Bmor026120.1
Basic Information
- Insect
- Beris morrisii
- Gene Symbol
- -
- Assembly
- GCA_951812415.1
- Location
- OX638313.1:51070953-51073838[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-11 1.3e-08 35.3 0.0 5 39 12 46 11 51 0.84 2 2 0.62 4.4e+02 1.6 0.0 17 26 391 400 383 400 0.86
Sequence Information
- Coding Sequence
- ATGGCATCACAGCGAAAATACATCGTTGTAGACATTGATGTTGCCCTACATGAAATAAGAAATGGCCTTTCGATCCATGCAGCGGCTAAAAAGTATAACATTCCAAGGCCAACGCTCCAAAATAGAATACATCAACGATCTGCGAAAAGCAAAATGGGTCCCAAAACTGTACTGACATCCGTTGAAGaatcaaaaattgttgaatGGATTTTTGAGAACCACGCAAGAGGCTTTCCAAGAAGGAAACATGAGGTCCGTGGTGTTGTGAAAGAATTCTTGAACGCATGCCCTAGATCAAATTTATTCATTGACAACTATCCTGGACAGAAATGGTATAAATCTTTTCTTAAAAGGCATCCTCAAATCGCATTAAGAACGCCGGAAGCGGTTACGGAATCAAGCGCTTGCGTCTCTGAAAGAGATATCAGAGGATGgttcaatcaaatttttaattattttaaagaaaaagagtTAACTGATGTCCTGAAAGACCCATCTAGAGTTTTCAATGGGGATGAATCAGGGTTTCTTTTATGCCCAAAAGGTGGTAATGTTTTGGCTCGAATGGGATCAAAAAACGTTTATGAAGTCGATAGAGGAAGAGCAAAGGAAAGCATTACTGTAATGTTCACTTTTTCAGCTAATGGCTTCATTTTTCCTCCAATGATTGTATATCAGTATAAACGAATTCCAAAAGATATTATCGACTTGATCCCGAATGGAATTAACTATACAAAAACGGATTCAGGTTGGATGACATCTGAAGCGTTTCAgtattatattgaagaaattttttatcCTACATTAGTATCAAATAATGTTCAGTTTCCCGTGGTCCTCTATGTCGATGGGCATAAAACGCATCTGAGTTATGCTCTCTCAAAAATCTGCAAAGAGCTCAAGATTATACTGATATGCTTGTATCCAAATTCAACAAGAATTCTTCAGCCAGCTGATGTTGCCATTTTCAAACCGATCAAACTATGTTGGACAAAAGAACTTCAACAATGGAGAATGAATAATCTTGAAGAACAATTCACAAGAAAATATTTCGCACCTTTGCTAAAGAAAGTTGTCGATAAATGTGTGAAAAAAGACATAATAATTAACGGCTTTCGAACCTGTGGTTTGTATCCTTTCGATGCAAATGCGATAGATTTTTCGAAGTGTCTTGGGACGTCAAAAGCAGCCGATGAATATATAAGCCCCGATTCACCTAACAATTTAAAAACCATCAATTTATCAGAGTTTAAAGAGATTATTGGGGATGAGAAAGTTCAACAATTGGAAACCATCGAAACTAGTTCTTGTACATATTCGGCAGATCTCCTATTGTTacataaaatttatgaaactttAAAAATGCGTTCCGCGACAAATTTTgaAAAGCCGCTGCAGTGCCTTTAG
- Protein Sequence
- MASQRKYIVVDIDVALHEIRNGLSIHAAAKKYNIPRPTLQNRIHQRSAKSKMGPKTVLTSVEESKIVEWIFENHARGFPRRKHEVRGVVKEFLNACPRSNLFIDNYPGQKWYKSFLKRHPQIALRTPEAVTESSACVSERDIRGWFNQIFNYFKEKELTDVLKDPSRVFNGDESGFLLCPKGGNVLARMGSKNVYEVDRGRAKESITVMFTFSANGFIFPPMIVYQYKRIPKDIIDLIPNGINYTKTDSGWMTSEAFQYYIEEIFYPTLVSNNVQFPVVLYVDGHKTHLSYALSKICKELKIILICLYPNSTRILQPADVAIFKPIKLCWTKELQQWRMNNLEEQFTRKYFAPLLKKVVDKCVKKDIIINGFRTCGLYPFDANAIDFSKCLGTSKAADEYISPDSPNNLKTINLSEFKEIIGDEKVQQLETIETSSCTYSADLLLLHKIYETLKMRSATNFEKPLQCL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00203439;
- 90% Identity
- iTF_00203439;
- 80% Identity
- -