Bbet003968.1
Basic Information
- Insect
- Biston betularia
- Gene Symbol
- -
- Assembly
- GCA_905404145.1
- Location
- FR989866.1:4883594-4893615[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.015 1.2 10.4 0.9 3 23 651 672 650 672 0.90 2 24 2.5 2e+02 3.3 1.5 4 23 1031 1052 1029 1052 0.84 3 24 0.039 3.1 9.0 0.3 1 21 1057 1077 1057 1078 0.96 4 24 6.6 5.3e+02 2.0 0.2 1 23 1119 1142 1119 1142 0.89 5 24 0.00028 0.022 15.8 1.6 3 22 1153 1172 1153 1172 0.96 6 24 0.27 21 6.4 0.2 3 23 1181 1202 1179 1202 0.95 7 24 0.2 16 6.8 0.6 3 23 1223 1244 1221 1244 0.95 8 24 0.0015 0.12 13.5 1.4 1 23 1250 1273 1250 1273 0.95 9 24 0.13 11 7.4 0.0 1 23 1299 1322 1299 1322 0.90 10 24 0.0058 0.46 11.6 3.5 1 23 1327 1349 1327 1349 0.97 11 24 0.008 0.64 11.2 0.2 1 23 1355 1378 1355 1378 0.95 12 24 0.0014 0.11 13.6 1.4 1 23 1386 1408 1386 1408 0.98 13 24 0.00019 0.015 16.3 1.8 1 23 1457 1480 1457 1480 0.97 14 24 0.0027 0.22 12.7 1.5 1 23 1537 1560 1537 1560 0.96 15 24 0.0012 0.093 13.8 2.1 2 23 1587 1609 1586 1609 0.95 16 24 0.3 24 6.2 0.1 3 23 1616 1637 1615 1637 0.94 17 24 0.01 0.83 10.8 0.2 1 21 1681 1701 1681 1702 0.95 18 24 0.0013 0.1 13.7 0.6 1 23 1712 1734 1712 1734 0.93 19 24 0.00012 0.0094 17.0 0.3 2 23 1828 1850 1828 1850 0.93 20 24 8e-07 6.4e-05 23.8 1.3 3 23 1857 1877 1856 1877 0.98 21 24 0.16 13 7.1 2.3 1 23 1894 1916 1894 1917 0.94 22 24 0.22 18 6.7 0.0 1 23 1938 1960 1938 1960 0.98 23 24 0.029 2.3 9.4 0.6 1 23 1966 1989 1966 1989 0.95 24 24 0.00027 0.021 15.8 0.4 1 23 1997 2020 1997 2020 0.96
Sequence Information
- Coding Sequence
- ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTTGGATGACACGGAACCACCCGCCCTCGTCACGAAAATCAAGGATTGCGTGTCGGTCCAGATAAACGAAAATGACGAACTGCCGACAAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCATATATTTAAGACTGTTTGTGAAAAGACGCAAAACAAGTTACAGTCTCTGATTAAAAAGGATGGCAGCCTACTAGAAGAGGTGAAAATAAAGAGTGAGCCATTTTATGATGAGGCATATGATGATGGAGTGGTCATTGATGGTTCCTATCCAGTCATTGAGAATGTGGCCTCAACAAGCAAGCTCCAGCCTGAAGGTCCACCAATTCTGGCCTCGTTGGGGCTCACACCAAGGAGTGATAAGAGTGTGGATCCACGAATGGACTGGCATCGAGTCCATGCCATACTGGACATAGTTCAAGAGACTGATATCATAGACTCACTCCAGTCTACCGAAGAGACTGATATACTCCACCATTCCGATCACGACTCAGAATCTGAAGGAGAACTCCAACCGGACTTGGATGATGTGTTCATTCACTGTGATAAAGGTTATAGATGCAGAGACAAAAGCATCATATCCAAAAACCCTCTTAAGTCAGAAGCAAACAGTATAAAAGAGGCCAATAAGCTGAGAAAACGTAAAGCTGTCGCCGTGAAGCATTGTCCTCGCCCTAAAAACGCGTGGCAACTACTTTTCACAGACGATCTGCTTGAGCTCATTGTCACGTCAACAAATGAGAATATCGTGAGACACGGTAAAACTCACTCGATTAACACAACTACAGACGAAATAAGAACTCTGATCGGCATTATCTATCTGCACGGAATCATGAGACCAACCTGTCAGGACTACAGCGATTTGTGGGATGGTTACTGTGGCATGTCGTGTGTTAAAAAAGCTATGACTTTGGAACGCTTTAGATTTCTACTACAAAACTTGAGCTTTGATACCCAAAATGATGATGCTTTAATACTTTTTGATATCATGAAACGTATGCGAAAAGCATTTGAAATTTTCGCCATGAATTGTAGGACAGCCTTCGAGATAGAAACCGTCGCGGTTGTAGACGAGATCATTGTGCCAGTTTATGGGCCTTGTCCGTTTCGATACGATATTGATAAGAAGGCGCTCAAACGTGGCATTAAAATGGTGCTACTGATCGACCCGACTAATTTCTACATAAGCAATTTAGATGTGATTACCGATCCTTATTTTGGGGCTGATGAGATTGTGAAGAAAATAACTCAACATCTGTTCGATTCTGGAAAAACTATCGTAATGGACAGTTGGTATTTTTCAGAACCTTTGATGAATGTTCTCAAGACCTATAATCTCTACATAGTAGCTGCATTGAATCCTCAAAACGAAAAGATTCCGCCGCTGTTTCTATCCCAGTACAGAAAAACCTGTACGTTCATGTCTGGGTTTTTAGATGAAGAAGTCTCGCTGACTTCATATGTCGATTCCAAATCAAAGTCAATAAACATCATAACAAACGAGCCAAAGTTTTACCGAAGAGGCCCCAACATCAATCACATAACAGCAGTATCGGTGTATAAGAAAAATCAATCTGCAGTGGAAGTAGTCGATGTTCTAATGCATTATTACACAACTATGCAACACACAAATGACTGGACTCTGTCCTTGTTCTTTACTTTGCTTAATATTGCCTCGGTCAATGCTCAGGGGGTGGAGAGCGAGAATTACGAAGAGGATGACTATGAGGAAGAGATAAATGAGTCTGAAGTACCACAACCAGTAAAGGTGCCGAACATGCCAGAAGTATCCATCACAGTAATGCGCAATACTGGAGAAACACTCCATGCAAGACAAGGAATACAACAACTCGCTTCCAAGGACTGTCTTATTTGCGGGCGCACTTACAGGTACTCTCACAATGCTCGGAGACACGAACTAGCGTCGCACAGCTTTGACCGTTACACAAATAAAGTAACAAATAAAAAATCGCATCATTCGCGTATGATGCCCAAACTTCGACCGAACCCCTTCAATCCAAAATCACGTCTGATGCCCAACCCAATCAGCCACAAACTGCAATTCATGCCCAAAAATATTCCCGCCAAAATAATACCACAAAAAATAAACCTCCCACCGAAACCGATACCAATCAAAACATCTAAGACAGCGCAAAATAATCTACCATATCCTTTACGCATAAAAGCGCTCAAAGACTTACAGATAAAGAAAAAAGAACCGCAGATTTTGAAAACTTTGCTCACCGCGAAACCTGAGGTTTTAGTGTCAGAACCGGAAATAATGAATTCTGGCCCGGAAAGTCCAGAAACGCTGATATCCGAGCCAGAAATCGCCTCTTTTCAAGTAGAAGCTATTCTGTCAGAGCCTAATGAATATGATCCGAATCAAGAAGAGGACGGTGAAATGGACCATGATAATCAGACTCAAAATTATGATACTGTTGATATGGAGTCCGATCATGAGATTGAAATCGCTCGCCAGCAAGAAAATGGGGCTGAGGAATCTGAAAAAAATGAATTTATTGAAAATAGCGACGAGAACATGCATCAAGAGGAGGATCAAGATTTACATATCGACGAGAATGAAAAACATGAAGAGAGTGAAGGAGATCAAGATACTGGTGATAGCCAGGGAAATATGGAGATAGATGAAAGCTGTAATCACGCGGACATTAATGACTTGGCTAAGGGAGACAGAAATGAAAACGATGAAGGCGAACATGAAGAAGTCGAGCCTGATGAAGTAAATCCCGACGCTGATGAAAATGATGGTGATGATGATATGCCGCCGCCCCCAGTAGTAGAATTAAATGAGGAAATACAGCATTCGTCTAGCGAAATGAACGAGGACGACGAAGAACTCGACGAAACGGCTGATCTTAACGAGACCGGGGAACACAAACCGCAAGACCTTGACCCAGACAAGACATATGTCACCAAAGTTCAAAAAGATTTCATCGATAAGTATCGTGATATCATCCAACAGATTAATACGAAACGTTGCCTTTGCTGCGATAAGACATACCCACGTAGGAAGGCAGTCGTTCAACATTTGCAGAAAAATGGACACAAAGTCCCCAAACATACGTGCTACAACTGCGTAATAACGTTTACACATATTGGAGCGCTGCTAAGCCACATGAGAGCGAACGCTTGTACGGATCTTTGGAAAATCGTATTTGATAAAAACGGTATTCCAGATGATATGGTCATCAAATACGAGCCTCAGGTGAAGATTCAACCTAAGGACATTTTCAACGCTCGTTCGTACGCGTGTAGGCTTTGTCCGGCCAAGTTCCAACTGAAACAATCCATTATGAAGCATGTGCTGGATGTGCATGAAGATGGTCAGTCGAATATCCCGCTCGGGTGTGTTCACTGCCGTACGAGCTTCAAAGACAAATCTTTGCTCAAGAAACATATTCGCGTCGGCGAATGCACGGTTTACATCAACTGTGATTTATGTTCGGAACAATTTTCGAACATGCAAGACTTCAGCGATCACGCCTTGACTATCCACGCGGACCATTTCGAAAAGTCCGACAATCAGAACAAATGTATCGACGGTCGCGCCACTGATTGTTCCCTCTGTGGAAAGAAGAACAGCAACTATCTCAATCTTGTGAAACATTTAAAATTAGTTCACAACGAAGATAAACCTCATTACTGTCAAAATTGTGATGCTAAATTCGAGCATGCTGCTGACTTGAATAAACACATTTATGTTGAACATTCTGACCAAGCGTTAGGGTTAACGCCTCAGGAACCGGACATGTCTCTTGTGAAAGAGGAAGCCGAAGAATACCATTATTCATGCACAGAATGTAACGCGATATTCGAAACTGTCGACGCTTGGACGGACCACCAAGTGGCCGAACACAATCAAGTCGCCCATCACTGTGACCAATGCGACAAAAAGTTTTTGCGACCGTCGGAATTGGCGGAACATAAGAATACCCACTTGCGAGTCAAGTTCTACTCCTGTAGCGTATGCCCAAATTCGTACAGTACTCCTCAAAAGTTGTCTGACCATGTCCAACAAGCTCACCCGATAGGGGGCGACACTGAATTCTATTGCGACGTTTGTATTCGATCTTTCAAAAGTCGTCAGGCCTTCTCGAACCACATGCGTATCCATGCTAAAGTACCAACTACTAACAGAAAGCCTGGTGAACAAAAAGGTTTCGATCCGCGAATTATCGGTAAACCAGTGAAACAATTTACAATGGTCCAACCCGGTTTCGTCAACTTCAAGCCAAATGCTAACGTCCCTAATGCACCTTACTCGTGTGACATATGCGGTAAGGGCTTCATGCATAAGAAAAATATATGGAAACACAAAAAAGTGTTGCACGCCGACATTATTAACGATAGAAACGATAGTGAGGAGAATACCATGCATGCTTCCACGGAAGATGACGATTATAATCCTGAAGAAAACGGAGCTCTTTCCACCCCTCAATTCAATAGTTTTAACTTTACCAATTTCAATAACAGTACACCACAGCAAGATGCCATGCCGTTTTCTTGCGACTTATGTTCTAAGCGTTTCCCGCTTAGGACCAGTCTGTGGAAGCACAAACGTGCTAAGCACGGCGTCGTAAATCCCGGCGCTGGCGCTGGAAATGATACACCCGCACCAACGAAAACGTCTGGGGAATCCAGTCGATCTAGCTGCACCATTTGCAAAATAACATTTTCAGACAAGAAATCTTACTATCGCCACAGGAAGAACGTTCACAAAACGGCTACGGAAATGTGCAAACTTTGCGGTAAACCGCTGAACTCAACATTAGAACTATATGAGCATCTGAAAGCCGCACATGCGCGGGAGTTGCTCGGATATAACGCTAATCAAGGGTCAAGTAAAACACAAGAAGTGGCTCAAGATCAAGATGTTGATTATGATAACGAACAGGAATCTGCAGATCCCAGCATGGACTATCAGGCTCGGTACCCATGCGATACATGCGGAAAACAGTTTGTCGGGCTGCTGGCGTTGCAAAACCATCAGTGCATAAATCAACTCCCACAGCAACCGCAGACGTTCGACTGTGAAATTTGTCACAAGAGCTACACGTCTATCGCCGCGTTGAAGAGTCATCGCGGTTGGCATTTACGTTCACCGGATGGTAAAGCGGCTGCCAATAACAGCGGGCTTTGGATGCCGCAGCACAAAGTGACGAGTAAGGTCAGCAAACACGAGGTCGTAGACGCGGTGCAGCTGGCGCGCGTTTCACATTCGACTTCTTCACATTCAGCACCAGCTGCCGCCGTCACGGCTAAAAGGCGACTACCACCAGAAGTGGAAGTTACAGTTGTAAATCCCAACAAAAAGTTACGCTCAGACGACTCTGTCGAATTGGACCATCAGAATGAAGCGGCGGACGGGCGATATTGTACCATCTGCGACAAAGAGTTCACGAAACGCGCCGCCTACCAGCGCCATATGGACGAAGTCCATCAACCGAATTCCGTTTTTTGTCCGGTTTGCGATAGAAGTTTTACAAGGAAGTCTACGCTTCTGGTACATATGAAAAAGCATTATGAGACTGGTGAGGGCACGTCTACAACGCAGATTGAGGATGAAGGTCATAGCTGTGACGTTTGCGGCGCTGTGTTTGAGTGCGAGAAGGGATTGAAGGCTCATCAGGCGAGGCATCACGCGGAGGACTCGGGAGAATCGGAGGACGATGGTAACGCCCCAGCAGCATTACCGGGAGAGTTCACTTGTGGCCAATGCGGCGACGGAGTTGCCAGCCCGCGTGATTTGCTAGCCCATCGTTCAATGCACGCCACTCCAACCAAGTTCTTCTGTAACATTTGCAAGGTTTATTTTGCGCGTGCTTTGGATCTCTCCTCTCACACTCGCGCGAGACACGCGGACAATGACAAAGTCTTTTTCCCCTGTGCCATGTGCGACCGCTTCTATATGAACAAGAAGAGTTTACAGCGGCACATCGAGATGGCGCATTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRGELLPIFPTTSLDDTEPPALVTKIKDCVSVQINENDELPTNVCRKCMDNVNNWHIFKTVCEKTQNKLQSLIKKDGSLLEEVKIKSEPFYDEAYDDGVVIDGSYPVIENVASTSKLQPEGPPILASLGLTPRSDKSVDPRMDWHRVHAILDIVQETDIIDSLQSTEETDILHHSDHDSESEGELQPDLDDVFIHCDKGYRCRDKSIISKNPLKSEANSIKEANKLRKRKAVAVKHCPRPKNAWQLLFTDDLLELIVTSTNENIVRHGKTHSINTTTDEIRTLIGIIYLHGIMRPTCQDYSDLWDGYCGMSCVKKAMTLERFRFLLQNLSFDTQNDDALILFDIMKRMRKAFEIFAMNCRTAFEIETVAVVDEIIVPVYGPCPFRYDIDKKALKRGIKMVLLIDPTNFYISNLDVITDPYFGADEIVKKITQHLFDSGKTIVMDSWYFSEPLMNVLKTYNLYIVAALNPQNEKIPPLFLSQYRKTCTFMSGFLDEEVSLTSYVDSKSKSINIITNEPKFYRRGPNINHITAVSVYKKNQSAVEVVDVLMHYYTTMQHTNDWTLSLFFTLLNIASVNAQGVESENYEEDDYEEEINESEVPQPVKVPNMPEVSITVMRNTGETLHARQGIQQLASKDCLICGRTYRYSHNARRHELASHSFDRYTNKVTNKKSHHSRMMPKLRPNPFNPKSRLMPNPISHKLQFMPKNIPAKIIPQKINLPPKPIPIKTSKTAQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPNEYDPNQEEDGEMDHDNQTQNYDTVDMESDHEIEIARQQENGAEESEKNEFIENSDENMHQEEDQDLHIDENEKHEESEGDQDTGDSQGNMEIDESCNHADINDLAKGDRNENDEGEHEEVEPDEVNPDADENDGDDDMPPPPVVELNEEIQHSSSEMNEDDEELDETADLNETGEHKPQDLDPDKTYVTKVQKDFIDKYRDIIQQINTKRCLCCDKTYPRRKAVVQHLQKNGHKVPKHTCYNCVITFTHIGALLSHMRANACTDLWKIVFDKNGIPDDMVIKYEPQVKIQPKDIFNARSYACRLCPAKFQLKQSIMKHVLDVHEDGQSNIPLGCVHCRTSFKDKSLLKKHIRVGECTVYINCDLCSEQFSNMQDFSDHALTIHADHFEKSDNQNKCIDGRATDCSLCGKKNSNYLNLVKHLKLVHNEDKPHYCQNCDAKFEHAADLNKHIYVEHSDQALGLTPQEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYSCSVCPNSYSTPQKLSDHVQQAHPIGGDTEFYCDVCIRSFKSRQAFSNHMRIHAKVPTTNRKPGEQKGFDPRIIGKPVKQFTMVQPGFVNFKPNANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEDDDYNPEENGALSTPQFNSFNFTNFNNSTPQQDAMPFSCDLCSKRFPLRTSLWKHKRAKHGVVNPGAGAGNDTPAPTKTSGESSRSSCTICKITFSDKKSYYRHRKNVHKTATEMCKLCGKPLNSTLELYEHLKAAHARELLGYNANQGSSKTQEVAQDQDVDYDNEQESADPSMDYQARYPCDTCGKQFVGLLALQNHQCINQLPQQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDAVQLARVSHSTSSHSAPAAAVTAKRRLPPEVEVTVVNPNKKLRSDDSVELDHQNEAADGRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDRSFTRKSTLLVHMKKHYETGEGTSTTQIEDEGHSCDVCGAVFECEKGLKAHQARHHAEDSGESEDDGNAPAALPGEFTCGQCGDGVASPRDLLAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00044704;
- 80% Identity
- -