Basic Information

Insect: Beris chalybata
Gene Symbol: RREB1
Assembly: GCA_949128065.1
Location: OX421896.1:86460856-86466009[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0062 0.82 11.5 0.6 1 21 180 200 180 202 0.96

2 14 0.00035 0.047 15.4 0.2 1 23 212 234 212 234 0.98

3 14 2.5e-05 0.0033 19.0 7.5 1 23 240 262 240 262 0.98

4 14 0.078 10 8.0 3.1 2 21 392 411 392 412 0.94

5 14 0.95 1.3e+02 4.6 0.4 1 20 455 474 455 476 0.85

6 14 0.0088 1.2 11.0 0.1 1 23 612 634 612 634 0.97

7 14 3.4e-05 0.0045 18.6 0.9 1 23 643 665 643 665 0.99

8 14 0.00088 0.12 14.1 2.0 1 23 671 694 671 694 0.97

9 14 0.005 0.67 11.7 2.2 1 23 1002 1025 1002 1025 0.96

10 14 0.00057 0.077 14.7 1.9 2 23 1312 1333 1311 1333 0.97

11 14 0.15 20 7.1 6.3 1 23 1339 1362 1339 1362 0.97

12 14 0.05 6.7 8.6 2.1 1 23 1423 1446 1423 1446 0.97

13 14 0.67 89 5.1 2.8 2 23 1492 1513 1491 1513 0.91

14 14 0.0014 0.19 13.5 4.8 1 23 1519 1541 1519 1541 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0062	0.82	11.5	0.6	1	21	180	200	180	202	0.96
2	14	0.00035	0.047	15.4	0.2	1	23	212	234	212	234	0.98
3	14	2.5e-05	0.0033	19.0	7.5	1	23	240	262	240	262	0.98
4	14	0.078	10	8.0	3.1	2	21	392	411	392	412	0.94
5	14	0.95	1.3e+02	4.6	0.4	1	20	455	474	455	476	0.85
6	14	0.0088	1.2	11.0	0.1	1	23	612	634	612	634	0.97
7	14	3.4e-05	0.0045	18.6	0.9	1	23	643	665	643	665	0.99
8	14	0.00088	0.12	14.1	2.0	1	23	671	694	671	694	0.97
9	14	0.005	0.67	11.7	2.2	1	23	1002	1025	1002	1025	0.96
10	14	0.00057	0.077	14.7	1.9	2	23	1312	1333	1311	1333	0.97
11	14	0.15	20	7.1	6.3	1	23	1339	1362	1339	1362	0.97
12	14	0.05	6.7	8.6	2.1	1	23	1423	1446	1423	1446	0.97
13	14	0.67	89	5.1	2.8	2	23	1492	1513	1491	1513	0.91
14	14	0.0014	0.19	13.5	4.8	1	23	1519	1541	1519	1541	0.99

Sequence Information

Coding Sequence: ATGATTAAAATGAATCAGTCGCAACCGTCAAAGATGGAACAGCAGCGACGACTTTCAACCACATCCGAATCATCGGCTGAAGCAATGGATCTGGGCCGTACACCGAATCAAACGACCAATAGCGAAGCAATTAATATCACATCGAGTACAGCGAATTCCGTTAACAACGATTCGGATAACTACGAATCCGATCCCGAAGACTATTCGATTCGGAAAAATCCACAAAATTCACATCATCATCAAACCGAACAgcgaacaatattaaaaaatggtatCGCTTCGGATCACGTAAGCAGCGGTCAAATTCGAAAGAAGTTTCGAAGCAGCACACCAAATCGTAATAATAATAGTAGCATCCATAATAACAATAACACGAGCCTAACATCGGCAAGCGCTGTACCAACGACAACGAGTCTGCAATTTTTGAATTCGACTACTACAGATCGAACAGCCAATGAGTCCGGTTTCATGGACGCGAGCAGCCATCACTTGAACTCTAGTCCAGAATCTGATGTTGGCGAGCGAGATGATGTCAAGTATGTTTGTCCAATATGCGAAGTCGTATCGGCTACTCCACACGAATTCACCAATCACATTCGATGCCATAATTACTCATCCGGTAGTACGGAGAATTTTACCTGTCGGATCTGCTCAAAgGTTTTATCGTCAGCTTCATCGCTGGATCGTCATGTTCTTGTACATACCGGCGAACGGCCATTCAATTGCAAATATTGCCATCTAACATTCACAACGAACGGCAACATGCATCGACATATGCGCACCCATAAGCAACATCCCCAACAACGTAACAACACTAGCTTAGGGAGTGGAGGTGGCAGCAGTGGCCCTGGTAGCGGAGGTAGTGGTAACGGCGATGGTGAAAGCTACGAAAGCGATGGTTGCTCAACAGATTCCAGTGCCAGTAGTGCAAACAATAACAAccataacaacaacaataacaataattataaacGCAAGAGTACCGACGATGATAGCGGAATAATAAAAAGACGCATGAAGACtatcaataataatattataaacgAAACCGAATCGGAACACAGTGTCGTCGCTATGCAGAAATACTGTTGTCCAGTGTGCAGTCGAAACGATTTCATTAACATGCTCTCATTGGGTACGCATATGGACCGAGAACATCCCGGCATTCCAGCCAAGTGTCGGCAATGCGAGATCGTCTTCAAAAGTCACAAGTCTCTGAACGCTCATCGATGTCTGAACAAAGTGAACATAACGCAAGGCTTCAAAGACATCACATTCGTTGACTTCTCGAGCGAAAAGTTTCCCTTGATTGCCCGATCGCTTTGCGAACAATCGATTCGTACTCCAATCACCAGCCAAAAATTCGAATGTCCGAAATGTTATCGGGCGTTTCCATGTGCCAGTGCCGTTGAAAGTCATACCAAAGATTGCGGAGATTCGCCGCAAGACTACTCAATCCGAAAGCGAGTATCGAGCGAAAGTTCGGAGGAAGAAAATCGTCGAGATGAATTTTTTGCTCATTTAGATTTACGAAACAAGTCTGCCATGAGTTTGGCCAGTACGATGTCATCTCCGCGAACATCCGAGAAATCTGATATCAATAAAACCGATCTTGAGAAAACGCCACGTTCTTCGCATTATCATTACAACGAATCAAAAGATTTGGCCGATATTCAGTCAATTTTAAACGTTACATCGTCATCGAACAGTTTTCTACGGAATTTCGAAAACGTTGTTAATACGCCGAGTAGCGATTACGGTCTTGGCAAGGACGAAGAAGAAGCTCAAGATGCCTTCACTTCGGAGtttcgaaaaatgaaattaCGCGGTGAGTTTCCGTGTAAACTGTGTACGGCAGTATTTCCCAACCTGCGCGCTTTGAAAGGTCACAATCGAGTTCATTTGAGCGCAGCCGGCGCTGGTCCATATCGATGTAATATGTGTCCATATTCTATTCACGATAAAGCCGCTTTGATACGACATATGCGCACCCACAACGGCGACCGTCCATACGAATGTGCCGTTTGTAATTATGCATTCACAACAAAAGCCAACTGTGAACGACATCTAAGAAATCGACATGCAAAAACAACACGCGACGAAGTCAAACGTGCTATAATTTATCATCCGTCTGAAGATTCAAGCTGCGAAGATCCGATCAAGAAGCTTCAAATGTTCTCCTCGCCGGAATTTGACGACGACGAACCCAGTCTACCCAAGGACAGATCAACGCCGGTCTCGCATCTGAAGGAAATTCTTCAATCTGATAGCAGTCCAGTCAAGATACAAGTAAAGAGTTTGGAAAAATTAATGGACAACTCGACGTCATCGATTAAGGAAGAAGAAAAGGAGCCTGTAGACGAATCGTTGTCCGTGCCTGAAACTACACGGCCAATAGATCTCAGCATGGATGTTTTGGATTTAAGCAAGAAAGCTAAATTACCGGAAGTTGAAGTTGAGAAAGTTGATATAAAACCAGAAGTACTGGCAAACGAAAAGAATCATCCATGGCTTCTTGCTCAACAGCAGCTCTTCAATGAGACTATACCTAAAATTGATCCCGCGCACTATCTACAGTTATCTCAACTTTATCGCAACTTCATGTTCCCGTCGATTCAACCGTTCCTCTTCCCCAATTCATTTATACCAAATAATTTTAGCGAGATGAATAAGTTTCCGCCCATGCTATTGAATCCGATGTTTCCAGCTCCGCCAGATGGCCAGAGTCCATCGTCGATTCCCGTCGGCTCCAACATTTCACCGGCACCGCTGATTAAACCAATTGAAAATCAAAGTTCAACTGCATCGCCTACTCAACTGCATCCATCAGTTTCGCCACAGTTGAATATTCCGCGTCATACGCTTGGTGGAGGTGGGTGTCAACCTCCAACAACAGTTGGTATTATGCCACATATACAAAATACCGGTCCGGTTAAGATGGTAATCAAGAACGGAGTTCTTATGCCAAAACAAAAGCAGCGTCGCTACAGAACTGAACGACCCTTCACATGCGAGCATTGTGCAGCCCGTTTTACGCTTCGCTCAAACATGGAACGGCACGTCAAGCAACAGCATCCGCAATACTGGGCACAGCGGCAACGAAGTGGACATCACATTATGCGTCGCGGCGGATCAGTAATGCCGCAAGTCAGCTCTACGTCCATCTCGTCGCCTAACTCTGCCATGACATCGAATCATTTCAATGCAATTTCCGATCAAGTTAAGTATGCCATCTTGGCACAACAGTTGAAGGCCCGAAAGGATACAGATATTCTCCAGCAGGCTCTGGCTCAAAATAAAGGTCCAAGCAACAATCACTTGAATCTAGCGAATAATAACGTTCCACATAGTTCGACTGCATCAAACAGTTTTGAAGATGACGATCCGAAGCTTGTTATTGATGAAGAGAACGATCTTGACGAGGATGAAGAAGATGACGAGTTGTACGACGAAACGAAACCCGAAGATCTCTCAAGCTCAACGAATTGTGCAGCGAAGAAAGTTGCCGAAACTATTCTCGAGCAAGCCATGAAAGCGTCGTCTTCGAAACCAGCACCGATTGCAGCGGTGCAACCGGAGGATGCAAAAGAACCTAACGATTTCTGCCTAAAAGTTGCTAACAATATGCTGGCTCGGGCTGAATCCGTTGGCAAGTACCTCAAGAAGGTAGCAAGCTCATCGTTTAAGGACGAATCGCCTGATTTAGTTTCTGTCTCGAAGCTTGTGGACAATGCGACCAACCCATTGTCTTCGTTCAATAGCTATTTTCGTCCAAGTGACTTGGCAAATCAAATGGAGCAGAGCGACGAGGAAGGACTTGTAGCTTCGGGTAGTGCTTCAGAAAGCAACAATTCCGGAAATGAAGAACCACAAAGCACCGGTGGTCGCGACGAGAAAAGAAAATCGGCATACAGTTTGGCACCAAATCGGGTTTCGTGTCATTACTGCCAGAGAACATTCCCGTGGACCAGTTCCCTACGGCGTCATATCTTAACGCATACCGGCCAAAAGCCTTTCAAGTGCTCTCACTGTCCGCTCCTATTCACAACGAAGAGCAACTGTGATCGTCATTTGCTCCGGAAGCACGGTAACGTTGAGTCCGCCGTTTCGCTCTATGTTCCTATCGAAGACATTCCCGATCCAATTCCTATGCCGAAAGTTGAAGAGCAGCCAATCGAAACATGCAAACTACCATCCGTCCCCAGCATGAATCTTAGCATTCCAAATGTGAAGCCCGAATCGCTAATAGCCGCTTCCGATCTTCCGTTCAAATGCCATCTGTGCGATAGTTCGTTTGCCGAGCGCAGTCAAAGTCTGGATCACATCAAAACGAATCATTCGCAAGAGTTTGCATTGCTCCTGGCCAAAGGTGCACTCGATGCCGATGCCGATTACAATCATATGCATTCGGCTGAAGATGACGAGCGTGTCGATGGTCGCGGCAAGTATCCCGACTATGCCAATCGTAAAGTTAAATGTGCGTTTTGTATGCATCGTTTCTGGTCGACAGAAGATCTTCGCCGTCATATGCGTCGTCATTCGGGCGAACGACCATTTCAATGTGAAATCTGTTTGCGTAAATTCACGCTAAAGCACAGCATGCTACGGCATATGAAGAAGCATAGTAACGGCCATCATAATCTCCAACCGAATACATTGAATAGTGGATCGGATATGTCCGACGACGAACAGCCGACCAGTCTAATGCATCCGAATCCGTTGATTAGTCATAAAATTCAGGATATGATTAGTCGAGCGGAAGCTTGGCGCAATAGTAACTTGAGCGGCGAACAAAAGGAGAATATCGCGCAACATTCACGACTACGACTCGATAAGGACGGTAGCGGTACAGTGGTTACTGGCGGTGAAGATAATTCCGATTTGATTAGCGATCTCTTGGGTATTAGCGGTCAGGGAATTCTAAATAAGCTTCTGTCGTCTGCCGATGAAGCGGCCAAACTACTTGGCGTCGATAAGTAa
Protein Sequence: MIKMNQSQPSKMEQQRRLSTTSESSAEAMDLGRTPNQTTNSEAINITSSTANSVNNDSDNYESDPEDYSIRKNPQNSHHHQTEQRTILKNGIASDHVSSGQIRKKFRSSTPNRNNNSSIHNNNNTSLTSASAVPTTTSLQFLNSTTTDRTANESGFMDASSHHLNSSPESDVGERDDVKYVCPICEVVSATPHEFTNHIRCHNYSSGSTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHPQQRNNTSLGSGGGSSGPGSGGSGNGDGESYESDGCSTDSSASSANNNNHNNNNNNNYKRKSTDDDSGIIKRRMKTINNNIINETESEHSVVAMQKYCCPVCSRNDFINMLSLGTHMDREHPGIPAKCRQCEIVFKSHKSLNAHRCLNKVNITQGFKDITFVDFSSEKFPLIARSLCEQSIRTPITSQKFECPKCYRAFPCASAVESHTKDCGDSPQDYSIRKRVSSESSEEENRRDEFFAHLDLRNKSAMSLASTMSSPRTSEKSDINKTDLEKTPRSSHYHYNESKDLADIQSILNVTSSSNSFLRNFENVVNTPSSDYGLGKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLSAAGAGPYRCNMCPYSIHDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSSCEDPIKKLQMFSSPEFDDDEPSLPKDRSTPVSHLKEILQSDSSPVKIQVKSLEKLMDNSTSSIKEEEKEPVDESLSVPETTRPIDLSMDVLDLSKKAKLPEVEVEKVDIKPEVLANEKNHPWLLAQQQLFNETIPKIDPAHYLQLSQLYRNFMFPSIQPFLFPNSFIPNNFSEMNKFPPMLLNPMFPAPPDGQSPSSIPVGSNISPAPLIKPIENQSSTASPTQLHPSVSPQLNIPRHTLGGGGCQPPTTVGIMPHIQNTGPVKMVIKNGVLMPKQKQRRYRTERPFTCEHCAARFTLRSNMERHVKQQHPQYWAQRQRSGHHIMRRGGSVMPQVSSTSISSPNSAMTSNHFNAISDQVKYAILAQQLKARKDTDILQQALAQNKGPSNNHLNLANNNVPHSSTASNSFEDDDPKLVIDEENDLDEDEEDDELYDETKPEDLSSSTNCAAKKVAETILEQAMKASSSKPAPIAAVQPEDAKEPNDFCLKVANNMLARAESVGKYLKKVASSSFKDESPDLVSVSKLVDNATNPLSSFNSYFRPSDLANQMEQSDEEGLVASGSASESNNSGNEEPQSTGGRDEKRKSAYSLAPNRVSCHYCQRTFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDIPDPIPMPKVEEQPIETCKLPSVPSMNLSIPNVKPESLIAASDLPFKCHLCDSSFAERSQSLDHIKTNHSQEFALLLAKGALDADADYNHMHSAEDDERVDGRGKYPDYANRKVKCAFCMHRFWSTEDLRRHMRRHSGERPFQCEICLRKFTLKHSMLRHMKKHSNGHHNLQPNTLNSGSDMSDDEQPTSLMHPNPLISHKIQDMISRAEAWRNSNLSGEQKENIAQHSRLRLDKDGSGTVVTGGEDNSDLISDLLGISGQGILNKLLSSADEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00203875;
90% Identity: iTF_00203875;
80% Identity: -