Basic Information

Insect: Bicyclus anynana
Gene Symbol: -
Assembly: GCA_947172395.1
Location: OX359212.1:7176824-7180909[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.00018 1.2 9.5 0.0 19 48 152 181 143 185 0.86

2 6 0.054 3.7e+02 1.5 0.1 22 52 211 241 206 242 0.83

3 6 0.0046 31 4.9 0.1 15 45 264 294 253 298 0.76

4 6 0.016 1.1e+02 3.2 0.2 21 52 298 329 294 331 0.90

5 6 5.7e-06 0.038 14.3 1.0 11 48 343 380 333 384 0.83

6 6 0.083 5.6e+02 0.9 0.2 23 48 412 437 404 440 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.00018	1.2	9.5	0.0	19	48	152	181	143	185	0.86
2	6	0.054	3.7e+02	1.5	0.1	22	52	211	241	206	242	0.83
3	6	0.0046	31	4.9	0.1	15	45	264	294	253	298	0.76
4	6	0.016	1.1e+02	3.2	0.2	21	52	298	329	294	331	0.90
5	6	5.7e-06	0.038	14.3	1.0	11	48	343	380	333	384	0.83
6	6	0.083	5.6e+02	0.9	0.2	23	48	412	437	404	440	0.86

Sequence Information

Coding Sequence: ATGGAAGAAGAGTTAGGAAGCATAACAATTAAGATCGAACCCCAAGACAGCAGTGAACTGGACAGTTTCTCTGCCTCATCTGATCATTGCATTGAAGACTTCGATGATATTAAGAAAAAAAATATTATTAGTTTGCAAAATGAAGACCAAAAACCAGTGTTGGAGCCAGAGTTTGTCAGTATTAAAAAGGAACCGGGATTAACTGTTGACGCTGTTAGCACTGAGCCCACGTCTGCAAATACAAACTCTGATGATGAAAACTGGCATAATGTACCAATCAAAGAAGAATGCCATAGTATAAATGTGGAAGTGTGTATTAAAGAGGAACCAACTGAAGCAGAAGTGCAAATTCAACAAGGTCCTGACTATATTATACCAGATGATGTTCCACAAATACCAAAACCATGCAATGTGTTTATAAGTGATGGTTCTGACAAAATTCTAGATTTGCGCTCAGCGGTCGATGGTAAGTTTATGTGCCCAATATGTCAGAAATCTTTCGTAAACAAAGGGAACCTGAGCCGACACTTGATGATAACACACACACGGGAAAAGCTGGAGTGCAACGTGTGCTTTCGAGAATTCATCAAACAGGGCCATTACCAGAAGCACCTCCTCACGCATTCCACTGAAAAAAGGTTTAAATGTGAGGAATGTGACAAGCGGTTTCGCACTTCTTCCAATTTGGAACAACATAAACGCATACATCTGCTAGTGAAACCTTTCCACTGTCAAGTGTGTACGAGACAGTTTGCCGTCAAAGCTAACCTCGCGAAACACCAGGGCTCGGGCAGGTGTAAAATACCAAACCACGACCCAATAGTTTGCAACATCTGCAACAAGGTGTTCCAAAAGGAGTTCCTGCTTAAAAGTCATTTGCGTAAACACACGACCGAACGCCCTTACGTTTGCGACAAATGCAAAATGAGTTTCAAATACAAATCCACTCTAATACGTCACGTGCAGCTCCACAACAACATCAAACCGTACTCTTGTACTATATGCAAGAAGAAGTTCACCCATTCGGGTTTAATAAAGCCTCATATGAGGAAACATACCGGGGAAAAGCCATACTCCTGCCCTATATGTAACAAACAATTCGCTCACAAACACAACATGCAAAGGCATACATTGAGGCACGCGAAAATAAAGAATTTAGTTTGCGAAGTGTGCAAGAAAGTCTTTCCCAAAGAGAGTCGACTGATATATCACATGCGGACGCATACTAAAGCTAAGCCTTTTAAGTGTGGGGTATGCGGCAAAACGTTTTCGCACAGGCAAAACATAATAAGACATTATAGTAGGAAACATCCCAATGATACGTACAACTGTAAAGACACCGACGCGAGTGTGGCCAAAGACGTCTGGGAAAATGTTGTGCTACGGAAGAATATGGAAGTTAAAGTTGATATCACACATGTTACTAAGAATGAAGAACTATTGAAGGATTTTAAAAGTGAAGAAGAGGAAGAGGAGATTATAGGAAAATAA
Protein Sequence: MEEELGSITIKIEPQDSSELDSFSASSDHCIEDFDDIKKKNIISLQNEDQKPVLEPEFVSIKKEPGLTVDAVSTEPTSANTNSDDENWHNVPIKEECHSINVEVCIKEEPTEAEVQIQQGPDYIIPDDVPQIPKPCNVFISDGSDKILDLRSAVDGKFMCPICQKSFVNKGNLSRHLMITHTREKLECNVCFREFIKQGHYQKHLLTHSTEKRFKCEECDKRFRTSSNLEQHKRIHLLVKPFHCQVCTRQFAVKANLAKHQGSGRCKIPNHDPIVCNICNKVFQKEFLLKSHLRKHTTERPYVCDKCKMSFKYKSTLIRHVQLHNNIKPYSCTICKKKFTHSGLIKPHMRKHTGEKPYSCPICNKQFAHKHNMQRHTLRHAKIKNLVCEVCKKVFPKESRLIYHMRTHTKAKPFKCGVCGKTFSHRQNIIRHYSRKHPNDTYNCKDTDASVAKDVWENVVLRKNMEVKVDITHVTKNEELLKDFKSEEEEEEIIGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00205380; iTF_01021516;
90% Identity: iTF_00205380;
80% Identity: iTF_00205380;