Bbet015091.1
Basic Information
- Insect
- Biston betularia
- Gene Symbol
- -
- Assembly
- GCA_905404145.1
- Location
- FR989873.1:606163-615480[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-10 9.7e-08 32.2 0.0 4 39 174 210 171 214 0.90 2 4 5.8e-11 3.7e-08 33.5 0.3 2 39 226 263 225 266 0.92 3 4 5.2e-16 3.4e-13 49.7 0.2 2 45 281 325 280 325 0.96 4 4 2.5e-17 1.6e-14 53.9 0.0 1 41 332 373 332 376 0.94
Sequence Information
- Coding Sequence
- ATGCCTGGGAATGGACCGTTTCAAGTAAAATGCGAACCACCTTCTGATGAAGAGGAAAATTGTCCGCAACTATCTGAGATATTCCCTAATGATAAGCTTCCCTCGGAATACCGCTGTGCAAAAATAGAGGTCAGACGTAATGATGAATGTCCTTCTACAAATTTGTTGCAGCATTTGCAGTCAACATCAAATTTGGAAGAGTTGGCACCGCTGGCGCCAGCGGGTCCTGCCGCGACGCCTGTCTGCGTGAAGCAAGAGCCTGTCGACACCCCCGCCCTCACGCTCGAGACCCTCGAGTCCAACCCACAAAATATGAGAGGTTCACTACTGGCGAGGCACAGTATGGCGATCTTGAACTCCACCGATGAGCTTGACTCTGCGAGTTTCACACCTTTGTTAATTAAAGACGAACCTTCATCGGAGGGAGAGTTCCAACATCTGAGCAGTGACGAGACAAGCGACGGGTGCCGGGAGGCGGAGCCGGCGGCCCGCGGGAGCCCTAAGAGCTGGACGCAGCGTGACATGGAGCATGCACTCGACGCGCTGCGGAACCATCACATGAGCCTAACTAAGGCATCAGCTACATATGGCATTCCATCAACGACGCTGTGGCAGCGTGCACACCGACTCGGCATCGACACGCCCAAGAAGGAAGGTAGCGCCAAGTCGTGGTCTGAGGCCGACCTGCGCGGAGCACTGCACGCCTTGAGGGCCGGAGCCATCTCCGCCAACAAAGCTAGCAAGGCTTATGGAATACCTAGCAGCACTTTGTACAAGATAGCCCGCCGTGAGGGAATCCGCCTGGCAGCCCCATTTAACGCGGCGCCCGTGTCGTGGCGGCGCGGGGACCTCGCGCGAGCGCTGGCTGCCATCCGCACCGGCGCCGCCTCCGTGCAGCGTGCCGCTGCGCAGTATGGGATACCGACTGGGACTCTGTACGGGCGGTGTAAAAGAGAAGGTATAGAACTGTCTCGGTCTAACCCGACGCCGTGGTCTGAGGATGCAATGGGAGAAGCTTTGGAAGCAGTCAGAGTGGGTCAAATGTCCATAAACCAAGCAGCCATTCATTTTAACCTACCATACTCATCACTTTACGGAAGATTTAAAAGATGCAAATATCTGGCTCAGGCTCAGCCGATGGTGCAGCAAGAGATTCCCAACAACGCTGAATCACTGGCCCCGCAACAACAAGATGTCTCCTATTACCATCCAAGCCAACACATGGCAGAACCGGACAACACTGCAAACCAATATTCACAGAACGACTACAACCAACCTACATCGACACAATACAACAATGTCGTTATACAGGACTCATACGTCGGGCAAACGATGTATTACAATCAACAGTTTAATGGCATCGCTACCAGCTGA
- Protein Sequence
- MPGNGPFQVKCEPPSDEEENCPQLSEIFPNDKLPSEYRCAKIEVRRNDECPSTNLLQHLQSTSNLEELAPLAPAGPAATPVCVKQEPVDTPALTLETLESNPQNMRGSLLARHSMAILNSTDELDSASFTPLLIKDEPSSEGEFQHLSSDETSDGCREAEPAARGSPKSWTQRDMEHALDALRNHHMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGSAKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVSWRRGDLARALAAIRTGAASVQRAAAQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCKYLAQAQPMVQQEIPNNAESLAPQQQDVSYYHPSQHMAEPDNTANQYSQNDYNQPTSTQYNNVVIQDSYVGQTMYYNQQFNGIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00033740;
- 90% Identity
- iTF_00206919;
- 80% Identity
- -