Basic Information

Insect: Bicyclus anynana
Gene Symbol: -
Assembly: GCA_947172395.1
Location: OX359230.1:3134421-3144595[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 8.4 4.6e+02 1.8 2.8 1 23 244 270 244 270 0.75

2 8 4.7 2.6e+02 2.6 0.3 2 22 299 319 298 321 0.86

3 8 0.00034 0.018 15.6 0.3 2 23 342 363 341 363 0.96

4 8 0.85 46 4.9 1.0 1 23 367 389 367 389 0.96

5 8 9.5e-05 0.0052 17.4 1.2 1 23 394 417 394 417 0.90

6 8 3e-05 0.0016 19.0 0.5 1 23 450 473 450 473 0.98

7 8 0.0012 0.067 13.8 0.4 1 23 479 501 479 501 0.96

8 8 0.00055 0.03 15.0 0.2 1 23 507 529 507 529 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	8.4	4.6e+02	1.8	2.8	1	23	244	270	244	270	0.75
2	8	4.7	2.6e+02	2.6	0.3	2	22	299	319	298	321	0.86
3	8	0.00034	0.018	15.6	0.3	2	23	342	363	341	363	0.96
4	8	0.85	46	4.9	1.0	1	23	367	389	367	389	0.96
5	8	9.5e-05	0.0052	17.4	1.2	1	23	394	417	394	417	0.90
6	8	3e-05	0.0016	19.0	0.5	1	23	450	473	450	473	0.98
7	8	0.0012	0.067	13.8	0.4	1	23	479	501	479	501	0.96
8	8	0.00055	0.03	15.0	0.2	1	23	507	529	507	529	0.98

Sequence Information

Coding Sequence: ATGAGTGAGTTTTGGCTAACTATTGCTACAGAAAACGTTCTCGACAAATGCAAGTGTTGTTTAAGTGAGATGGAACTGAAGACTCTTTGGGATCAACACGAATTCGAAGGGGACGGAGAAGTTTACGGCGAAATGTTGAACGAATGTTTTGGTATTTCGTTTCACCAACCTGACCCATCAGAGCAAATTTGTGAAGTATGCATAGTACGGTTGAGGGAAGCACTTGAATTTAAAAAGGAGATCTTAGCTACACAGGAGATGTTGCAAGAAGGTGCACAAGTTGTAAAGGAGGAGGTATTAGATGAAGAACCGGAGGATGTGCCTACAACTTATGATAATGTGGAGTTTCTTGAGGAAGAGGACAAAAGCGACGATGACTACATACCAGATGATGCGTCCTCGAGTCCCGAAGATTCGTCGCCAGAGTCTCCCAAAAACAAGTACCCTAAGAAGTGTGAAAAGAAGACATATAAGCAGTATACTAGAAAAGATCTACAAAATGCTGTGTGGGAGGTCCGGAATGGGAAGATGGCGTGCGCTGAAGCAGGCAGAACATACGGAGTGCCTCGGAAAACTATTCAGACAAAAGTCAGAGAATCCAAGTCGGAGACTAGCGATGTTGTCAAGGTCAAAGAGGAACCCAACGAAAAATTCTGTAAGTTTCTTGAGGAGATCCAGACGCTCCTCACATACACCAACGCTACACCGTTCAAGTCGCGAGGGTGCAGATACTACTGCTTCTACTGTTCCACCAACGGACCACTCTTCGAAGACCCTGACGAGCTCCGCAGCCACACAACCACCAAGCACGACAAGGAGAGAATCACCAACATAGAACTGTACATGAAACCGCAGTGGATGAATGAGATCATAAAGTTTGACATCACAGACTTACACTGCACCGAATGTTTGTTGATGTTACCGGATTGGAATAACATGTTTGTGCATTTTGCTGAAACACATGACATTGGATTCGACGAGGCATACACCAGAGTGATACCGTACTCTCTGACTGTGGATCTACAATGTGTTCTGTGCCATGAGAACTTTGCCAACTACGGTAACCTCGATGCCCACATGAACTTGCACTTCAGTAACTATGTGTGTTTCAAATGTGGTGACACGTTTCTGTCTGTCTCACGGTTCGATAAACATTTGTTGACCCACCAAACTGGTCACTTTCCATGTCCAAAGTGCGACAAAGTGTTTTCTTTAAAAAAGTATATGACGAGGCATTTCACTTTGGTGCACAAACAGCAGACTCCGAAGTGTGTGTATTGTAAGAAGAGTGTCGAAGGACCTATGCATAGGCATATAACCAAGGAACACAGTGAAAAAGTTAAAGCGTTCACGTGTGAAGTGTGCGGTAAAGTGTTCACTTGGAAACCATATTTTGTTGCGCATATGCGGAAGAGGCACAATGGCATAAAAAAGTTCAAATGTGAGTATTGCCCTAAAATGTTTCTAATGCCATATGAGTTGAAAAGTCATAGCATAATCCACACTCGTGCTAGACTGTTTGAGTGCGGAGAGTGCAAAGCGACATTCAACACCATTACTGCTATGAAAAAACATATATCTGTTCATAAACCAAGTGGGTAA
Protein Sequence: MSEFWLTIATENVLDKCKCCLSEMELKTLWDQHEFEGDGEVYGEMLNECFGISFHQPDPSEQICEVCIVRLREALEFKKEILATQEMLQEGAQVVKEEVLDEEPEDVPTTYDNVEFLEEEDKSDDDYIPDDASSSPEDSSPESPKNKYPKKCEKKTYKQYTRKDLQNAVWEVRNGKMACAEAGRTYGVPRKTIQTKVRESKSETSDVVKVKEEPNEKFCKFLEEIQTLLTYTNATPFKSRGCRYYCFYCSTNGPLFEDPDELRSHTTTKHDKERITNIELYMKPQWMNEIIKFDITDLHCTECLLMLPDWNNMFVHFAETHDIGFDEAYTRVIPYSLTVDLQCVLCHENFANYGNLDAHMNLHFSNYVCFKCGDTFLSVSRFDKHLLTHQTGHFPCPKCDKVFSLKKYMTRHFTLVHKQQTPKCVYCKKSVEGPMHRHITKEHSEKVKAFTCEVCGKVFTWKPYFVAHMRKRHNGIKKFKCEYCPKMFLMPYELKSHSIIHTRARLFECGECKATFNTITAMKKHISVHKPSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00205062; iTF_00205611; iTF_00205059;
90% Identity: iTF_00205062;
80% Identity: iTF_00205062;