Basic Information

Insect: Beris morrisii
Gene Symbol: RREB1
Assembly: GCA_951812415.1
Location: OX638310.1:119781127-119786312[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0055 0.66 11.5 0.6 1 21 183 203 183 205 0.96

2 14 0.00031 0.038 15.4 0.2 1 23 215 237 215 237 0.98

3 14 2.2e-05 0.0027 19.0 7.5 1 23 243 265 243 265 0.98

4 14 0.069 8.4 8.0 3.1 2 21 397 416 397 417 0.94

5 14 2.3 2.8e+02 3.2 0.5 1 11 460 470 460 480 0.77

6 14 0.0078 0.95 11.0 0.1 1 23 617 639 617 639 0.97

7 14 3e-05 0.0036 18.6 0.9 1 23 648 670 648 670 0.99

8 14 0.00078 0.094 14.1 2.0 1 23 676 699 676 699 0.97

9 14 0.0045 0.54 11.7 2.2 1 23 1006 1029 1006 1029 0.96

10 14 0.00051 0.062 14.7 1.9 2 23 1317 1338 1316 1338 0.97

11 14 0.14 16 7.1 6.3 1 23 1344 1367 1344 1367 0.97

12 14 0.044 5.4 8.6 2.1 1 23 1428 1451 1428 1451 0.97

13 14 0.59 72 5.1 2.8 2 23 1497 1518 1496 1518 0.91

14 14 0.0013 0.15 13.5 4.8 1 23 1524 1546 1524 1546 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0055	0.66	11.5	0.6	1	21	183	203	183	205	0.96
2	14	0.00031	0.038	15.4	0.2	1	23	215	237	215	237	0.98
3	14	2.2e-05	0.0027	19.0	7.5	1	23	243	265	243	265	0.98
4	14	0.069	8.4	8.0	3.1	2	21	397	416	397	417	0.94
5	14	2.3	2.8e+02	3.2	0.5	1	11	460	470	460	480	0.77
6	14	0.0078	0.95	11.0	0.1	1	23	617	639	617	639	0.97
7	14	3e-05	0.0036	18.6	0.9	1	23	648	670	648	670	0.99
8	14	0.00078	0.094	14.1	2.0	1	23	676	699	676	699	0.97
9	14	0.0045	0.54	11.7	2.2	1	23	1006	1029	1006	1029	0.96
10	14	0.00051	0.062	14.7	1.9	2	23	1317	1338	1316	1338	0.97
11	14	0.14	16	7.1	6.3	1	23	1344	1367	1344	1367	0.97
12	14	0.044	5.4	8.6	2.1	1	23	1428	1451	1428	1451	0.97
13	14	0.59	72	5.1	2.8	2	23	1497	1518	1496	1518	0.91
14	14	0.0013	0.15	13.5	4.8	1	23	1524	1546	1524	1546	0.99

Sequence Information

Coding Sequence: ATGATTAAAATGAATCAGCCACAACCGTCGCAACCGTCAAAGATGGAACAACAGCGACGACTTTCAACCACATCCGAATCATCGGTTGAAGTAATGGATCTGGGCCGTACACCGAATCAAACGACCAATAGCGAAGCAATTAATATCACATCGAGTACAGCGAATTCCGTTAACAACGATTCGGATAACTATGAATCCGATCCCGAAGACTATTCAATTCggaaaaatccacaaaattcaCATCATCTTCAAACCGAACAgcgaacaatattaaaaaatggtaTCGCTTCGGATCACTTCAGCAGCGGTCAAATTCGAAAGAAGTTCCGAAGCAGCACACCAAATCGTAATAATAATAGTAGCATTCATAATAACAATAACACGAGCCTAACATCGGCGAGCGCTGTACCAACGGCAACAAGCCTGCAATTTTTGAATTCGAATACTACAGATCGAACAGCAAATGAGTCCGGTTTCATGGACGCGAGCAGCCATCACTTGAACTCTAGTCCAGAATCTGATATTGGCGAGCGAGATGATGTGAAGTATGTTTGCCCAATATGCGAAGTCGTATCGGCTACACCACACGAATTCACCAATCACATTCGATGCCATAATTACTCATCCGGTAGTACGGAGAATTTTACCTGTCGGATATGCTCAAAGGTTTTGTCGTCAGCTTCATCGCTGGATCGCCATGTTCTTGTACACACCGGCGAACGGCCATTCAATTGCAAATATTGCCATCTAACATTCACAACGAACGGCAACATGCATCGACATATGCGCACCCATAAACAACATCCCCAACAACGAAACAACACTAGCTTAGGGAGTGGAGGTGGCAGCAGTGGCCCTGGTAGCGGAGGTAGTGGTAACGGCGATGGTGAAAGCTACGAAAGCGATGGTTGCTCAACAGATTCCAGTGCCAGTAGTGCAAACAATAACAACcataataataacaacaacaataacaataattataaacGCAAGAGTACCGACGATGATAGCGGAATAATAAAAAGACGCATGAAGACTATCAATAATAATATCATAAACGAAACCGAATCGGAACACAATGTCGTCGCTATGCAGAAATACTGTTGTCCAGTGTGCAGTCGCAACGATTTCATTAACATGCTCTCATTGGGTACGCATATGGACCGAGAACATCCCGGAATTCCAGCCAAGTGTCGGCAATGCGAGATCGTCTTCAAAAGTCACAAGTCTCTGAACGCTCATCGATGTCTGAACAAAGTGAACATAACGCAAGGCTTCAAAGACATCACATTCGTTGACTTCTCGAGCGAAAAGTTTCCCTTGATTGCCCGATCGCTTTGCGAACAATCGATTCGTACTCCAATCACCAGCCAAAAATTCGAATGTCCGAAATGTTATCGGGCCTTTCCATGTGCCAGTGCCGCTGAAATTCATACCAAAGATTGCGGAGACTCGCCGCAAGACTACTCAATCCGAAAGCGAGTATCGAGCGAAAGTTCCGAAGAAGAAAACCGTCGAGATGAATTTTTTGCTCATTTAGATTTACGAAACAAGTCTGCCATGAGTTTGGCCAGTACAATGTCATCTCCGCGAACATCCGAGAAATCTGATATCAACAAAACCGATCTTGAGAAAACGCCACGTTCTTCGCATTATCATTACAACGAATCGAAAGATTTGGCCGATATTCAGTCAATTTTAAACGTAACATCGTCATCGAACAGTTTTCTACGGAATTTCGAAAACGTTGTTAATACGCCGAGTAGCGATTACGGTCTTGGCAAGGACGAAGAAGAAGCTCAAGATGCCTTCACTTCAGAGTTTCGAAAAATGAAATTACGCGGTGAGTTTCCGTGTAAACTGTGTACGGCAGTATTTCCCAACCTGCGCGCTTTGAAAGGTCACAATCGAGTGCATTTGAGCGCAGCCGGCGCTGGTCCATACCGATGTAATATGTGTCCATATTCTATTCACGATAAAGCCGCTCTGATACGACATATGCGCACCCACAACGGCGACCGTCCATACGAATGTGCCGTTTGTAATTACGCATTCACAACAAAAGCCAACTGTGAACGACATCTAAGAAATCGACATGCAAAAACAACACGCGACGAAGTCAAACGTGCTATAATTTATCATCCGTCTGAAGATTCGAGCTGTGAAGATCCGATCAAGAAGCTTCAAATGTTCTCCTCGCCGGAATTTGACGACGACGAACCCAGTCTACCCAAGGACAGATCAACGCCGGTCTCGCATCTGAAGGAAATTCTTCAATCTGATAGCAGTCCAGTCAAGATACAAGTAAAGAGTTTGGAAAAACTAATGGACAACTCGTTGTCATCAATTAAGGACGAAGAAAAAGAGCCTTTAGGCGAATCGCTGTCCGTGCCTGAAACTGCACGACCCATAGATCTCAGCATGGACGTTTTGGATTTAAGCAAAAAGGCTAAATTACCGGAAGTTGAAGTTGAGAAAGTTGAGATTAAACCAGAAATACTGGCAAACGAAAAGAATCACCCATGGCTTCTTGCTCAACAGCAGCTCTTCAATGAGACTATACCTAAAATTGATCCTGCGCACTATCTACAGTTATCTCAACTTTATCGCAACTTCATGTTCCCATCGATTCAACCGTTTCTCTTCCCCAATTCATTTATACCAAATAATTTTAGCGACATGAATAAGTTTCCGCCCATGCTATTAAATCCGATGTTTCCAGCTCCGCCAGATGGCCAGAACCCATCATCGATTCCTGTCGGCTCCAACATCTCACCGGCACCGCTTATTAAACcaattgaaaatcaaaattcaaatgcATCGCCTACTCAACTGCATCCTTCAGTTTCGCCGCAGTTGAATATTCCGCGTCATACGCTTGGTGGAGGTGGTGGTCAACCACCAACAGTTGGCATTATGCCACAGATACAAAATACCGGTCCGGTTAAGATGGTAATCAAGAACGGAGTTCTTATGCCAAAACAAAAGCAGCGTCGCTACAGAACTGAACGACCCTTCACATGTGAGCATTGTGCAGCCCGTTTTACGCTCCGCTCAAATATGGAACGGCACGTAAAGCAACAACATCCGCAATACTGGGCACAGCGGCAACGAAGTGGACATCACATTATGCGTCGCGGCGGATCAGTAATGCCGCAAGTCAGTTCTACATCCATCTCGTCGCCTAATTCTGCCATGACATCGAATCATTTCAATGCAATTTCCGATCAAGTTAAGTACGCCATCTTGGCACAACAGTTGAAGGCCCGAAAGGATACAGATATACTTCAGCAGGCTTTGGCTCAAAATAAAGGTCCAATCAACAATCACTTGAATCTAGCGAATAATAACGTTCCACATAGTTCGACTGCATCAAACAGTTTTGAAGATGACGACCCGAAGCTTGTTATTGATGAAGAGAATGATCTTGACGAGGATGAAGAGGATGACGAGATGTACGACGAAACGAAACCCGAAGATCTCTCAAGCTCAACGAATTGTGCAGCCAAGAAGGTTGCCGAAACTATTCTCGAGCAAGCCATGAAAGCGTCGTCTTCGAAGCCAGCGCCGATTGCAGCGGTGCAACCGGAGGATGCAAAAGAACCTAACGATTTCTGCCTAAAAGTTGCTAACAATATGCTGGCTCGGGCTGAATCCGTTGGCAAGTACCTTAAGAAGGTAGCAAGCTCATCGTTTAAGGACGAATCGCCTGATTTAGTTTCTGTCTCAAAACTTGTGGACAATGCTACCAATCCATTGTCTTCGTTCAATAGCTACTTTCGTCCAAGTGACTTAGCAAATCAAATGGAGCAGAGCGACGAAGAAGGACTTGTAGCTTCGGGTAGTGCTTCAGAAAGCAACAATTCCGGAAATGAAGAACCGCAAAGCAGCACCGGTGGTCGCGACGAGAAAAGAAAATCGGCATATAGTTTGGCACCAAATCGGGTTTCCTGTCATTACTGCCAGAGGACATTCCCGTGGACCAGTTCCCTACGGCGTCATATCTTAACGCATACAGGCCAAAAGCCTTTCAAGTGCTCTCACTGTCCGCTCCTATTCACAACAAAGAGCAACTGTGATCGTCATTTGCTGCGGAAGCACGGTAACGTCGAGTCCGCCGTATCGCTCTATGTTCCTATCGAAGACATTCCCGATCCGGTTCCTATGCCGAAAGTTGAAGAGCAGCTAATCGAAACATGCAAACTACCGTCAGTCAGCAACATGAATCTGAGCATTCCAAATGTGAAACCCGAATCGCTAATAGCCGCTTCCGATCTTCCGTTCAAATGTCATCTGTGCGATAGTTCGTTTGCCGAGCGCAGTCAAAGTTTGGATCACATCAAAACGAATCATTCGCAAGAATTTGCATTGCTCCTAGCCAAAGGTGCACTCGATGCCGATGCCGATTACAATCATATGCATTCGGCCGAAGATGACGAGCGTGTCGATGGTCGTGGCAAGTATCCCGACTATGCCAATCGTAAAGTTAAATGTGCGTTTTGTATGCATCGTTTCTGGTCGACAGAAGATCTTCGACGCCATATGCGACGTCATTCGGGCGAGCGACCCTTTCAATGTGAAATCTGCTTGCGTAAATTCACTCTAAAGCACAGCATGCTGCGGCATATGAAGAAGCATAGTAACGGCCATCATAATCTCCAACCGAATACATTGAATAGCGGCTCGGATATGTCCGACGACGAACAGCCAACCAGTCTAATGCATCCGAATCCGTTGATAAGTCATAAGATTCAGGACATGATTAGTCGAGCGGAAGCGTGGCGCAATAGTAACTTGAGCGGCGAACAAAAGGAGAATATCGCGCAACATTCGCGACTACGACTCGATAAGGACGGTAGCGGTACAGTGGCTACTGGCGGTGAAGATAATTCCGATTTGATTAGCGATCTCTTGGGTATTAGCGGTCAGGGAATTCTAAATAAGCTTCTGTCGTCTGCCGATGAAGCGGCCAAACTACTTGGCGtcgataaataa
Protein Sequence: MIKMNQPQPSQPSKMEQQRRLSTTSESSVEVMDLGRTPNQTTNSEAINITSSTANSVNNDSDNYESDPEDYSIRKNPQNSHHLQTEQRTILKNGIASDHFSSGQIRKKFRSSTPNRNNNSSIHNNNNTSLTSASAVPTATSLQFLNSNTTDRTANESGFMDASSHHLNSSPESDIGERDDVKYVCPICEVVSATPHEFTNHIRCHNYSSGSTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHPQQRNNTSLGSGGGSSGPGSGGSGNGDGESYESDGCSTDSSASSANNNNHNNNNNNNNNYKRKSTDDDSGIIKRRMKTINNNIINETESEHNVVAMQKYCCPVCSRNDFINMLSLGTHMDREHPGIPAKCRQCEIVFKSHKSLNAHRCLNKVNITQGFKDITFVDFSSEKFPLIARSLCEQSIRTPITSQKFECPKCYRAFPCASAAEIHTKDCGDSPQDYSIRKRVSSESSEEENRRDEFFAHLDLRNKSAMSLASTMSSPRTSEKSDINKTDLEKTPRSSHYHYNESKDLADIQSILNVTSSSNSFLRNFENVVNTPSSDYGLGKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLSAAGAGPYRCNMCPYSIHDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSSCEDPIKKLQMFSSPEFDDDEPSLPKDRSTPVSHLKEILQSDSSPVKIQVKSLEKLMDNSLSSIKDEEKEPLGESLSVPETARPIDLSMDVLDLSKKAKLPEVEVEKVEIKPEILANEKNHPWLLAQQQLFNETIPKIDPAHYLQLSQLYRNFMFPSIQPFLFPNSFIPNNFSDMNKFPPMLLNPMFPAPPDGQNPSSIPVGSNISPAPLIKPIENQNSNASPTQLHPSVSPQLNIPRHTLGGGGGQPPTVGIMPQIQNTGPVKMVIKNGVLMPKQKQRRYRTERPFTCEHCAARFTLRSNMERHVKQQHPQYWAQRQRSGHHIMRRGGSVMPQVSSTSISSPNSAMTSNHFNAISDQVKYAILAQQLKARKDTDILQQALAQNKGPINNHLNLANNNVPHSSTASNSFEDDDPKLVIDEENDLDEDEEDDEMYDETKPEDLSSSTNCAAKKVAETILEQAMKASSSKPAPIAAVQPEDAKEPNDFCLKVANNMLARAESVGKYLKKVASSSFKDESPDLVSVSKLVDNATNPLSSFNSYFRPSDLANQMEQSDEEGLVASGSASESNNSGNEEPQSSTGGRDEKRKSAYSLAPNRVSCHYCQRTFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDIPDPVPMPKVEEQLIETCKLPSVSNMNLSIPNVKPESLIAASDLPFKCHLCDSSFAERSQSLDHIKTNHSQEFALLLAKGALDADADYNHMHSAEDDERVDGRGKYPDYANRKVKCAFCMHRFWSTEDLRRHMRRHSGERPFQCEICLRKFTLKHSMLRHMKKHSNGHHNLQPNTLNSGSDMSDDEQPTSLMHPNPLISHKIQDMISRAEAWRNSNLSGEQKENIAQHSRLRLDKDGSGTVATGGEDNSDLISDLLGISGQGILNKLLSSADEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00202986; iTF_00324788;
90% Identity: iTF_00202986;
80% Identity: -