Bany010151.1
Basic Information
- Insect
- Bicyclus anynana
- Gene Symbol
- -
- Assembly
- GCA_947172395.1
- Location
- OX359222.1:2472169-2476033[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.4e-05 0.00074 20.0 2.7 1 23 272 294 272 294 0.98 2 12 0.11 6.1 7.7 1.1 5 17 399 411 396 417 0.88 3 12 0.0035 0.19 12.4 1.7 2 23 428 450 426 450 0.89 4 12 0.00039 0.021 15.4 1.3 1 23 454 476 454 476 0.98 5 12 0.00048 0.026 15.1 0.6 2 23 498 520 497 520 0.93 6 12 0.19 10 7.0 0.6 1 23 524 547 524 547 0.91 7 12 0.15 7.9 7.3 0.6 2 23 570 592 569 592 0.89 8 12 4.1e-05 0.0022 18.5 2.8 1 23 602 624 602 625 0.96 9 12 0.012 0.64 10.8 0.6 2 23 641 662 640 662 0.96 10 12 0.00042 0.023 15.3 1.1 1 23 668 690 668 690 0.96 11 12 1.2 64 4.5 3.9 1 22 696 717 696 720 0.90 12 12 0.14 7.7 7.4 0.0 3 23 803 823 801 823 0.96
Sequence Information
- Coding Sequence
- ATGGAATCACAAAACATATGGGAAACAGACATGGCTGGTAACAATGTCAACACCATAAAAGAAGAACTCAATACTAACATCACACTGGACTTTGACCCAGAATATGATGGGGAAACTTTGAATCCAGAAGAAAACATTGACGATGATCAATTGAATGTTAAGGAAGAGTACATAATGCCCAACTATGAATCTGATCATGAACATATTGAAAAATCAAACATTGATATCACAGAGGCAGTGTCTAATAAATTAGTCTCACATCTAGAAAGTATAACAGGGCAGAGTAACTTCTCAAAAAATGCAGACGTCAAAATGGAACAGTTTGACAATTTAACAGATGAGTACCCCAACATTGACGATGGATCCATGGACAGTGATGAAGCAAGGGCTCTTAATAATGTGGAAGCTTGTTTGCAAGATGAAATAGACATTAAACATGAACATAATGTGGAACACCTTAAAGAAGATCTACAAACCTTTATCAAAAGAGATCCAGATTTAACAGTCACTGAAACCAACTTAATATCAAACAAGGTAATCAACACAACATCAACTATAACTAATCCTCATGCAGGTATCATTCAATCTGAAACAACAAAGACATTAGTTATGGAAATACACCCCATGGTACAAGGTGTTAAAATACCAATGCTTCGAAATCCTGAAGAAATATTATCTACAAGTTATTCTACAGATAGTATGTTGCATGAAGAATCCTTCCAACTTAATTCTATAACTGGTAATGTATTATCACTCGAGCAAGAAGCTTATGGGTTGTTAAAAGAAGGACATTGTGACTACAATGACAAAAGATACCATTGTGAAAAGTGCCCCAAATCTTATTCAAAATCAAAAGGCTTAAGAGAACATATGAAAGTCCATGATACGATAGAGAGAAGAGCATTGGGCGTTATAAAAGGTTTACAGACCAAGAAAGCGAACTTGGAGAAACGATTGTATGGTGTACAGAAAAGGGTTAAAAAGATTGATATACAGGCTTTAAAGAAAAAAATGGAAAGGTCAGAAAGGGCGGAAAATCGGACTAAAGTAAAATCTGAAAGAAAACCTAATTTAAAAAAAGAAAAGAGTGAAAAATTAGCTAATCTCAAAAAGGAAACTGAAGAAAAAATCACCAATCTTAAAAAGGAATTGGAAGAGCAACCTAGTGACGTACAAAAAGATGGGCACAAATGTATATGTGGAAAAATATTTAAGAGGAAAAGTAGTTTATTAGCATGTTTGAGATCTCATGAAATATCCACAGACGCAAACTCTTGTTTTCCATGCATTTCGTGCACCAAACAATTTAAGGACAAGGAAGAACTGGCGGCGCATCGACGACGCATGCATAGAAAGCGTTTCCCATGCAAATTTTGCCCAACAGACTATAACACGCGAAAAGAACTGTTCAAACATCTTCAGATACACCAAAAAGTTCAACTGACGGAATATAAAGTGATATCTGAATTTGTTAAAGGGAAGCAAAAGCTAAAGTGTTTTATGTGCTCGAAAAGTTTTTCAGAACTATCAGACTTGAAGTACCACGTCATGGAAGACCACCAAGAGCCTTATATTTGTCCTCATTGCAATGGAACTTTTGCGAAAATAATAGATTTCGGAAATCACACTAAAGCATTCCACCCAGAGGTCGAAGGAAAGTCAGTTTTGGATGTTCTCGAAGCTTTTTCGAAGTTGGTACAAGCTTGGAAATGCGAGGATTGCAATGAACAGTTTCACGAAGCCGACAAGTTTGCTATGCACCAGGTAGAGAAACACAGTCCAGATGTTAAAGACAGAGATCAATTTCAATGTGAGGACTGTCGACGCATGTTCATCAGTCAGAAAGGATTAACATCCCACAAAAGAATACATCACAACACAGAAGTCATGGAGGAGACAGAACCTCAAGAACAAGGCGTAATGTGTGTTGAATGTCGAAAAATATGTAAAGACGACAACGCTTTGGCGTCTCACATGCGCCTACACTCCCCAGAGAGGCAGTATCCGTGCAAATTCTGTGATTTCCGTTTCGCAACTTCAGAAAAACTCAAAAACCACTCCGAAATACACACCGGCGATATGAAATACGTGTGTTTCATTTGCGAATATCAGTGCAGTTCGGAGAACAGGTTGGAACACCACAAGATGTCGCTAAAGCACGCGAACATGAAAGAATTTTTGCGGACGGGGAAACACTTGCTGGAGGAAGAGAGTACATCTAAGAAACGGGAGTCCAAACAAGACGACAGAGAAGTTAAAAAAAGGAAGGAGCACAAAGACAAGAAAAAAGAACACAAAGATAAGAAAAAGGAACACAAAGATAAGAAAAAAGAACACAAAGATAAGAAAAAAGAACATAGAGATGTTAATGAAGAAGCGGGTTGTTCTAAAGAGGAGACGGTGATATGTGACGTGTGCGGCGGCATGTTCGCGAGCGAAGAGTTGATGGTTGAACACAAAGAAACGCATCCCTTTATAGTGTTCCCTAATGAAGACACGCCTACTAGAATATTCTTTAAGTGA
- Protein Sequence
- MESQNIWETDMAGNNVNTIKEELNTNITLDFDPEYDGETLNPEENIDDDQLNVKEEYIMPNYESDHEHIEKSNIDITEAVSNKLVSHLESITGQSNFSKNADVKMEQFDNLTDEYPNIDDGSMDSDEARALNNVEACLQDEIDIKHEHNVEHLKEDLQTFIKRDPDLTVTETNLISNKVINTTSTITNPHAGIIQSETTKTLVMEIHPMVQGVKIPMLRNPEEILSTSYSTDSMLHEESFQLNSITGNVLSLEQEAYGLLKEGHCDYNDKRYHCEKCPKSYSKSKGLREHMKVHDTIERRALGVIKGLQTKKANLEKRLYGVQKRVKKIDIQALKKKMERSERAENRTKVKSERKPNLKKEKSEKLANLKKETEEKITNLKKELEEQPSDVQKDGHKCICGKIFKRKSSLLACLRSHEISTDANSCFPCISCTKQFKDKEELAAHRRRMHRKRFPCKFCPTDYNTRKELFKHLQIHQKVQLTEYKVISEFVKGKQKLKCFMCSKSFSELSDLKYHVMEDHQEPYICPHCNGTFAKIIDFGNHTKAFHPEVEGKSVLDVLEAFSKLVQAWKCEDCNEQFHEADKFAMHQVEKHSPDVKDRDQFQCEDCRRMFISQKGLTSHKRIHHNTEVMEETEPQEQGVMCVECRKICKDDNALASHMRLHSPERQYPCKFCDFRFATSEKLKNHSEIHTGDMKYVCFICEYQCSSENRLEHHKMSLKHANMKEFLRTGKHLLEEESTSKKRESKQDDREVKKRKEHKDKKKEHKDKKKEHKDKKKEHKDKKKEHRDVNEEAGCSKEETVICDVCGGMFASEELMVEHKETHPFIVFPNEDTPTRIFFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01021647; iTF_01151544;
- 90% Identity
- -
- 80% Identity
- -