVRHVKNAHPDESWRSAAVGTSSEPTPEASAFEETYTTEFSIEGTDYTIWKPEESSEESKPVRTPVPSSEIIVEMPSELNIKMEPGADLDVKVEGGDPLEVKLEQPPSPSCALYPLVYVVPQYQPPANLPYITEELPDTIEAHLLDPSVELYDPGAGPSGLSTQVLRGLLEEPESTYPAEESGSGTRSQQRLPAFTQAFQTAQSSKPPAPPPPPH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01209629;
90% Identity: iTF_00206378;
80% Identity: -