Basic Information

Insect: Biston stratarius
Gene Symbol: -
Assembly: GCA_950106695.1
Location: OX467120.1:2733964-2744443[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.044 3.2 8.9 0.8 1 23 71 93 71 93 0.95

2 16 4.7 3.4e+02 2.5 0.0 5 23 125 144 122 144 0.92

3 16 0.0031 0.23 12.5 0.2 2 23 165 187 164 187 0.95

4 16 0.00025 0.018 15.9 2.6 2 23 193 215 192 215 0.95

5 16 0.021 1.5 9.9 0.8 1 23 220 243 220 243 0.92

6 16 0.28 20 6.3 0.4 2 23 246 268 245 268 0.92

7 16 0.0093 0.68 11.0 0.5 2 22 275 295 274 295 0.93

8 16 0.00014 0.011 16.7 0.8 1 23 353 376 353 376 0.93

9 16 7.2 5.2e+02 1.9 0.1 3 23 405 426 403 426 0.88

10 16 0.033 2.4 9.2 0.2 3 23 450 472 449 472 0.95

11 16 4e-05 0.0029 18.4 2.6 3 23 479 499 477 500 0.94

12 16 0.0095 0.69 11.0 0.8 1 23 505 528 505 528 0.97

13 16 0.00092 0.067 14.1 0.2 2 23 534 556 534 556 0.92

14 16 3.1e-05 0.0022 18.8 4.7 1 23 560 583 560 583 0.97

15 16 0.00013 0.0096 16.8 0.6 2 23 590 611 589 611 0.96

16 16 0.0049 0.36 11.9 3.1 1 23 617 639 617 639 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.044	3.2	8.9	0.8	1	23	71	93	71	93	0.95
2	16	4.7	3.4e+02	2.5	0.0	5	23	125	144	122	144	0.92
3	16	0.0031	0.23	12.5	0.2	2	23	165	187	164	187	0.95
4	16	0.00025	0.018	15.9	2.6	2	23	193	215	192	215	0.95
5	16	0.021	1.5	9.9	0.8	1	23	220	243	220	243	0.92
6	16	0.28	20	6.3	0.4	2	23	246	268	245	268	0.92
7	16	0.0093	0.68	11.0	0.5	2	22	275	295	274	295	0.93
8	16	0.00014	0.011	16.7	0.8	1	23	353	376	353	376	0.93
9	16	7.2	5.2e+02	1.9	0.1	3	23	405	426	403	426	0.88
10	16	0.033	2.4	9.2	0.2	3	23	450	472	449	472	0.95
11	16	4e-05	0.0029	18.4	2.6	3	23	479	499	477	500	0.94
12	16	0.0095	0.69	11.0	0.8	1	23	505	528	505	528	0.97
13	16	0.00092	0.067	14.1	0.2	2	23	534	556	534	556	0.92
14	16	3.1e-05	0.0022	18.8	4.7	1	23	560	583	560	583	0.97
15	16	0.00013	0.0096	16.8	0.6	2	23	590	611	589	611	0.96
16	16	0.0049	0.36	11.9	3.1	1	23	617	639	617	639	0.97

Sequence Information

Coding Sequence: ATGGCATCCACGTCGGAGCCAAAACCAAAGCGTGGCAGGCCCCGGAAAGACGACATCAAACCTGAGCCAAAAGCGAAGAGACAGAAACTTTCTAAAGGTGTTAAAACGCGGAAATACAAAGGAACAGAGTCCTTGTCAACGCGTAGAAGGAGAAACCTACAGATTCTCTTCAACAACACTTCTATTATACCTTTTAAGTGGAGAGGAAAATATCTTTGCTTCTATTGCAGCAAGGATGTCTCAGAATACGTGGCACTGCGGAAACATACAAAACTTCATGGCGATTGCTCTATTCTCGATCATTCGTTGAAAGCTCTCAAAGGTGGAACGAATATGGAGATCAAAATAGACGTTTCAAACCTTGCTTGCATATTATGCGGTGAGCAATATCCTTCTTTAGTTGAAATAATAACACATCTTGAAACTAAACATAAACTAGAATATGATAAAAACGTAGACATGGCTATAGAAGAATATAGACTAGTAGATTTAAATTGTCTCATTTGTGAAGAAACGTTTTCCTATTTTGGATATTTGGTCTCACACGTGAACACAAATCATCCGAAAAACTGCCTCATATGCGATAAATGTAACCAGAAGTTTAATAAGAAACGCGATCTTTTCTCGCATATGAAGAATTATCATAGAGAAGGCGGGTACCCATGCGAAATTTGTCGACAGACTTTCAACTCTCTTAATATACTCCGAAAGCATAAAATTAATAGACATTTGACTAGATGCCATATCTGTCAACTTAGGTTACCCTCGGCAGCATTGCGGCAAAAGCATATAGACTTGGAACACCCTGATGACGGGTCTCTTCAGTGCGACGCTTGCGACAAAGAATTTCACACGAAACAGGGTCTCAGGATGCATGCGAGAAAATGCAAAGGGGATCTTTTCCAACTGTCTGTCAAAAAGGAAGACTACACAATGGATTTGGATTTGAACTATGAAGATCCTGCTAAAAGACCGAGCGTGAAGCAAATACGTGAAAACATAGTCATCGTTATCAACATGTCCACTGCCATACCTTTCAACTTCTACAAGAATAAATTCAACTGTTTTTACTGCTCAAAAGACTTTACAGATTCTGATTCTTTGAAAGAACATACCGTCGTTGAGCATCCCGTGGTTAACGTCCAGGagaaatgtattaaaaagtgTCGAGAATCCGTCGCGTGCGTCAAAATTGATGTTTCCACGCTAGCTTGCAAGGTTTGCTTTGAAAACATGCCGAGTTTGGACAGCCTTCTCGATCATTTGATTGCGAAACACGACGCCAACTATGATAAATCAATAACGACCTGCTTGCAGCCATACAGATTGGTCAAAGACAATATGGCCTGTCCAAACTGTCCCGGCGAAGTGTTTCGTTTCTTTGGCACGTTACTGAAACACATGAATAAGAAGCatacaaacaataatataatttgtgtttattGCGGGGAGACGTTTCGTCGTGATCAAAATTTACGCGTTCATATTTGTAGGCATCATCGTGATGGACGTTTCAAATGTAACATTTGTGGCGCCGAGTGTAACATACCATCTCGGCTGTACATGCACATGGCTAAATTCCATGGTGTAAAAGCAGCGAAATGCCCGAAGTGTCCCGAAGCATTTGCAACACAATACTTGCGTCAGAAACATTTGATAGACTCTCACGATTCCGGTCACAAATGTTCGTATTGCGGAAAACTGTTCACGAGAAATTCTTTCATGCGCGATCATATTAGAAGAACGCATCTAAAAGAGAAGAATGTGGAATGCTCCGTTTGTAATATGAAGTTCTTCAACAATGTTTTGTTGCGAAGACATATGGTCAAGCATAGCGGGGAGAAGAATTTCCATTGTGAAGTGTGCGGAGAAAGATTCTTCTGGAGGAAGAGTTTACGAACGCATATGTCTAGGCACACCAAACATTTGGATTCTGTTCATTTGTAG
Protein Sequence: MASTSEPKPKRGRPRKDDIKPEPKAKRQKLSKGVKTRKYKGTESLSTRRRRNLQILFNNTSIIPFKWRGKYLCFYCSKDVSEYVALRKHTKLHGDCSILDHSLKALKGGTNMEIKIDVSNLACILCGEQYPSLVEIITHLETKHKLEYDKNVDMAIEEYRLVDLNCLICEETFSYFGYLVSHVNTNHPKNCLICDKCNQKFNKKRDLFSHMKNYHREGGYPCEICRQTFNSLNILRKHKINRHLTRCHICQLRLPSAALRQKHIDLEHPDDGSLQCDACDKEFHTKQGLRMHARKCKGDLFQLSVKKEDYTMDLDLNYEDPAKRPSVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFTDSDSLKEHTVVEHPVVNVQEKCIKKCRESVACVKIDVSTLACKVCFENMPSLDSLLDHLIAKHDANYDKSITTCLQPYRLVKDNMACPNCPGEVFRFFGTLLKHMNKKHTNNNIICVYCGETFRRDQNLRVHICRHHRDGRFKCNICGAECNIPSRLYMHMAKFHGVKAAKCPKCPEAFATQYLRQKHLIDSHDSGHKCSYCGKLFTRNSFMRDHIRRTHLKEKNVECSVCNMKFFNNVLLRRHMVKHSGEKNFHCEVCGERFFWRKSLRTHMSRHTKHLDSVHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00143277;
90% Identity: iTF_00044739;
80% Identity: -