Basic Information

Insect: Bicyclus anynana
Gene Symbol: ham
Assembly: GCA_947172395.1
Location: OX359223.1:7444550-7449204[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00064 0.035 14.7 1.2 1 23 66 89 66 89 0.93

2 8 1.6e-08 8.8e-07 29.2 0.1 1 23 95 118 95 118 0.96

3 8 1.4e-06 7.5e-05 23.1 1.7 1 23 124 146 124 146 0.95

4 8 4.9e-05 0.0027 18.3 6.1 1 23 152 174 152 174 0.99

5 8 0.0001 0.0054 17.3 0.4 2 21 182 201 181 202 0.94

6 8 1.2e-08 6.4e-07 29.6 0.7 1 23 597 619 597 619 0.98

7 8 4.2e-07 2.3e-05 24.7 1.7 1 23 625 648 625 648 0.97

8 8 4.6e-06 0.00025 21.5 3.3 1 23 654 676 654 676 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00064	0.035	14.7	1.2	1	23	66	89	66	89	0.93
2	8	1.6e-08	8.8e-07	29.2	0.1	1	23	95	118	95	118	0.96
3	8	1.4e-06	7.5e-05	23.1	1.7	1	23	124	146	124	146	0.95
4	8	4.9e-05	0.0027	18.3	6.1	1	23	152	174	152	174	0.99
5	8	0.0001	0.0054	17.3	0.4	2	21	182	201	181	202	0.94
6	8	1.2e-08	6.4e-07	29.6	0.7	1	23	597	619	597	619	0.98
7	8	4.2e-07	2.3e-05	24.7	1.7	1	23	625	648	625	648	0.97
8	8	4.6e-06	0.00025	21.5	3.3	1	23	654	676	654	676	0.98

Sequence Information

Coding Sequence: ATGACAGCGTTACGTTTTTCTGCGCAAGTTATTCTGCGCACCTTTCATCGTGCGCTGCCGCCAACAGCGTGTTGTTGGCGGGCTTGCACGCCGCGGCCTGCTGCTTCTCGGTTGCGCACCTTTCACTTTTCAGGCGTTACTATTAAGACACTCGACCGTCACTTGGTGCAGGCGCACGCGCAGCCCGCGGCGGCGTTTCACTGCGAGCTGTGCAACCGAGCGTACAGCACCCGCGCGCTGCTGCTGCGGCACCGCGCGCTCACGCACACCGACATACGGAAATATCCCTGCGAGAACTGTCCGAAGGTATTTACCGATCCTTCCAACCTCCAGCGCCACATCCGCGCGCAGCACGTAGGCGCCCGCAGCCACGCGTGCCCCGAGTGCGGCAAGACCTTCGCCACCTCCTCCGGGCTCAAGCAGCACACGCACATCCACTCCAGCGTCAAGCCCTTCCAGTGCAAGGTGTGCTTCAAAGCTTACACTCAGTTTTCAAATTTATGCCGTCACAAGCGAATGCATTCGGCGTGCAGAGCTTTGGTAGAGTGTGGAAAATGCGGGCAGTCATTCACTTCCTATGCGTCTCTTACGAAGCATAAGCGATTTTGTGATACAGCAACGGCTGCGAACGTCAACCTACGAGGACAATTGCCACAAGGACTACCACAGATACCATCGTTATCCAACGTCATGAATACACCAAATAATACAAATCCATTCCCGATGTATAGAGGACCAGCGTTGCCTTTGCCCTACAACACGTTTGCTCACTATCCAGCATTATTTTCTGCTGCTGCAGCTGCTTGTCCCCCTGAATTCTTAAGTCCTTTGCTATTCAATGTTCAAGGAGCCAGACTAGCAATGGAGCACGACATGGCTATGAATGCTAATTTAGTTGCAAAGCAACAGGAAGGGAGGATGTCAGTAAAAAGCATGGACAGTACGAACTCGCTTGAGGACATGAAGAAATCCATGGACGTTGATATTGAAATAAAAAAGAGAGATACTAATGTCGAAAGAGTGGCAACACCACAAAATCTCTATGTAAAACAATCACCGCCCTCCGCTGAAGAAGCTTCTTCAAAACAAAGACCATCGCCAGTCATGCCAATGCCGACCGCCGTTGCTCCCTTCAGATTTTCGAGGGAAGAAATGAAACATAACTCTCCGTTCAACTTATCCATGAAGTTGAGTAGTGACGAAGTAGGAATGAAATCCATTTCACCGAGGCTGCCTAAAGATTTATCAAAAACTTTACGAGGAGAAACTGATAAAAAATCTGTATATTCAGACGTCGAAGAAGATTCAAGGAAGGATCAAATTGATCAACCACTTGATTTATCAGTCACACGAAAGAACAACGATAAAGAATCAGATGTGGAGAACGATGATGTTAACTCTTTTCGTAATTTATCAGTGAAATCGTACTCGCCCCCAGAAAGTCCCATAGATAGAGACAGTAAAACTCCTGAAAACGATACGACTGACGTAGACGTAGAAGCGGTAGAACCAAAGAGAGAAGAATCTCCTATGGTATCACCTTTAGCATTTCCTATGCCAGTGCATCCTCAACACAATAATAGCCTCATCGAGGCGATGTACCGCCCACGCTTTCCTCAGTTTCACACGGCTTCTGACTCTCTTTTGAGCTCTTCGCATTCCCCGTACGTGCCGAGCCCGTTCAATTTTTTATCCCCACTTCTCGGTACTGACGGTCCGGATAGACAACCGAGCGCGTACGCAAAGTTTCGTGAACTGAGCGCAGGTTCGGGAAAACTTCGAGATCGGTACGCGTGCAAATTCTGCGGAAAAGTCTTTCCGCGCAGCGCCAACTTGACCAGACATCTCCGAACCCACACGGGAGAACAGCCGTACAAATGCAAGTATTGTGAGCGGTCGTTCTCGATATCTTCGAACTTACAGCGCCATGTGCGAAACATTCACAATAAAGAACGGCCCTTTCGGTGTCCACTGTGTGACCGGTGCTTCGGACAGCAAACGAATCTTGACCGACATTTAAAGAAGCATGAGGCGGAAGGCGGCGATTCCCCTAGTTCGGCTGATACTGAGCAGGACGCGTGTTTTGATGATATTCGATCATTTATGGGGAAGGTAACCTGCTCCCCTGGAGTGGGGTCACCGTCGGGTACTTCCCCGCACACGCCCCACGGCCCGCATCGTCCCTCAGCGTTGGCGATCACCACATAG
Protein Sequence: MTALRFSAQVILRTFHRALPPTACCWRACTPRPAASRLRTFHFSGVTIKTLDRHLVQAHAQPAAAFHCELCNRAYSTRALLLRHRALTHTDIRKYPCENCPKVFTDPSNLQRHIRAQHVGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCKVCFKAYTQFSNLCRHKRMHSACRALVECGKCGQSFTSYASLTKHKRFCDTATAANVNLRGQLPQGLPQIPSLSNVMNTPNNTNPFPMYRGPALPLPYNTFAHYPALFSAAAAACPPEFLSPLLFNVQGARLAMEHDMAMNANLVAKQQEGRMSVKSMDSTNSLEDMKKSMDVDIEIKKRDTNVERVATPQNLYVKQSPPSAEEASSKQRPSPVMPMPTAVAPFRFSREEMKHNSPFNLSMKLSSDEVGMKSISPRLPKDLSKTLRGETDKKSVYSDVEEDSRKDQIDQPLDLSVTRKNNDKESDVENDDVNSFRNLSVKSYSPPESPIDRDSKTPENDTTDVDVEAVEPKREESPMVSPLAFPMPVHPQHNNSLIEAMYRPRFPQFHTASDSLLSSSHSPYVPSPFNFLSPLLGTDGPDRQPSAYAKFRELSAGSGKLRDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFRCPLCDRCFGQQTNLDRHLKKHEAEGGDSPSSADTEQDACFDDIRSFMGKVTCSPGVGSPSGTSPHTPHGPHRPSALAITT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00985363;
90% Identity: iTF_01021524; iTF_01151410;
80% Identity: -