Basic Information

Insect: Biston stratarius
Gene Symbol: -
Assembly: GCA_950106695.1
Location: OX467120.1:2441688-2443412[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.02 1.4 10.0 0.1 1 23 82 105 82 105 0.94

2 16 2 1.4e+02 3.7 0.5 3 23 133 153 131 153 0.92

3 16 0.014 0.99 10.5 2.1 2 23 175 196 174 196 0.94

4 16 0.012 0.87 10.6 0.0 1 20 200 219 200 220 0.95

5 16 0.00053 0.039 14.9 0.2 2 23 230 252 229 252 0.92

6 16 0.0033 0.24 12.4 4.5 1 23 260 283 260 283 0.91

7 16 0.00016 0.012 16.5 0.6 1 23 289 312 289 312 0.98

8 16 0.0018 0.13 13.3 2.6 2 23 320 341 319 341 0.97

9 16 0.0067 0.49 11.4 2.9 1 23 347 369 347 369 0.98

10 16 0.00088 0.064 14.2 3.1 2 23 376 398 375 398 0.96

11 16 0.013 0.91 10.6 1.2 2 23 405 426 404 426 0.93

12 16 0.18 13 7.0 0.2 1 23 432 454 432 454 0.97

13 16 0.0023 0.17 12.9 0.6 1 23 464 487 464 487 0.95

14 16 1.8e-05 0.0013 19.5 1.9 1 23 493 515 493 515 0.96

15 16 9.6e-05 0.007 17.2 2.2 1 23 521 543 521 543 0.97

16 16 7.4e-05 0.0054 17.6 1.3 2 23 550 572 549 572 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.02	1.4	10.0	0.1	1	23	82	105	82	105	0.94
2	16	2	1.4e+02	3.7	0.5	3	23	133	153	131	153	0.92
3	16	0.014	0.99	10.5	2.1	2	23	175	196	174	196	0.94
4	16	0.012	0.87	10.6	0.0	1	20	200	219	200	220	0.95
5	16	0.00053	0.039	14.9	0.2	2	23	230	252	229	252	0.92
6	16	0.0033	0.24	12.4	4.5	1	23	260	283	260	283	0.91
7	16	0.00016	0.012	16.5	0.6	1	23	289	312	289	312	0.98
8	16	0.0018	0.13	13.3	2.6	2	23	320	341	319	341	0.97
9	16	0.0067	0.49	11.4	2.9	1	23	347	369	347	369	0.98
10	16	0.00088	0.064	14.2	3.1	2	23	376	398	375	398	0.96
11	16	0.013	0.91	10.6	1.2	2	23	405	426	404	426	0.93
12	16	0.18	13	7.0	0.2	1	23	432	454	432	454	0.97
13	16	0.0023	0.17	12.9	0.6	1	23	464	487	464	487	0.95
14	16	1.8e-05	0.0013	19.5	1.9	1	23	493	515	493	515	0.96
15	16	9.6e-05	0.007	17.2	2.2	1	23	521	543	521	543	0.97
16	16	7.4e-05	0.0054	17.6	1.3	2	23	550	572	549	572	0.96

Sequence Information

Coding Sequence: ATGGTCGCTGAAAACTGCAAAAAGATACACGATGTTGTCATAAAGAAAATAGGAAATAAATATACACCTAAATCTGAACCAGATGTGGTAGACTTGTTGAAGAAGCATaagatttattgtaaaaaaccaACGGAACCGGTAGTAGATCAAGAAACAGAGTTAAAGAAACATCGGCATAATATCAGAACGATTATGAAGAATTCGAACGCAACTCCGTTCCGAGCCTTCCACGTAGATGATGGCTTTGCCTGCTCTTTCTGTGAAAACGTCTTCAAAATCGCCGCTGAATTAAAAACCCATACCAACGAAATACACGTCGATGATAAAgacaaatttaaagaaaattctACTTCCGTCTTCAGGTATGTGGTAAAACTAGACGTCACAGggttaaattgtaaaatttgttgcattaatataaaaactatagaAGATTTGGTAGTACATTTACAAACACATGAGATAAAActatatgatataaaaaatcaaatagtgtgttttaaatttgattcgGATGCTCTATGCTGTATGTATTGTGGGAACGAGTTTAGTAATTTCAAATTCTTATTGGACCACATGAACGAGCATTATAAGAACTATGTTTGTGAAGATTGCAACGCCGGTTTTATAAACTATAGAATGTTATTAGCGCACACGGACGGAGAAGATGTCACTGTCGGTGAAGTCAAATGCCCGATATGTGATGAAGTGTTCGAAAAGTACTCCAAATACAAACAACATGAATTACTAGCTCATACAGGTTTTAATCTCACCTCACACAAATGCACACACTGCAAAGAAAATTTCAACTCGGATGACAGTTTAAGAAAACACGTGGATGAAAAACACGACGGAAATCATGAATACAAATGTGACAATTGCAAGAAGACGTACGACTCCAAGGTTTTACTAATCGGACATGTCAAAAGAGTTCATTTACAAGAAGATAAACATATCAAATGTGACGTTTGCGCCAGGAGTTTCTATACGAAACAGCAGCTGCAATGTCACATGTTGACACACTCTGATACGAGACAGTTCCAATGTGACATTTGTGCGCTAAAGTTTAAATGCAAAGAGACATTGGAGCGACACATATTCACGCACAACTTAAAAGGGAAAAACAAATGCCTCTTCTGCGACGAGTCCTTCATAAGACTGTCACATTTGGATCACCACGTACGCCAGGATCATCTGAATGATAATAGAACAAGATGTTATGTTTGCGATAAGAGTCTTTATCAATCGCAGATGAAGAAACACATGGCGTTGCGTCATTCGGATATGCGGACGTTTACTTGTTCAGTTTGCGCGTTAGAGTGCGAGTCGAAACTTGCTTTGGTGATACATATGGGTTCGCATTCGAACTTGAAGCCTGAACACAAGAGACATGAATGTCTCGCTTGCGGGAAGATGTTCGATAAAGCAATGTATGTAACCAGACACATTCAAAGAGTCCACTTACTAGAGAGGAGATTTGTCTGCGATCACTGCGGGAAACAGTTCGCTGACTGCACCGCATTGAAGAACCACCTAGCGTTACACGGAACAGGGCCATCGTTTCCATGTTTTGGTTGTACAAGGGTGTTTAAAACGAAGAAAAGTATGAAAAATCACGCTCGAAATCATTTGGAAGACAAGAAAGTGAAATGCGAGATATGTCATCACGCTTTCATATACCCATATTTATTGAGAGACCATATGAAACAAGTGCATAGACTCTGA
Protein Sequence: MVAENCKKIHDVVIKKIGNKYTPKSEPDVVDLLKKHKIYCKKPTEPVVDQETELKKHRHNIRTIMKNSNATPFRAFHVDDGFACSFCENVFKIAAELKTHTNEIHVDDKDKFKENSTSVFRYVVKLDVTGLNCKICCINIKTIEDLVVHLQTHEIKLYDIKNQIVCFKFDSDALCCMYCGNEFSNFKFLLDHMNEHYKNYVCEDCNAGFINYRMLLAHTDGEDVTVGEVKCPICDEVFEKYSKYKQHELLAHTGFNLTSHKCTHCKENFNSDDSLRKHVDEKHDGNHEYKCDNCKKTYDSKVLLIGHVKRVHLQEDKHIKCDVCARSFYTKQQLQCHMLTHSDTRQFQCDICALKFKCKETLERHIFTHNLKGKNKCLFCDESFIRLSHLDHHVRQDHLNDNRTRCYVCDKSLYQSQMKKHMALRHSDMRTFTCSVCALECESKLALVIHMGSHSNLKPEHKRHECLACGKMFDKAMYVTRHIQRVHLLERRFVCDHCGKQFADCTALKNHLALHGTGPSFPCFGCTRVFKTKKSMKNHARNHLEDKKVKCEICHHAFIYPYLLRDHMKQVHRL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00206347; iTF_00666721;
90% Identity: iTF_00206347;
80% Identity: -