Basic Information

Insect: Alcis repandata
Gene Symbol: -
Assembly: GCA_949125135.1
Location: OX421226.1:10343387-10353468[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.011 0.91 10.8 0.6 3 23 655 676 654 676 0.90

2 24 2.7 2.1e+02 3.3 1.5 4 23 1034 1055 1032 1055 0.84

3 24 0.041 3.2 9.0 0.3 1 21 1060 1080 1060 1081 0.96

4 24 6.9 5.5e+02 2.0 0.2 1 23 1122 1145 1122 1145 0.89

5 24 0.00029 0.023 15.8 1.6 3 22 1156 1175 1156 1175 0.96

6 24 1.4 1.1e+02 4.2 0.1 3 23 1184 1205 1182 1205 0.94

7 24 0.029 2.3 9.5 0.5 3 23 1226 1247 1224 1247 0.96

8 24 0.0031 0.25 12.5 1.3 1 23 1253 1276 1253 1276 0.92

9 24 0.14 11 7.4 0.0 1 23 1302 1325 1302 1325 0.90

10 24 0.0061 0.48 11.6 3.5 1 23 1330 1352 1330 1352 0.97

11 24 0.0072 0.57 11.4 0.2 1 23 1358 1381 1358 1381 0.95

12 24 0.0033 0.26 12.5 1.5 1 23 1389 1411 1389 1411 0.97

13 24 0.0002 0.016 16.3 1.8 1 23 1460 1483 1460 1483 0.97

14 24 0.0079 0.63 11.3 1.4 1 23 1543 1566 1543 1566 0.96

15 24 0.0022 0.18 13.0 1.5 2 23 1592 1614 1591 1614 0.95

16 24 0.32 25 6.2 0.1 3 23 1621 1642 1620 1642 0.94

17 24 0.011 0.87 10.8 0.2 1 21 1686 1706 1686 1707 0.95

18 24 0.0014 0.11 13.7 0.6 1 23 1717 1739 1717 1739 0.93

19 24 0.00012 0.0098 16.9 0.3 2 23 1835 1857 1835 1857 0.93

20 24 8.4e-07 6.7e-05 23.8 1.3 3 23 1864 1884 1863 1884 0.98

21 24 0.00093 0.074 14.2 0.8 1 23 1902 1924 1902 1925 0.94

22 24 0.23 18 6.7 0.0 1 23 1946 1968 1946 1968 0.98

23 24 0.03 2.4 9.4 0.6 1 23 1974 1997 1974 1997 0.95

24 24 0.00028 0.022 15.8 0.4 1 23 2005 2028 2005 2028 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.011	0.91	10.8	0.6	3	23	655	676	654	676	0.90
2	24	2.7	2.1e+02	3.3	1.5	4	23	1034	1055	1032	1055	0.84
3	24	0.041	3.2	9.0	0.3	1	21	1060	1080	1060	1081	0.96
4	24	6.9	5.5e+02	2.0	0.2	1	23	1122	1145	1122	1145	0.89
5	24	0.00029	0.023	15.8	1.6	3	22	1156	1175	1156	1175	0.96
6	24	1.4	1.1e+02	4.2	0.1	3	23	1184	1205	1182	1205	0.94
7	24	0.029	2.3	9.5	0.5	3	23	1226	1247	1224	1247	0.96
8	24	0.0031	0.25	12.5	1.3	1	23	1253	1276	1253	1276	0.92
9	24	0.14	11	7.4	0.0	1	23	1302	1325	1302	1325	0.90
10	24	0.0061	0.48	11.6	3.5	1	23	1330	1352	1330	1352	0.97
11	24	0.0072	0.57	11.4	0.2	1	23	1358	1381	1358	1381	0.95
12	24	0.0033	0.26	12.5	1.5	1	23	1389	1411	1389	1411	0.97
13	24	0.0002	0.016	16.3	1.8	1	23	1460	1483	1460	1483	0.97
14	24	0.0079	0.63	11.3	1.4	1	23	1543	1566	1543	1566	0.96
15	24	0.0022	0.18	13.0	1.5	2	23	1592	1614	1591	1614	0.95
16	24	0.32	25	6.2	0.1	3	23	1621	1642	1620	1642	0.94
17	24	0.011	0.87	10.8	0.2	1	21	1686	1706	1686	1707	0.95
18	24	0.0014	0.11	13.7	0.6	1	23	1717	1739	1717	1739	0.93
19	24	0.00012	0.0098	16.9	0.3	2	23	1835	1857	1835	1857	0.93
20	24	8.4e-07	6.7e-05	23.8	1.3	3	23	1864	1884	1863	1884	0.98
21	24	0.00093	0.074	14.2	0.8	1	23	1902	1924	1902	1925	0.94
22	24	0.23	18	6.7	0.0	1	23	1946	1968	1946	1968	0.98
23	24	0.03	2.4	9.4	0.6	1	23	1974	1997	1974	1997	0.95
24	24	0.00028	0.022	15.8	0.4	1	23	2005	2028	2005	2028	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACACGGAACCTCCCGTCCTCGTCACGAAAATCAAGGATTGCGTGTCGGTCCAGATAAACGAAAATGACGAACTGCCGACGAATGTCTGCAGGAAATGCATGGACAATGTCAACAACTGGCATATATTCAAGACTGTTTGTGCAAAGACACAAAACAAACTACAGTCTCTGATTAAAAAGGATGGCAGCCTACTAGAAGAGGTGAAAATAAAGAGTGAACCATTTTATGATGAAGCATATGATGATGGAGTGGTCATTGATGGTTCCTACCCAGTCATTGAGAATGTGGCAACAACAAGTAAGCTGCAGCCGGAAGGCCCACCCATCCTGGCTTCTTTGGGGCTCACACCGAGGAGTGATAAGAGTGTGGATCCTCGAACGGACTGGCACCGAGTCCATGCTATACTCGACATGGTACAGGAGAACAATATCATAGACTCACTCCAGTCTACCGAAGAGACAGATATACTCCACCATTCTGATCACGACTCGGAATCAGAAGGAGAACTCCAACCGGACTTGGATGATACATACATTCATTGCGATAAAGGCTACAAATGCAGAGACAAAAGCATAATTTACAAAAACCCTCAAGCTGACACAAACAGTATAAATCAGACTAATAAAGTGAAGAAACGCAAAGCTGTCGCCGTGAAGCATTGTCCTCGCCCTAAAAACGCGTGGCAGCTACTGTTCACAGACGATCTACTCGAGCTCATTGTCGCGTCAACAAACGAGAATATCATCAGACACGGTAAAAGCCACTGTACGATCACTACTGCCGACGAAATCAAAACGTTGATAGGTATTTTGTACCTTCACGGAATTATGAGACCGACCTATCAGGACTATAGCGATCTCTGGGATGGTTATTGTGGAATTTCATGCATTAAAAAAGCAATGCCTCAGGAACGCTTCAGATTTCTCATACAACACCTAAGCTTTGATACCCAAAATGATGATGCTTTAATCTTGTTTGATATCATGAAACGTATGCGAAAAGCGTTCGAAATCTTTGCCATGAATTGTAGGACAGCCTTCGAAATAGAAACTGTCGCGGTCGTAGACGAGATTATTGTGCCAGTTTACGGGCCTTGTCCATTTCGATACGATATTGATAAGAAGGCGCTGAAACGTGGCATCAAAATGGTGCTGCTGATCGACCCGACTAACTTCTACATAAGCAACTTGGATGTGATAACAGATCCTTATTTTGGAGCCGATGAGATCGTGAAGAAAATAACTCAGCATCTATTCGAATCTGGAAGAACCATTGTGATGGATAGCTGGTACTTCTCGAAACCATTAATGAATGTTCTTAAAAACTACAATCTGTATACAGTAGCAGCCTTAAACCCTAAAAATGAGAAAATACCTCCACTGTTTCTGTCTCAATATCGGAAAACTCGTACGTTCATGTCTGGGTTTCTAAAAGACGAAATTTCTCTAACTTCTTATGTAGATTCCCAGTCCAAGTCAATAAACGTCATGACAAATGAGCCAAAGTTCTATAGAAGAGGCCCCAACATCAAACACGTAACAGCAGTATCGGTGTACAAGAAAAACCAATCCGCAGTTGAAGTAGTTGATGTTCTTATGCATTATTACACAACAATGCAGCACACAAATGACTGGACGCTGTCTTTATTCTTCACTTTGCTGAACATTGCCTCGGTCAATGCCCAGGGAGTGGAAAGCGAGAACAACGAAGAGGACGATTATGAAGAAGAGCCTGACCCTGACCCTGAGCCGGAGCCGGAGCCACCCCAACCGGTGAAAGTCCCCAACATGCCCGAAGTGTCCATCACAGTTATGCGCAACACGGGGGAAACGCTCCACGCCAGGCAAGGCATACAACAACTCGCTTCCAAGGACTGTCTCATCTGTGGACGCTCTTATAGGTACTCCCACAATGCTCGCAGACACGAACTAGCGTCCCACAGCTTCGATCGCTACACAAACAAAGTGACACACAAGAAGTCGCATCATTCACGCATGATGCCTAAACTCAGGCCGAATCCTTTCAACCCGAAATCTCGTCTCATGCCTAACCCGATCAGCCACAAACTACAATTCATGTCCAAAAATATTCCCGCCAAAATAATACCGCAAAAAGTCAACCCCCCACCGAAACCGATACCCATTAAACAACTTAAGGCATCGCATAATAATCTACCGTATCCTCTACGCATAAAAGCGCTCAAAGACTTacagataaagaaaaaagaacCGCAAATCTTGAAGACGTTGCTCACCGCAAAACCGGAGGTTTTAGTTTCGGAGCCGGAAATAATGAATTCCGGACCGGAAAGTCCAGAAACGCTGATATCTGAGCCGGAGATCGCGTCTTTTCAGGTTGAGGCTATTCTGACAGAGCCAAATGAATTCGATAATAATCAAGAGGAGGAAGAGGAAATAGAAAACGATAATCAGACCCAAAACTACGATACTGTCGACATGGAGTCCGATCACGAGATTGAGATCGCTCGTCAGCAGGAAAATGAGACTGGAGATGACATTGAAAAGAATGACTTAGTTGAAAACGACGAGAATGCAAATCAAGGACAAGATCAAGAAAATCATGTCGATGAAATTGAGAAGCATGATGAAAGCGATAATGAAGGGGACCAGGACACCCTCGACAGTCAAGGAAATATGGAAATTGATGAAAGCTGCACGCACGCAAATATCGATGACATAAGCAAAATAGATAAAGATGACAACGATGAAGGCGAAAACGATGAACAAGAAGTAAATCCCGATGCGGATgataacgatgatgatgaagacaTGCCGCCGCCTCCCGCCGTAGAGATAAACGACGAGACGCAACAGTCGTCGAGCGAAATGAACGAGGAAGATGAAGAACTCGATGAAACGGCCGATCTCAACGAAACGGGCGACCACAAACCGTCAGAACTTGACCCGGACAAGACTTACGTTACTAAATCTCAAAAGGATTTCATCGAAAAGTACCGCGATGTCATCCAACAGATCAACACAAAGAGGTGTCTCTGTTGTGATAAGACATACCCGCGAAGAAAGGCGGTCGTTCAGCATCTGCAGAAAAATGGACACAAAGTTCCTAAACATACTTGTTATAACTGCGTGATTACGTTCACTCATATTGGAGCGTTGCTCAGTCACATGAGAGCGAACGCTTGTACAGATCTCTGGAAAATCGTATTTGATAAGAACGGTATTCCAGATGATATGGTCATCAAATACGAGCCTCAAACCAAGATACATTCTAAGGATATTTTCAACGCTCGATCTTATGCTTGTAGACTCTGCCCGGCCAAGTTCCAATTGAAGCAATCCATAATGAAGCATGTATTGGATGTGCACGAGGACGGCCAGTCGAATGTCCCGCTCGGCTGCGTCCACTGCCGCACAAGCTTCAAAGACAAATCCCTGCTCAAGAAACACATTCGCGTCGGCGAATGCACAGTATACATCAACTGTGATTTATGTTCAGAACAATATTCGAACATGCAAGAGTTCAGCGAACACGCTCTGACGATCCACGCCGACCATTTCGAGAAGTCCGACAATCAGAACAAATGCATCGACGGCCGAGCCACCGACTGTTCCATCTGCGGAAAGAAGAACAGCAACTATTTGAATcttgtgaaacatttgaagatGGTCCACAACGAAGACAGGCCGCATTACTGTCAAAATTGCGATGCTAAATTCGAGCACGCCGCTGATCTGAATAAACACATTTATGCCGAGCATTCTGACCAAGCGTTGGGGATGACGCCGCAAGAGCCGGACATGAGTCTCGTGAAAGAGGAAGCCGAGGAGTATCACTACTCGTGTACAGAATGTAACGCGATATTCGAAACTGTCGACGCCTGGACTGACCATCAAGTGGCTGAGCACAATCAAGTCGCACATCACTGCGACCAGTGCGACAAAAAGTTCTTGCGACCGTCAGAACTGGCCGAGCACAAAAATACCCACTTGAGAGTCAAGTTCTACTCTTGTAGTGGTTGCCCCAATTCGTACAGCACTCCTCAAAAACTGTCCGACCATGTTCAGCAAGCTCACCCACCCGGTGGCGAGACAGAATTCTTCTGTGATGTATGCATTCGGTCCTTCAAAAGTCGTCAGGCCTTCTCGAACCATATGCGTATCCACGCTAAAGTGCCGACTACGAACAGAAAGCCGGGTGAACAGAAAGGATTCGATCCGCGAATTATCGGCAAGCCCGTCAAACAATTCACCATGGTTCAACCCGGTTTCATCAATTTCAAGCCAAGTGCCAACGTTCCTAACGCGCCCTACTCGTGTGATATTTGCGGTAAAGGCTTCATGCACAAGAAAAATATATGGAAACACAAAAAAGTGTTGCACGCGGATATTATCAATGATAGAAACGATAGCGAAGATAATACGATGCACGCCTCCACGGAAGACGACGATTACAACCCCGACGAGAATGGAGCCCTTTCCACGCCTCAATTCAACAGTTTCAACTTCTCCAACTTTAGCAACAGCACACCGCAACCACAGCAGCCAGATGCGATGCCGTATTCTTGCGAGCTATGTTTCAAGCGATTCCCGATTCGAACCAGCCTCTGGAAGCACAAACGCGCTAAACACGGGATCGTGAACCCCGGGGCCAGCTCCGGGAACGAGACGCTCGCGCAACCAAAGTCCGGAGAATCCAGTCGGTCCAGCTGCACGATTTGCAAAATAACATTTGCAGACAAGAAATCGTACTACCGTCACAGGAAGAACGTTCATAAAACCGCCACGGAAATGTGCAAACTTTGTGGCAAACCGCTGAATTCTACTCTAGAATTGTACGAACATCTGAAAGCCGCACACGCTCGAGAACTACTAGGATACAACGCGAATCAAGGCTCGAGTAAAACACCGGACGTGTCTCAGGATCAGGACGCCGATTACGAAAACGAAACGGAAACGGCCGACCCCACCTTGGATTACCAAGCTCGATATCCCTGCGATACTTGCGGGAAGCAGTTTGTCGGTCTCCTCGCACTACAGAACCATCAGTGTATAAATCAGCTCCCTCAGCAACCGCAGACCTTCGACTGCGAGATCTGCCACAAGAGTTACACGTCCATAGCCGCATTGAAGAGTCACCGCGGTTGGCACCTGCGCTCCCCGGACGGGAAGGCGGCTGCCAACAACAGCGGGCTTTGGATGCCGCAACACAAAGTAACGAGTAAGGTCAGCAAACACGAGGTCGTCGACGCGGTGCAGTTGGCGCGAGTTTCCCACTCGACCCCCGTCTCGCATTCGGCGCCCGCCGCGGCCGTCACGGCCAAAAGGAGACTCCCACCGGAGGTCGAAGTCACAGTCGTCAATCCAAACAAAAAACTCCGCTCCGACGACTCGGTCGAACTGGACCAGCAGAGCAACGAAGCGGTCGACGGGCGATACTGTACCATCTGCGACAAAGAATTCACGAAACGCGCGGCTTATCAGCGTCACATGGACGAGGTTCACCAGCCGAATTCCGTCTTCTGTCCGGTTTGCGACAGAAGTTTCACGAGGAAGTCGACGCTTCTCGTGCATATGAAGAAGCATTACGAGAGCGGGGAGGGTACGTCTACGACGCAGGTGGAAGACGACGAAGGCCATAGCTGCGATGTTTGTGGCGCTGTGTTCGACAGTGAGAAGGGGTTAAAGGCTCATCGGGCGAGACACCACGCGGATGATTCCGAGGAGTCGGAGGACGAGGGCAACGCGCCAATTATTCCTCCGGGAGAGTTTACTTGCGGACAGTGCGGCGACGGTGTTGCCAGCCCGCGCGATCTCCTCGCTCACCGGTCGATGCACGCAACTGCCACCAAATTCTTCTGCAATATTTGCAAGGTTTATTTCGCGCGCGCCTTGGACCTTTCCTCGCATACTCGCGCGAGACACGCGGATAATGACAAAGTGTTCTTCCCGTGTGCCATGTGCGACCGCTTCTATATGAATAAGAAGAGCTTGCAACGGCACATTGAGATGGCGCATTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDTEPPVLVTKIKDCVSVQINENDELPTNVCRKCMDNVNNWHIFKTVCAKTQNKLQSLIKKDGSLLEEVKIKSEPFYDEAYDDGVVIDGSYPVIENVATTSKLQPEGPPILASLGLTPRSDKSVDPRTDWHRVHAILDMVQENNIIDSLQSTEETDILHHSDHDSESEGELQPDLDDTYIHCDKGYKCRDKSIIYKNPQADTNSINQTNKVKKRKAVAVKHCPRPKNAWQLLFTDDLLELIVASTNENIIRHGKSHCTITTADEIKTLIGILYLHGIMRPTYQDYSDLWDGYCGISCIKKAMPQERFRFLIQHLSFDTQNDDALILFDIMKRMRKAFEIFAMNCRTAFEIETVAVVDEIIVPVYGPCPFRYDIDKKALKRGIKMVLLIDPTNFYISNLDVITDPYFGADEIVKKITQHLFESGRTIVMDSWYFSKPLMNVLKNYNLYTVAALNPKNEKIPPLFLSQYRKTRTFMSGFLKDEISLTSYVDSQSKSINVMTNEPKFYRRGPNIKHVTAVSVYKKNQSAVEVVDVLMHYYTTMQHTNDWTLSLFFTLLNIASVNAQGVESENNEEDDYEEEPDPDPEPEPEPPQPVKVPNMPEVSITVMRNTGETLHARQGIQQLASKDCLICGRSYRYSHNARRHELASHSFDRYTNKVTHKKSHHSRMMPKLRPNPFNPKSRLMPNPISHKLQFMSKNIPAKIIPQKVNPPPKPIPIKQLKASHNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILTEPNEFDNNQEEEEEIENDNQTQNYDTVDMESDHEIEIARQQENETGDDIEKNDLVENDENANQGQDQENHVDEIEKHDESDNEGDQDTLDSQGNMEIDESCTHANIDDISKIDKDDNDEGENDEQEVNPDADDNDDDEDMPPPPAVEINDETQQSSSEMNEEDEELDETADLNETGDHKPSELDPDKTYVTKSQKDFIEKYRDVIQQINTKRCLCCDKTYPRRKAVVQHLQKNGHKVPKHTCYNCVITFTHIGALLSHMRANACTDLWKIVFDKNGIPDDMVIKYEPQTKIHSKDIFNARSYACRLCPAKFQLKQSIMKHVLDVHEDGQSNVPLGCVHCRTSFKDKSLLKKHIRVGECTVYINCDLCSEQYSNMQEFSEHALTIHADHFEKSDNQNKCIDGRATDCSICGKKNSNYLNLVKHLKMVHNEDRPHYCQNCDAKFEHAADLNKHIYAEHSDQALGMTPQEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYSCSGCPNSYSTPQKLSDHVQQAHPPGGETEFFCDVCIRSFKSRQAFSNHMRIHAKVPTTNRKPGEQKGFDPRIIGKPVKQFTMVQPGFINFKPSANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEDNTMHASTEDDDYNPDENGALSTPQFNSFNFSNFSNSTPQPQQPDAMPYSCELCFKRFPIRTSLWKHKRAKHGIVNPGASSGNETLAQPKSGESSRSSCTICKITFADKKSYYRHRKNVHKTATEMCKLCGKPLNSTLELYEHLKAAHARELLGYNANQGSSKTPDVSQDQDADYENETETADPTLDYQARYPCDTCGKQFVGLLALQNHQCINQLPQQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDAVQLARVSHSTPVSHSAPAAAVTAKRRLPPEVEVTVVNPNKKLRSDDSVELDQQSNEAVDGRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDRSFTRKSTLLVHMKKHYESGEGTSTTQVEDDEGHSCDVCGAVFDSEKGLKAHRARHHADDSEESEDEGNAPIIPPGEFTCGQCGDGVASPRDLLAHRSMHATATKFFCNICKVYFARALDLSSHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: iTF_00206309;
80% Identity: -