Btha010819.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bhutanitis thaidina
Gene Symbol
-
Assembly
GCA_029286595.1
Location
JAGSMS010000018.1:9588861-9602950[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 8.6e-06 0.00056 20.4 0.9 1 23 203 225 203 225 0.98
2 30 0.00043 0.027 15.1 0.3 3 21 259 277 257 278 0.92
3 30 3e-05 0.0019 18.7 0.4 3 23 311 332 309 332 0.96
4 30 0.0042 0.27 12.0 0.6 1 23 383 406 383 406 0.96
5 30 0.01 0.65 10.8 0.1 1 23 423 445 423 445 0.96
6 30 8.2e-05 0.0053 17.3 2.3 2 23 486 507 485 507 0.97
7 30 0.00052 0.033 14.8 3.9 2 23 548 570 548 570 0.97
8 30 5e-05 0.0032 18.0 1.6 1 23 620 643 620 643 0.97
9 30 0.00098 0.063 13.9 0.1 1 23 701 723 701 723 0.97
10 30 0.022 1.4 9.7 5.5 3 23 736 756 734 756 0.96
11 30 0.079 5.1 7.9 0.4 2 23 768 789 767 789 0.96
12 30 0.0091 0.58 10.9 1.0 1 23 799 821 799 821 0.98
13 30 0.00049 0.031 14.9 6.7 1 23 850 872 850 872 0.97
14 30 0.00077 0.05 14.3 3.5 1 23 883 905 883 905 0.97
15 30 0.0012 0.074 13.7 1.0 1 23 913 935 913 935 0.96
16 30 0.0013 0.082 13.6 0.1 2 23 955 977 954 977 0.97
17 30 1.2 80 4.2 1.0 1 23 995 1017 995 1017 0.91
18 30 0.19 12 6.7 3.9 1 23 1024 1046 1024 1046 0.97
19 30 0.0028 0.18 12.5 4.7 2 23 1057 1079 1056 1079 0.95
20 30 0.0052 0.33 11.7 0.2 2 23 1102 1123 1101 1123 0.95
21 30 7.2 4.6e+02 1.8 0.3 2 20 1127 1145 1126 1146 0.86
22 30 7.7 5e+02 1.7 5.9 2 23 1166 1188 1165 1188 0.94
23 30 0.0076 0.49 11.1 0.2 3 23 1205 1225 1203 1225 0.94
24 30 0.072 4.7 8.1 4.9 3 23 1233 1253 1231 1253 0.96
25 30 0.013 0.86 10.4 0.8 2 23 1264 1286 1263 1286 0.95
26 30 6.8 4.4e+02 1.9 6.5 2 23 1303 1321 1303 1321 0.88
27 30 2.2 1.4e+02 3.4 1.1 2 21 1325 1344 1325 1345 0.93
28 30 0.21 13 6.6 0.4 2 23 1394 1415 1393 1415 0.93
29 30 0.00031 0.02 15.5 0.7 2 23 1426 1448 1425 1448 0.96
30 30 1.2 76 4.2 2.5 2 21 1486 1505 1485 1506 0.91

Sequence Information

Coding Sequence
ATGGCCCTCAAACTCGGGAAATGTAGGCTCTGCCTCAAACTCGGCGACTTTTACTCCATCTTCACGATGGATAATAATCTGCAGCTTGCAGAGATGGTGATGGAATGCGCACGAGTGAAGGTATACGAAGGGGATGGATTACCTGACAAGATATGCTCGGAGTGCATTCAGAAGCTCAGCAGCGCACACATATTCAAGCTTCAGTGCGAGAGGTCGGACCAGGAGCTGCGACGCAACTATGTGCCGCCGCCGGGTTTCAGCGAAACGCCGTCACCACCGAACAGGCAAAGCAGCGACTCCGCCTTCTCAAACCATACCGACATATCCAGCAACAACAAGCCTGCACCTGTAACGATTGAAAGCAAAGCAACTCCATTGAGTCGCAGCCGAAAACGAAGCCGGGAAAGCAACGATAACGCCTCATCCAGCAGCCAGTCCCACGACTTCCGTCCGAGTTCAACCAAGAGGGTCGAAGAGCTTCGAGCGTCGGAGAAAAGACCGAGAAAAGCCCTGAACACATCCTATTTAGACTCGGATTACGACGATAACAGTGGTTCCCATTTCTCAGGCGAAACTGACTCGGATGAGCCACTCATGAAGAGCGAATTTAAGTGTAAAATTTGCGGAAAACAATTCGCCTCAAAAACTAGTGTAAATGCACACACTAAAGTGCATTCGAGGAAGTCTTTAGCCAGGAACGCAGTGGTGGACATACCGAAGCCGGCAGTCAAAGAGTGCACGGAAGATGCTACAGATGTTGAAGACAAGCTCGCGTGTGAGAAATGCGACAAGacgtttaaattgaaaattatgttGAAACGTCATTTAGAGACCTGTGGCAAGTCTCCGCGGAAGTCACCGTTGAAGGAGTTACTAGTGTCGCTGGAGCCGATCGACGCAAGCTCGACCACGGAACCGAAAAAGTTGGACTGCGAAATGTGCACAACAAAGTTTAAGACAATCGAGAACTTGGAGAAGCATATGAGGGTTGTACACGCGGCTGTCCTGAATCGTCAGAGCTACCAGGCGAAGATGGTTAACGGCAAAGTGAGTGTCCCCTGTTACTATTGCGGGGCCCCATTCGACGACTACTACCTTCACAGCGCGCATTTCGAGTCATGTTCCAAGAAAGACGACTCTGTTACCTTTGCCTGCCCCATCTGCCAGAAAGTGATGAGCAGAAAGAACTCCTACTTCCTTCATATAAAAAATCTTCATTTCGAACCTCGATGCAGTCGGGGTGAAGAGAATACCAAGGAGTCGTTCTTTGAGTGTCGTATATGTAGTAAGAAGATGGCGACGCAGGATCAACTGATCACCCATCTAGCTGCCCACATGTCAAACATAGAAGAGAACGAAGATGGCGCGGATGAAGACTCTAGGGCGGCTCAAGCAGAAGACGACGCTTCGGTGTCATCGAGCTATACTAACTCGAATGTGCCAAGCGGTCCCTTGAAGTGCAAGATGTGCGATAAGCGATTTACATACAAGAAATGGCTGATTAGTCACGAACAGAAACATTTGACGGGTGAACTAGAAATAAAAACGGAGCCCCCCGACAAGCACACGTCCAGCAGTCTGCTCAGCGAGACCTATCACCAGTCGGAGTCGGAATCTAGTCAAGAGGAAGGGGATGACAATACGTGCGATATTTGCGAGAAGCAATTCTCATACAAACGCCTGTTGATTCACCACAAGCGTACCAAACACAACATGAGTTCGGGGACGAAGCGTGCGAAAATAAACCTTAAGGATTGCTCCGTGCGCTGTCTGATATGCGACATAGAGATGAAAGTCAGCGCGATCAATGAACACAACCAGAAGCACATATCGGTGAACATAAAGCCGAGGAATCTCTACACGTGCGCGGAGTGCGACCAGAAGTTTAAGAGTTGCAGCTCGCTGGCCACTCACATCAAATTGGTGCACAGACTGAAACAGCAGCAGGTGCAGGTGCCCAAGCTCGAGGGAGCCGATCTGGCGGATTTTTGTGAAGTCGTTGTGATGAAGGCGGAACCCCTGGCATTAGACCAGAGTCACAACGACTTTGGGACGGTTCCGTCGAAACAGGAGGGGGGCCCGCTGGTCAACTTGAGCGGGTTCACGTGCCCGATATGCGGTAAGCAGATGCCTACGTTGATATCGCTGAAGAGGCACGTGAACTGGCATTCGAACGTCGGTAACAACATTGAGAAGAAGTTGGATTGTTTTGTCTGCAAGGAGACATTTCGATTCCAATGCCACTACCGGCTGCACATGCGCGCGCACTACAACGACACCGGCCTGGACCCCGCGCTGCTCACGTGCGCCATCTGCAACCGCAAGAGTAAGAACCTGCGGGCCGCGCAGGCGCACATGAACTTCCACAAGCAAACGCGCTTCAAGAACAAGGACTATCAGTGCTCCATATGCAAGAGGATCTTCCAGTATAGAAAAGTCTACTTGTCGCACATGGCAATACATTATAAACGCGGTGAGAGCGTGAACAATACCGTCGTCGGCTACGTCTTGCCTAATACAGCAGATAAAACCGTATTCGATGGCAAATATACATGCCACCATTGCGGGAAAGTTTGCGACTCAGAAACCTCATTGAAACATCATATCATATGGCACAAATCTAAGACTTCTCTTTTCGGGGCACGCCACGAATGTCACATTTGCAATATTCAGTTTACCAACAAGCGGAGGTTAGAGCTTCACATCAGAGATCATTATGAGGATGATAATGGTCAGTACAAGTGCCCTATATGTGGCAAAGGCTTTATTGACGAGAATTATCATAGGAAACATGTAAAAGGACACAATTTCGATCACCAATCCCACAAGACAAGGATAGCGAAACTGAGGAAGGACAAAGTAAAGTGCCCCATTTGCGCCCGCTTCTATCCGGATTTAGTTAAACTCATTCGCCATTTACGACGTACGCATCCTGAGAGCAAGATGATCAAGCCCGATCCGGATGCACCTGCCCAGAGCTACTTCTCGTGCAAGCTATGCGCCAAAGTCTTCCTAGACGAACGAAGGTTGCAACATCACGAGGAGGCTCATTTAAGGAAGCCGGAGTTCTTCAAATGCAAATTTTGTGGCAAGAAGACCATCTCCTTGAAAAATCATAGGCTCCACATAAAAGCACACTTAACACAGAAATATTTTGATGAGCCACTAAAATGCATGCATTGTGACGAAACCTTCACAAGAGGTTATGATTTGCATCATCATCTACGTGATGTCCATGATATTAATGAGACATGGATTGCAGAACGCACGGAGAAGGCGTTGAATGGGCCATTGAAAGAATTACAGTGCTCCATCTGCCTGAAGATACTGGCAAGTAAAGGAAACTTTGAACGCCATATCGACTACCACAATTCCCTAAGATGCAACTACTGCTTCGACTTCTTTAGCTCATTGAGATTCTTGGAGGGGCATCTTGCATTCAGCTGTGAGAAGAAAAAGTTGATTGGAGACACTGAGGTGTACCCTAAAAAGGTAAAATGTCATATATGTTATAAGGCTTTCCATCTGCAAGTGAAGTTGGACTGTCATTTGCGCACGCAGCATGATATTAAAGTTTGTAAAGAGGCATCTGAAGGCAAGAAGGAGATCATCTGTGATTATTGCTTCCGTGTATTTGAGAATGAGTATGCCTTGAGCACGCACAAGATATACCACCGCACGATCGGATATTACGGATGTTTGTATTGCAACAAAAAGTTCAACACTATAACGCTGTTCAAAAAACATAAGAACCACCACTTTTCGCAACTGAATGTTGATAATCCTACAAAATGCGAGCATTGTGACGAGACGTTTGTCGCATTTAGAGAAATGATTTACCATATGCGGGATGTTCACGGCGATGAAAAAGAGTGGATTGTTATGCCCAAGGAATCAATAGAGGAGAAGTGCcatatttgcaataaaattttcttcaatcTCCATAAACATCTGACATATCATGAGGAAAACAGATGCAAAAAGTGCGCGGAATATTTCTACTCACAAGTGGATTTCGACAATCATCTATGTGCCATAGAAAGTGATGAGGAAGTGGACGAGAACAATGAGAACGATTTGCGACCTAAATATGAAGAGTGCTCGTTTTGCTTCAAGCCGACAACAAAGAAGAACTCACAAAAGAAACATGATCACATACATAGAATATCTGGCTCGATTTCTTGTCGATTTTGCCCtctcaaatttaaaactattgatGCGTTTAATATTCACGCATTCTCCCATCGAAGCAGAAAGTACAATAAGAAGCCAATAAAGTGTCGAAAGTGCGGCGAGAAGTTTGTGCGCTACGGTCCCTTCATGAGACACATGAAGTCCGTGCATAAATCCACTCAGAAATTGCATTATCGGACCATGGTCAAGCCAGAGCCGTGCGCTGTTTGTGGAGATGAGTTTCCAAATCTTCACAATCACTATCGAGCTCATTTGCAAAACCAGTGTCAgttatgtaacaaatattttacgtcatataaagttttttcattGCATCAATGTGAAAAGGAAGACTCTGAACCATCGAAAGTGTTCACATGTGAAGAAGACCTCATAAGATTAATTAATTCCTATACCCCTAAGGATGAGAAGGATGATGAGAAGTTTTATGGTCACAGTgatgaagaggaggaagaggaggagcaAATGGTAGAAGGGGGAAATGATCTTCGTGACAATGAAGGTACAATGCAGGATGAAGAGAGTCAGAACTCATCAGATGCAAATTTGCACATGATGGTCCATACACCAATAATATCTGATGTGCTGTCACTTTACGAGAATAAGGATGACAAACATCCTAACCTAGATGATGACATTGTGAATATAACTGATGATGAGTCATTGGATGGTGAAGAGGTTGTCACAGTTATAACAATTGATGATTGA
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTMDNNLQLAEMVMECARVKVYEGDGLPDKICSECIQKLSSAHIFKLQCERSDQELRRNYVPPPGFSETPSPPNRQSSDSAFSNHTDISSNNKPAPVTIESKATPLSRSRKRSRESNDNASSSSQSHDFRPSSTKRVEELRASEKRPRKALNTSYLDSDYDDNSGSHFSGETDSDEPLMKSEFKCKICGKQFASKTSVNAHTKVHSRKSLARNAVVDIPKPAVKECTEDATDVEDKLACEKCDKTFKLKIMLKRHLETCGKSPRKSPLKELLVSLEPIDASSTTEPKKLDCEMCTTKFKTIENLEKHMRVVHAAVLNRQSYQAKMVNGKVSVPCYYCGAPFDDYYLHSAHFESCSKKDDSVTFACPICQKVMSRKNSYFLHIKNLHFEPRCSRGEENTKESFFECRICSKKMATQDQLITHLAAHMSNIEENEDGADEDSRAAQAEDDASVSSSYTNSNVPSGPLKCKMCDKRFTYKKWLISHEQKHLTGELEIKTEPPDKHTSSSLLSETYHQSESESSQEEGDDNTCDICEKQFSYKRLLIHHKRTKHNMSSGTKRAKINLKDCSVRCLICDIEMKVSAINEHNQKHISVNIKPRNLYTCAECDQKFKSCSSLATHIKLVHRLKQQQVQVPKLEGADLADFCEVVVMKAEPLALDQSHNDFGTVPSKQEGGPLVNLSGFTCPICGKQMPTLISLKRHVNWHSNVGNNIEKKLDCFVCKETFRFQCHYRLHMRAHYNDTGLDPALLTCAICNRKSKNLRAAQAHMNFHKQTRFKNKDYQCSICKRIFQYRKVYLSHMAIHYKRGESVNNTVVGYVLPNTADKTVFDGKYTCHHCGKVCDSETSLKHHIIWHKSKTSLFGARHECHICNIQFTNKRRLELHIRDHYEDDNGQYKCPICGKGFIDENYHRKHVKGHNFDHQSHKTRIAKLRKDKVKCPICARFYPDLVKLIRHLRRTHPESKMIKPDPDAPAQSYFSCKLCAKVFLDERRLQHHEEAHLRKPEFFKCKFCGKKTISLKNHRLHIKAHLTQKYFDEPLKCMHCDETFTRGYDLHHHLRDVHDINETWIAERTEKALNGPLKELQCSICLKILASKGNFERHIDYHNSLRCNYCFDFFSSLRFLEGHLAFSCEKKKLIGDTEVYPKKVKCHICYKAFHLQVKLDCHLRTQHDIKVCKEASEGKKEIICDYCFRVFENEYALSTHKIYHRTIGYYGCLYCNKKFNTITLFKKHKNHHFSQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDEKEWIVMPKESIEEKCHICNKIFFNLHKHLTYHEENRCKKCAEYFYSQVDFDNHLCAIESDEEVDENNENDLRPKYEECSFCFKPTTKKNSQKKHDHIHRISGSISCRFCPLKFKTIDAFNIHAFSHRSRKYNKKPIKCRKCGEKFVRYGPFMRHMKSVHKSTQKLHYRTMVKPEPCAVCGDEFPNLHNHYRAHLQNQCQLCNKYFTSYKVFSLHQCEKEDSEPSKVFTCEEDLIRLINSYTPKDEKDDEKFYGHSDEEEEEEEQMVEGGNDLRDNEGTMQDEESQNSSDANLHMMVHTPIISDVLSLYENKDDKHPNLDDDIVNITDDESLDGEEVVTVITIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00923027;
90% Identity
-
80% Identity
-