Basic Information

Insect: Biston stratarius
Gene Symbol: -
Assembly: GCA_950106695.1
Location: OX467121.1:6098216-6101296[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.1e-07 2.2e-05 25.1 1.1 2 23 135 157 134 157 0.95

2 14 0.003 0.22 12.5 0.5 2 23 164 186 163 186 0.95

3 14 0.0036 0.26 12.3 2.8 2 23 193 215 192 215 0.93

4 14 5.4e-07 3.9e-05 24.3 0.6 2 23 223 245 222 245 0.96

5 14 6.1e-05 0.0044 17.9 1.2 1 23 251 274 251 274 0.95

6 14 0.00033 0.024 15.6 0.4 1 23 281 304 281 304 0.97

7 14 1.5e-06 0.00011 22.9 2.7 2 23 310 332 310 332 0.96

8 14 0.00039 0.028 15.3 2.6 1 23 348 371 348 371 0.96

9 14 0.005 0.36 11.8 0.5 5 23 384 403 381 403 0.92

10 14 5e-05 0.0036 18.1 0.6 2 23 409 431 409 431 0.97

11 14 0.27 19 6.4 5.2 2 23 439 461 438 461 0.91

12 14 1.1e-06 7.7e-05 23.4 1.6 1 23 466 488 466 488 0.98

13 14 0.013 0.94 10.5 1.2 1 23 494 517 494 517 0.96

14 14 4.7 3.4e+02 2.5 0.1 2 20 631 648 630 650 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.1e-07	2.2e-05	25.1	1.1	2	23	135	157	134	157	0.95
2	14	0.003	0.22	12.5	0.5	2	23	164	186	163	186	0.95
3	14	0.0036	0.26	12.3	2.8	2	23	193	215	192	215	0.93
4	14	5.4e-07	3.9e-05	24.3	0.6	2	23	223	245	222	245	0.96
5	14	6.1e-05	0.0044	17.9	1.2	1	23	251	274	251	274	0.95
6	14	0.00033	0.024	15.6	0.4	1	23	281	304	281	304	0.97
7	14	1.5e-06	0.00011	22.9	2.7	2	23	310	332	310	332	0.96
8	14	0.00039	0.028	15.3	2.6	1	23	348	371	348	371	0.96
9	14	0.005	0.36	11.8	0.5	5	23	384	403	381	403	0.92
10	14	5e-05	0.0036	18.1	0.6	2	23	409	431	409	431	0.97
11	14	0.27	19	6.4	5.2	2	23	439	461	438	461	0.91
12	14	1.1e-06	7.7e-05	23.4	1.6	1	23	466	488	466	488	0.98
13	14	0.013	0.94	10.5	1.2	1	23	494	517	494	517	0.96
14	14	4.7	3.4e+02	2.5	0.1	2	20	631	648	630	650	0.85

Sequence Information

Coding Sequence: ATGGAAGCTGTGTATATAAAAAGTGAAAATATAGATATTGAAATTAAGGAGGAACCTGTAGACAGTGAATATGGTGAAAATGATAAAAGAACACCAACAATCTCTTGCAAGAAAGAATTTAACACAGAAGATAAACCGAATCAATTGTGTACGCAAAACTCTAGTATTTCAATCAGCGAATCGTGTCATACACAAATATTACAACAAAATGCAAATTCACAGCAAAACGAAACACTAAcacatttaaaagaaaatgaaaatatacaagAATACTTACAACAAAATGAAAACACAGAAACGAATACAGAACTATTGCAGCAAGAACTAACAAATGGAGTAGCGAGACCATCACATATAGACATTCAAGGAAAAGTATATGAGAATGGAAAAATTAATAGATTGAACTGTTCTCAGTGCGGGAAGTCATTTAAGAATAGAGCTAATttgaaaaatcatataaaatatgtacactCTGATGACCAAACCATTGAATGTACAGAATGTATGAGAAGTTTTAAGTCCCTGCTGTATTTGCGTTCGCATATGAGCTCGGTGCACGCTAAGACCGAGTTAGTGCAATGCGAACACTGTCAAAAAGTATTTCTGAACAAGAAAAAACTGAACAACCATATTTATTATACGCACAGACAGCCAGAGGAACAAGTGACCTGTAAAATATGTTCCAAGACTTTTAAAGGGCCGTATAATTTGAAAATTCATATGAGGTACGTACATCCTCAAGGAGACCCACACCCATGTCCGTTCTGCTATAAAACATTCAAAGTTGAAATGCTTCTACAAAGGCACATGAAATGGGCCCACCCAGACGACGGCATGACCTACAAATGCCAGGAATGCAACAAAATCCTACCGTCCCTCGACGGGTACAAAACCCATATGAAGAATGTACACCTATTCGACAGAGCTACATGTGACATATGCAAGCGAACATTCAAAACTAAGAAATCTTTAGAACGGCATATGAAGAACATTCACAATGGAAATAAAACCACAGAAGTTACAACATACGTCCCTAAGGAACACACATGTCAGTACTGTGAACGTGCCTTCAATAATACAACGTCTCTATTCTGGCATATAGAAAGGTTTCATGCACAATTACAGAAACTACCGAATAACTTGTGCATTATttgcaataaagagttttcaGATTACGCAGCGTTGCATAGACATCTGACTTCAGTGCATTCGCTGGAAACGGCCACCTGTAAGATTTGCATGAAAGAGTTCAAATCACCGATCAATCTTCAAAATCACATAAGAATAACACACGCACCTCCGGAAGCGGTGCAAAAATGTGACACATGTCATAAGACATTTAAGTGTCCGTTACATTTGAGAATGCATGTCCTAGCTGTGCACGACGGGGGTCAATACCCGTGTGACATCTGTCAAAAAACCTTCACTTCGATGAAATATTTgaacaaacatataaaatcTCATAACAAAGCTAGAGATTTTCAATGTGATGTCTGTctgaaaatgtacaaaaacataaattctgtgaacaaacacaaaaagcAAGTTCACAATGGCGTTAAATGCAATATCTGTAACATAAAACAGGCAAATATTGAAGAGCATATGAGAAAAAGTCATCCGGACGTTGCTTTGAATCTAACTATGGACTCTGTGAAAAGTAAGAATCAGGATATGGACTCTATGCAATTTCCGAACGAGACTATGCCCTCTGTGAATCAAATTAATCATATGGACACAGAGAAATCTTCAAATGTTACTATGGTAACAGTGAAATGTGAGAATGAATCTATGGACACGATGAAATGGGAGAATGAAACTATGGATGCAGTGAAATATGGGAATGAAAGTATGGCCGCAGTaaaaactgaaattaaaatagACGAAATAACATGTAGAGTATGCAATAAGATAATAGATAGTTCAGAATACAACGAACACGCCAAGAATTGCGAACGCCCGCCTATTGTTGAAGTGACTATTAAAATGGAAGTAGAAGAAACATAA
Protein Sequence: MEAVYIKSENIDIEIKEEPVDSEYGENDKRTPTISCKKEFNTEDKPNQLCTQNSSISISESCHTQILQQNANSQQNETLTHLKENENIQEYLQQNENTETNTELLQQELTNGVARPSHIDIQGKVYENGKINRLNCSQCGKSFKNRANLKNHIKYVHSDDQTIECTECMRSFKSLLYLRSHMSSVHAKTELVQCEHCQKVFLNKKKLNNHIYYTHRQPEEQVTCKICSKTFKGPYNLKIHMRYVHPQGDPHPCPFCYKTFKVEMLLQRHMKWAHPDDGMTYKCQECNKILPSLDGYKTHMKNVHLFDRATCDICKRTFKTKKSLERHMKNIHNGNKTTEVTTYVPKEHTCQYCERAFNNTTSLFWHIERFHAQLQKLPNNLCIICNKEFSDYAALHRHLTSVHSLETATCKICMKEFKSPINLQNHIRITHAPPEAVQKCDTCHKTFKCPLHLRMHVLAVHDGGQYPCDICQKTFTSMKYLNKHIKSHNKARDFQCDVCLKMYKNINSVNKHKKQVHNGVKCNICNIKQANIEEHMRKSHPDVALNLTMDSVKSKNQDMDSMQFPNETMPSVNQINHMDTEKSSNVTMVTVKCENESMDTMKWENETMDAVKYGNESMAAVKTEIKIDEITCRVCNKIIDSSEYNEHAKNCERPPIVEVTIKMEVEET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00206315;
90% Identity: -
80% Identity: -