Basic Information

Gene Symbol
Kdm5
Assembly
GCA_951812415.1
Location
OX638314.1:6545867-6552659[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.3e-26 4.6e-22 79.1 0.0 2 89 258 341 257 341 0.95
2 2 3.1 1.5e+04 -2.7 0.0 48 65 1219 1236 1218 1247 0.80

Sequence Information

Coding Sequence
ATGGTCTCGAAAATCGAGAAGCAGACTTTCTGTGATGTAATAATTGCGGCACAAACGGCCGCTAGCGGTGGCCAGACGCCAACAACGCCACAGCAAGCGGCCACAAAGACTCAACAGCAGTCCGGTACCGGCGCAGTCCTGTCCGTTTCACCGAATCGAAATTCCCCGGCGGCAGCGGCTGCGGCACCATCGTCGTCCGTTCAACGTGGTGCTTCGCTGTCGCCACCGCCGCCTGTTCTTACGCCCCAGATAATCCTTGGTGGCGGAAGCTTCAGTAAAAACGGTGGATCGGGCGAGGCGACGAAACGGGGAGCAGGTCATCAAGACGACGGCGATTCGTCCAACGATAGCAGTATGTTGGCCGGTTTTCCGGCGGACGATTCAATGCCGCCGCCGCTTATTGCGGCCGGACAACAGAGCAACAGCAGCCCGACGCttcagcagcagcagcaacaacaacaacatccacCGCAGCCGCCGCCACCATCCAACTCCAAGCTTCCGATTCCGCCGACTTCCTTTTCGATCAACAAAAACGAAGAGTTCAACTTTATAAAGCCGCCCGAGTGTTTAGTCTTCAAGCCGAACGACGAGGAGTTCAAGAATCCGCTCGCCTACATCAGCAAAATCCGGTCGGTCGCCGAGAAGTTCGGCATTTGTAAAATTCAGCCACCAAAGACATGGACGCCGCCGTTTACCGTGGACGTCGACAAGCTCCGCTTTACGCCGCGCGTTCAACGTCTCAACGAGCTCGAGGCAAAGACAcgcgtgaaattaaattttctcgaTCAGATCGCCAAGTTCTGGGAGCTGCAGGGCTCGTCGCTGAAAATTCCGATGGTCGAACGGAAGGCGCTCGACCTGTACACGCTTCATCGAATCGTTCAGGAAGAGGGCGGCATGGAGCAGACGACCAAAGAGCGCAAATGGTCAAAGGTGGCGCAACGAATGGGCTATCCGTCCGGCAAAAGTGTCGGTACGATTCTCAAGGGTCACTACGAGCGTATCCTGCATCCGTTCGATATTTTCACGATTGGTAAATCGTTGGCGAGTGGCGGTGGCGGCGGTACCGCAGCAGCGGTTGGCGACTCGCTCGCCGACGAAGACGACACAAAGACCAAACTCGAAACGGAAACCGACGATCAGGACTATAAGCCGCACGGTATTGTGTCGCGACAGCAGATTACGCCGCCGAACGAAACGACCGCTCGACGATCGAAACGTTTCGCCAACAGTTCGACCGCCGGCTGTGGCGTCTCCAACTATAGCTACAGTAGCGGCTTAACGTCGCTGGGCGGTCATCATGTGAGCGCGTTCACCCCGATCAAGGACGAGTTGAAGCGCGAAAAGAAGGACGATAATGATCTCAATGCCGGACCAGATTATCGACGGCCGCAAATTTGCGGTGCCGGTCCGAAAATGGCCGGCTACAGTACGAAGAGCGGCCGGTCACGAATGGCCGGAATGAATGCCGGGTCCGTTAAGGGCGCCGCTGCTCGCCAGCACAACAACAAGAAACAGAACGATGTCGATCCGCTGGCCAAGTACATTTGTCACATCTGTAATCGCGGCGACGTCGAGGAAGCGATGCTTCTGTGTGACGGCTGCGACGACAGCTATCACACGTTCTGCCTGATACCGCCCCTAAGCGATATCCCGAAGGGCGACTGGCGGTGCCCCAAGTGCGTTGTCGAGGAGGTCAGCAAGCCGGTCGAGGCGTTCGGATTCGAGCAGGCACAGCGCGAATATACGCTTCAGCAGTTCGGCGAGATGGCCGATCAGTTCAAGGCCGACTATTTCAATAtgtcggtgcacctggtaccgaCGGAGCTGGTTGAGCGCGAATTTTGGCGAGTCGTGTCCTCGATCGATGAGGACGTGACGGTCGAATACGGTGCCGATTTGCATACGATGGATCACGGTTCCGGCTTTCCGACAAAGAGTTCGCTGTACTTGTTGCCGGGCGATCAGGAATACGCCGAATCCAGTTGGAATCTGAACAATTTGCCGCTGCTCGAAGAATCGATACTGGGGCACATCAATGCCGACATTAGCGGAATGAAAGTGCCGTGGATGTATGTCGGGATGTGCTTTGCGACATTCTGCTGGCACAACGAGGATCACTGGAGCTACTCGATCAACTACTTGCATTGGGGCGAGCCGAAAACGTGGTACGGTGTACCCGGCTGTAAGGCTGAGGCGTTCGAGGAGACAATGAAGAGTGCCGCGCCCGAACTATTCCAATCACAGCCGGATCTGCTGCATCAACTGGTCACGATTATGAACCCGAATATTCTGATGAATGCCGGCGTTCCGGTCTATCGGACGGATCAGCATGCTGGCGAGTTTGTTATAACGTTTCCGCGGGCGTATCACGCTGGCTTCAATCAAGGCTATAATTTTGCGGAGGCGGTGAATTTTGCGCCTGCCGATTGGATGAAAATGGGCCGTGAATGCATCAATCACTACTCGACGTTGCGGCGATTTTGTGTGTTCTCGCACGACGAGCTCGTTTGTAAGATGGCGCTCGATCCGGACAAGCTGAATCTGGGCATTGCGACTGCTTGTTACTTGGACATGGCTGAAATGGTCGATTCCGAGAAGAAGCTCCGGAAGTCGCTGCTTGATTGGGGCGTGACCAAGGCTGAACGTTCTGCTTTCGAGCTGATACCGGACGATGAACGGCAGTGCGAATCGTGCAAGACGACCTGTTTCCTATCGGCTGTGACGTGCACTTGTACGACCCTCTTAGTATGTCTTCGTCATTACACGGAACTGTGTGAATGCTCGCCGGACAAACACACCCTAAAGTATCGTTATACGCTCGACGAGCTGCCGCTCATGCTGAAAAAGCTGAAGGTGAAGGCCGAAAGTTTCGAGAATTGGCTATCGAAAGTTCGCGATGTTCTCGATCCGAACACGCCGACATCGATAACGCTCGAGGATCTGCAGGAACTGGCACAGGAGGCCGAGGACAAGAAGTTTCCCAGCTCGATACTGCTCGAACGGCTTAATTCAGCCGTTCTGGAAGCGGAAAAATGCGTGACGGTGATACAACAGTTGGACATTAATAAAATGCGAACACGCACACGAAATTCGAGCGATGCGGCCAAGTACAAGTTGACGCTCGACGAGCTGGAAATGTTTGTTCAGGAAATTGATAATCTGTGCTGTATCATTCAGGAAGGACAAAGCGTTCGCGAGCTTCAGGCACTGGGCAAGGAGTTTCTCGAGACGGCACAACAGTTGCTCAGCGAGCCGATCTACAAAGCGGACGAACCGGACATTGAGAAAATTATCGAGGAGGGCTCGACTCTGTGCATCGAACTGCCCGAAATCAAGCTGCTGAAGGATCGATTGCAACAAGTCAATTGGTACAATCGCGTTCGGGAATTTCGTGATGCGCAAGAGAAGATCCCGATTGCCGATATTCATAACTTCCTCAAGGAAGGCTTAAGTATTACGCCCGATTCGATTATCGAGAAGGAACTGTACGAACTTCAGGAGATTCTGATGAGCGTCGAAGATCTTGAAATCGTTGCGAAGCGCTGTTTCGAAAGCGATACGCAGCACGAGCTGCCCGAAATCGAATTGCTGCTGGAACGTGCCGACGAGCTGGAAGGTGAACTGCCGTCGCAAGCGGCACTAAAAGATGCCGTCAAGAAGGCCAAGGAATGGTTGCAAATTGTCGAAATTCTCCAATCGAACGAAAGCTATCCGTACTTTCATACACTCGAGAGTTTAGTGAATCGCGGCAAAAATATCCCGTTTCAATTGGAAGAACTGAAACGAATGGAAGAACATTTGACGAGCGCGCGATCGTGGAAAGAGCGAACATCGCGGACATTCCTCAAGAAGCAGACTGCCTTTAATTTACTCGATGTTCTGTCGCCGCGATCCGAAGCCGTCATGTACGGCtcgaaattgaaaaagaaagcAATGGAAGAACAATTCAACGAGGAAATGAGCCCCGTACAAATGGTCAACGCTTTCAAGAATGCCGAAGAAAAAGAAATCATTGAAATGCGACAGTATCGCAAGCAGAACATGGAAAAGAATCCGACCGAGGACAAGTATTGCAAGTGTAAGCGAAAATTTCAGGGTCTCATGTATCAGTGTCAATTATGCAAGGATTGGTTTCACGAATCGTGCGTACCGCCACCGAAAAACACGGTACGACCGCGACCGAGCAACACAACGACACCGTCGAATGCATTGACCGTGCCGCAGCTGAATACGCGCGAAAAAGATCGCGAACCGAAATACTTGTGTCAGTCGTGTATGCGATCGCGTCGTCCACGTCTCGAAACCATTCTATCGTTGCTCGTTTCGTTGCAGCGTTTACCGATCCGATTGCCCGAGGGCGAAGCGTTACAGTGTCTAACGGAGCGTGCGATGAATTGGCAGGATCGCGTACGGCAAGCATTCTCGACCGAAGATGTTGTATCGGCGCTCGCTCTACTATCGAACATATCGCAAAAGAACAGTTCGTCGGGCATCGATTGTAAATTGGGCACGGACAGCCTGGACGACTATCCGAAACACGATGGACGCGGTAATAAGCGACGATCTCTGGTTACGTCACGAATCCGAACTGCTTCGGACGATGAAATGGACACGAGTTCGGAGGACGAGAGCTTTGCGATCGGAACAAGAGGCACGATCGGAACATCGCCGATTATTAATTCGGGCGATGATAGTCCGCCGTCGTCGCCAAcAAAAATTGAACATGCTTATTCGGTTCCCGTGCCGCATGTCATTTCAAGCGGTGGCAGCAGCTTTAGCAAATTGATAAGCGGCTTGGGATCGCCCCTATCCAAGGCCGACATGCCCCTAATTACGTTGACAAAAGTGACACGCGAGGCGCTCGAGCTACTTATGATGGAAGGTGATCTAATGGAAGTATCGTTGGACGAAACTCTGCACATTTGGCGGATTTTGAATGCAGCTAAGCCGTCCATCTCAGACTTGGCATACATTcactataaatttaaaattgtgCCACCAACAAATGATATTCTAGTCACAAGTAATAGAAAAAAACGACGCTCTGAAGAAAATTTTGCATCGCAGGCGGCGAAAAGATCAAACAAAAACCAGTTATCAACAAATTCCAATTTAACAGTATCGACGTCATCACCGAATAATGCGACCGGAGGTGTTACGAACGCATCACAGCAAAATGTCGGACcggcgacgacgacgacgacgacgaaaaTGAAGCGAGGACGTAAAATGAAACTGGTCACAAAAGAAGCGGACGCGGCTATTACTTTGTCCGCGAGTACCGTTATTAGTGTAGCGAGTGCGACCAGTGGCGGAGTACCCGAAACGAAGAAGCGTAAACGTGGCAAGAAGGCAACGCGACAGGAACAAATTGCTGCAACGGTTGCAGCTTCGACATCCGACGACGACGAGGAATGCAGCGCTGCAAATTGTGCTAGACCGTCAGGACGAGAAGTCGACTGGGTACAATGTGACGGTGGCTGTAACAAGTGGTTTCACATGTATTGCGTTGGTCTCGACAAAGATCAGATCAAACCGGATGACGATTTCATATGCAAACGATGTAAGAAGACTGCAGCTGCGGCCGCTGTTTCGACGACGACGACGGCAGCATCGATAGATTCCGGAGCCACAACAGCGATCGGTGATTCGTCACCGGCAACACCAACGTCCAATTCAAAGGAATCCGAAACGGGGACGacgacaacaacaacaacagcagcagcagcagcaacaacccCACCACCAGCAGCCCTTGCTACAAACATTAGTAATAGTAATAGCAGTAGTGGTAGCGGTGCCGGAGGAGGGAGTGCGGGTAGTGGAAGAGGTAGCCGACAAAAAACTACCATCACCGTTTCGTCGCCATCGTCACAGATACCGATTAAAAACAATAGCGGTAGCAGTAGCAGTACAATTAGTAATAGTAACAGTGAGAAGAAAATTGATTGTGATTTTGATACGAAAAAAACAACAGATACGACCGAAGATGACGATGAGGGGGGCGGCGTCGATCAGGTAAACGTTGCAGTATCGGCAACAGAAAGCACAACGGCAACAGCAACGACTGCGGCTACAGTACCATCGGAAAGTACGACGATCACTGTAACTGCTCCGCTCAATTCATCTCCAAAGTCCTCGTCCGcaaccaccaccaccaccacgaCCATTACCACACCAACCACGAGCCCTCTGAAACAAGTTTCATCAAGCTAA
Protein Sequence
MVSKIEKQTFCDVIIAAQTAASGGQTPTTPQQAATKTQQQSGTGAVLSVSPNRNSPAAAAAAPSSSVQRGASLSPPPPVLTPQIILGGGSFSKNGGSGEATKRGAGHQDDGDSSNDSSMLAGFPADDSMPPPLIAAGQQSNSSPTLQQQQQQQQHPPQPPPPSNSKLPIPPTSFSINKNEEFNFIKPPECLVFKPNDEEFKNPLAYISKIRSVAEKFGICKIQPPKTWTPPFTVDVDKLRFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWSKVAQRMGYPSGKSVGTILKGHYERILHPFDIFTIGKSLASGGGGGTAAAVGDSLADEDDTKTKLETETDDQDYKPHGIVSRQQITPPNETTARRSKRFANSSTAGCGVSNYSYSSGLTSLGGHHVSAFTPIKDELKREKKDDNDLNAGPDYRRPQICGAGPKMAGYSTKSGRSRMAGMNAGSVKGAAARQHNNKKQNDVDPLAKYICHICNRGDVEEAMLLCDGCDDSYHTFCLIPPLSDIPKGDWRCPKCVVEEVSKPVEAFGFEQAQREYTLQQFGEMADQFKADYFNMSVHLVPTELVEREFWRVVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGCKAEAFEETMKSAAPELFQSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWMKMGRECINHYSTLRRFCVFSHDELVCKMALDPDKLNLGIATACYLDMAEMVDSEKKLRKSLLDWGVTKAERSAFELIPDDERQCESCKTTCFLSAVTCTCTTLLVCLRHYTELCECSPDKHTLKYRYTLDELPLMLKKLKVKAESFENWLSKVRDVLDPNTPTSITLEDLQELAQEAEDKKFPSSILLERLNSAVLEAEKCVTVIQQLDINKMRTRTRNSSDAAKYKLTLDELEMFVQEIDNLCCIIQEGQSVRELQALGKEFLETAQQLLSEPIYKADEPDIEKIIEEGSTLCIELPEIKLLKDRLQQVNWYNRVREFRDAQEKIPIADIHNFLKEGLSITPDSIIEKELYELQEILMSVEDLEIVAKRCFESDTQHELPEIELLLERADELEGELPSQAALKDAVKKAKEWLQIVEILQSNESYPYFHTLESLVNRGKNIPFQLEELKRMEEHLTSARSWKERTSRTFLKKQTAFNLLDVLSPRSEAVMYGSKLKKKAMEEQFNEEMSPVQMVNAFKNAEEKEIIEMRQYRKQNMEKNPTEDKYCKCKRKFQGLMYQCQLCKDWFHESCVPPPKNTVRPRPSNTTTPSNALTVPQLNTREKDREPKYLCQSCMRSRRPRLETILSLLVSLQRLPIRLPEGEALQCLTERAMNWQDRVRQAFSTEDVVSALALLSNISQKNSSSGIDCKLGTDSLDDYPKHDGRGNKRRSLVTSRIRTASDDEMDTSSEDESFAIGTRGTIGTSPIINSGDDSPPSSPTKIEHAYSVPVPHVISSGGSSFSKLISGLGSPLSKADMPLITLTKVTREALELLMMEGDLMEVSLDETLHIWRILNAAKPSISDLAYIHYKFKIVPPTNDILVTSNRKKRRSEENFASQAAKRSNKNQLSTNSNLTVSTSSPNNATGGVTNASQQNVGPATTTTTTKMKRGRKMKLVTKEADAAITLSASTVISVASATSGGVPETKKRKRGKKATRQEQIAATVAASTSDDDEECSAANCARPSGREVDWVQCDGGCNKWFHMYCVGLDKDQIKPDDDFICKRCKKTAAAAAVSTTTTAASIDSGATTAIGDSSPATPTSNSKESETGTTTTTTTAAAAATTPPPAALATNISNSNSSSGSGAGGGSAGSGRGSRQKTTITVSSPSSQIPIKNNSGSSSSTISNSNSEKKIDCDFDTKKTTDTTEDDDEGGGVDQVNVAVSATESTTATATTAATVPSESTTITVTAPLNSSPKSSSATTTTTTTITTPTTSPLKQVSSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
iTF_00202297;
80% Identity
-