Bany006268.1
Basic Information
- Insect
- Bicyclus anynana
- Gene Symbol
- -
- Assembly
- GCA_947172395.1
- Location
- OX359230.1:3148329-3158963[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.1e-10 4.1e-07 29.8 0.0 1 37 165 202 165 207 0.90
Sequence Information
- Coding Sequence
- ATGAGTGAGTTTTGGCTAACTATTGCTACAGAAAACGTTCTCGACAAATGCAAGTGTTGTCTAAGTGAGATGGAACTGAAGACTCTTTGGGATCAACACGAATTCGAAGGGGACGGAGAAGTTTACGGCGAAATGTTGAACGAATGTTTTGGTATTTCATTTCACCAACCTGACCCATCAGAGCAAATTTGTGAAGTATGCATAGTACGGTTGAGGGAAGCACTTGAATTTAAAAAGGAGATCTTAGCTACACAGGAGATGTTGCAAGAAGGTGTACAAGTTGTAAAGGAGGAGGTATTTGATGAGGAACTGGACGATGTGTCTTCAACTTATGAGACTGTGGAGTTTATTGAGGAAGAGGACAAAAGCGATGATGACTACATACCAGAAGATGCGCCCTCCAGCCCCGAGGAGCCAGTACCAGCACTTCGCAAAACTAAGTACCCTAAGAAGCTGGCTCGGAGTCAAAGGAACAAGACATACAAGCAGTACACTAGGGAAGATCTACAGAATGCTGTGTGGGAGGTTCAGAATGGGGGCATGTCGTGTGTAGAAGCCGGCAGGATGTACGGAGTGCCCAAGGGAACTGTGCTGGCTAAAGTCAACGAGTCTATGTCAGAACCTAACAACTTTGACGAGCTCAAAGAGATCACCAACGATAAGTTCTACAAGTTTGTCAAAGAGATCCAGAAGCTCCTCACATACACCAACGCTATACCGTTCAGGACACGAGCAACCAGATACTACTGCTTCTACTGTTCCACCGACGGACCATTCTTCGAAGACCCTGACGAGCTCCGCAGTCACACAACCACCGAGCACGACAAGGAGAGAATAACCAACATAGAACTGTACATGAAACCGCAGTGGATGAATGAGATCATAAAGTTTGACATCACAGACTTACACTGCACCGAATGTTTGTTGATGTTACCGGATTGGAACAACATGTTTGTGCATTTTGCTGAAACGCATGACATTGGATTCGACGAGGCATACACCAGGGTGATACCGTACTCTCTGACTATGGATCTGCAATGTGTTCTGTGTCACAATAACTTTGCAAACTACGGTCTCCTCGATGCCCACATGAATTTGCATTACAGCAACCACATCTGCTTCAAGTGTGGTGACACGTTTCTATCGGTCCCACGTTTCGAGAAACATTTGATGGTTCATCAAACCGGTATCTTCAAGTGTCCGAAGTGTGATAAAGTGTTCGCTTTGAAGAAATACATGACGAAGCATTTCACTTTGGTGCATAAACAGAAGACGGCAAAGTGTGTGTATTGTAAGATGAATGTCGAAGGACCGATGCATTTGCATGTTAGTGAGAAACATAGTGAAAAAGTGAAACAGTTTACGTGTGAAGTGTGCGGTAAAGTGTTCACTTGGAAACCGTTCTTCTTAGCGCATATGCGGAGGAGGCACAAAGGTATAAAGAAGTTTAAATGTGAGTATTGCCCCAAAATGTTTTTAATGCCGTACGAGTTGAAGACTCATCTCATAACTCACACTCGTGCTAGACTGTTTGAGTGCGGAGAGTGCAAAGCGACGTTCAACAACATTACTGCTATGAAAAAACATATATCTGTTCATAAACATCCGTAA
- Protein Sequence
- MSEFWLTIATENVLDKCKCCLSEMELKTLWDQHEFEGDGEVYGEMLNECFGISFHQPDPSEQICEVCIVRLREALEFKKEILATQEMLQEGVQVVKEEVFDEELDDVSSTYETVEFIEEEDKSDDDYIPEDAPSSPEEPVPALRKTKYPKKLARSQRNKTYKQYTREDLQNAVWEVQNGGMSCVEAGRMYGVPKGTVLAKVNESMSEPNNFDELKEITNDKFYKFVKEIQKLLTYTNAIPFRTRATRYYCFYCSTDGPFFEDPDELRSHTTTEHDKERITNIELYMKPQWMNEIIKFDITDLHCTECLLMLPDWNNMFVHFAETHDIGFDEAYTRVIPYSLTMDLQCVLCHNNFANYGLLDAHMNLHYSNHICFKCGDTFLSVPRFEKHLMVHQTGIFKCPKCDKVFALKKYMTKHFTLVHKQKTAKCVYCKMNVEGPMHLHVSEKHSEKVKQFTCEVCGKVFTWKPFFLAHMRRRHKGIKKFKCEYCPKMFLMPYELKTHLITHTRARLFECGECKATFNNITAMKKHISVHKHP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00205596;
- 90% Identity
- iTF_00205611;
- 80% Identity
- iTF_00205611;