Basic Information

Gene Symbol
Kdm5
Assembly
GCA_949128065.1
Location
OX421898.1:10153420-10161425[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.1e-26 5.6e-22 79.2 0.0 2 89 247 330 246 330 0.95
2 2 3 1.9e+04 -2.6 0.0 48 65 1211 1228 1210 1239 0.80

Sequence Information

Coding Sequence
ATGGTCTCGAAAATCGAGAAGCAGACTTTCTGTGATGTAATAATTGCGGCACAAACGGCCGCCAGCGGTGGCCAGACGCCAACGACCCCGCTACAAGCGGCCACAAAAACTCAACAGTCGTCCGGTGCGGCCGCAGCGGTCCTGTCCGTGTCACCGGCAGCGGCACCGTCGTCGTCTGTTCGACGTGGTGCTTCGCTGTCGCCACCGCCGCCCGTCCTTACGCCCCAAGTAGCCCTCGGCGGTATCAGTAAAAACGGCGGATCGGTCGACGCGACGACGACGAAACGGGCAGCTGGTCAGCAAGACGACGGCGATTCGTCCAACGATAGCGGGATGATGGCCGGGTTTCCGGCGGACGATTCAATGCCGCCGCCGCTTGTTGCGGCCGGACAACAGGGCAACAGCAGCCCGACCCtccagcagcagcaacaacatcCACCGCAGCAGCCGCCTTCCAACTCCAAGCTCCATATTCCGCCGACTTCCTTTTCGCTCAACAAAAACGAAGAGTTCAACTTTATCAAGCCGCCCGAGTGTCTCGTCTTCAGGCCGAACGACGAGGAGTTCAAGAATCCGCTCGCCTACATCAGCAAGATCCGGTCGGTCGCCGAAAAGTTCGGCATTTGTAAAATTCAGCCGCCAAAGACATGGACGCCGCCATTTACCGTGGACGTCGACAAGCTTCGCTTCACGCCACGCGTTCAACGTCTCAACGAGCTGGAGGCCAAGACGCGCGTGAAATTAAACTTTCTCGATCAGATCGCCAAGTTCTGGGAGCTGCAGGGTTCGTCGCTGAAAATTCCGATGGTCGAACGAAAGGCGCTCGACCTGTACACGCTGCACCGAATCGTTCAGGAGGAGGGCGGCATGGAGCAGACGACCAAGGAGCGCAAGTGGTCGAAAGTCGCGCAACGAATGGGCTATCCGTCCGGCAAGTCGGTCGGTACGATTCTCAAGGGTCACTACGAGCGGATTTTGCATCCGTTCGATATTTTCACGATTGGTAAGGCGTTGGCGAGTGGCGGAGCCGGAAGCGGTGACGCTGTTGAGGATGACGAAGACGACACGAAGACCAAGCTGGAAACGGAAGTGGACGATCAGGACTACAAGCCGCACGGTATTGTCTCGCGACAGCAAATCACGCCGCCGAACGAGACAACGGCACGACGATCGAAACGGTTCGCGAACAGCTCGACCGCCGGATGTGGCGTCTCCAACTACAGCTACAGCGGCGGCCTGACGTCGCTGGGCGGACATCTGCTGAGCGCGTTCACCCCCGTCAAGGACGAAACGAAGCGCGAAAAGAAGGAAGACGATAATGATCTCAACGCCGCCGCCGGGCCGGATTATCGACGACCGCAGCAAATCTGCGGTGCCGGACCGAAAATGGCCGGCTACAGTACGAAGAGCGGACGGTCACGAATGGCCGGAATGAATGCGGGAGCGGCAGTCGTCAAAGGGACCGCCGCCGCCGCCCATCACAACAACAAGAAACAGAACGATGTCGATCCGCTGGCCAAGTACATTTGCCACATCTGCAATCGGGGCGACATCGAGGAAGCGATGCTTCTGTGCGACGGCTGCGACGACAGCTACCACACGTTCTGCCTGATACCGCCGCTGAGCGATATTCCGAAGGGCGACTGGCGGTGCCCCAAGTGCGTTGTCGAGGAGGTCAGCAAGCCGGTCGAGGCGTTCGGATTCGAGCAGGCGCAGCGCGAGTACACGCTTCAGCAGTTCGGGGAGATGGCCGATCAGTTCAAGGCCGACTACTTTAACATGTCCGTGCACCTCGTGCCGACGGAGCTGGTCGAGCGCGAATTCTGGCGAATTGTATCGTCAATCGATGAGGACGTGACGGTTGAATACGGCGCCGATTTGCACACAATGGATCACGGTTCCGGCTTCCCGACCAAGAGCTCGCTGTACCTGCTGCCCGGTGATCAGGAGTACGCCGAATCCAGCTGGAACCTGAACAATCTGCCGCTGCTGGAAGAGTCGATACTGGGGCACATCAATGCCGACATAAGCGGCATGAAGGTGCCGTGGATGTACGTCGGGATGTGCTTTGCGACGTTCTGCTGGCACAACGAGGATCACTGGAGCTACTCGATCAACTACTTGCATTGGGGCGAGCCGAAAACGTGGTACGGTGTGCCCGGCTGTAAGGCCGAGGCGTTCGAGGAGACCATGAAGAGTGCCGCGCCCGAACTGTTCCAGTCGCAGCCCGATCTCCTGCACCAGTTGGTCACGATCATGAATCCGAATATTCTGATGAATGCCGGCGTTCCGGTCTACCGGACGGATCAGCATGCGGGCGAGTTTGTTATAACGTTTCCGCGTGCGTATCACGCTGGCTTCAATCAGGGCTATAATTTTGCGGAGGCGGTGAACTTTGCGCCAGCTGATTGGATGAAAATGGGCCGTGAATGCATCAACCACTACTCGACATTGCGGCGATTTTGTGTGTTCTCGCACGACGAGCTGGTCTGTAAGATGGCGCTCGATCCGGACAAGCTGAATCTGGGCATTGCCACCGCTTGTTACTTGGACATGGCCGAAATGGTCGATTCCGAGAAGAAGCTGCGCAAGTCGCTGCTTGATTGGGGCGTGACCAAGGCCGAACGTTCGGCTTTCGAGCTGATCCCGGACGACGAACGACAGTGCGAATCGTGCAAGACGACCTGTTTCCTATCGGCTGTGACGTGCACGTGTACAACCCTCATAGTATGCCTCCGTCACTACACGGAACTGTGCGAATGCTCGCCGGACAAACACACCCTCAAGTATCGGTACACGCTCGACGAACTGCCGCTCATGCTCAAGAAGCTGAAGGTCAAGGCCGAAAGTTTCGAGAACTGGCTATCGAAAGTTCGGGACGTTCTCGATCCGAACACGCCGACTGCAATAACGCTCGAAGATCTACAGGAACTGGCACAGGAGGCCGAGGACAAGAAGTTTCCCAGCTCGATACTCCTCGAACGGCTCAATTCGGCGGTTTTGGAAGCGGAAAAATGCGTGACGGTGATACAACAGTTGGACATTAACAAGATGCGGACACGGACGCGAAATTCAAGCGATGCGGCCAAGTACAAGTTGACGCTCGACGAGCTTGAGATGTTTGTTCAGGAGATCGATAATCTGTGCTGCATCATTCAGGAGGGACAGAGCGTGCGCGAGCTTCAGGCTCTGGGCAAGGAGTTTCTCGAGACGGCACAGCAGCTGCTCAGCGAGCCGATCTACAAGGCGGACGAGCCGGACATTGAGAAGATCATCGAGGAGGGCTCGACTCTGTGCATCGAACTGCCCGAGATCAAGCTGCTCAAGGATCGATTGCAGCAAGTCAACTGGTACAATCGCGTTCGCGAGTTTCGCGATGCGCAAGAGAAGATCCCGATTGCCGATATTCACAACTTCCTCAAGGAAGGCTTAAGTATTACCCCCGATACGACCATCGAGAAGGAACTGTACGAACTCCAGGAGATTCTGATGAGCGTCGAAGATCTGGAAATAGTTGCGAAGCGATGCTTCGAAAGCGACACGCAGCACGAGCTGCCCGAAATCGAGCTGCTGCTGGAGCGGGCCGACGAGCTGGAAGGTGAACTGCCGTCGCAAGCGGCCCTAAAAGATGCCGTCAAGAAGGCCAAGGAATGGCTACAAATCGTCGAGATTCTCCAGTCGAACGAAAGCTATCCGTACTTTCATACGCTCGAGAGTCTCGTCAATCGCGGCAAGAATATCCCGTTTCAACTGGAAGAGCTGAAACGAATGGAAGAGCATCTGACCAGCGCACGATCGTGGAAGGAGCGAACATCGCGGACATTCCTCAAGAAGCAGACCGCCTTTAATCTGCTCGACGTCCTGTCGCCGCGTGCCGAGCCCGTCATGTACGGCTCGAAGCTGAAGAAGAAAGCAATGGAGGAGCAGTTCAACGAGGAAATGAGCCCGGTACAAATGGTGAACGCTTTTAAGAATGCCGAAGAGAAGGAAATCATGGAAATGCGACAGTTGCGCAAGCAGAACATGGAAAAGAATCCCGCCGAGGACAAGTACTGCAAGTGTAAACGGAAATTCCAGGGACTGATGTATCAGTGTCAATTATGCAAGGATTGGTTTCACGAATCGTGCGTACCGCCACCGAAAAATACCGTACGACCGCGTCCCAACAACACAACGACACCGTCGAATGCGCTGACCGTGCCGCAATTGAATACGCGCGAAAAGGATCGCGAACCGAAATACTTGTGTCAGTCGTGTATGCGTTCGCGTCGTCCACGCCTCGAAACGATTCTATCGTTGCTTGTTTCGTTGCAACGGCTGCCGATACGATTGCCCGAGGGCGAAGCGTTGCAGTGTCTGACCGAGCGAGCGATGAACTGGCAGGATCGCGTGCGGCAAGCTTTCTCCACGGAAGATGTCGTCTCGGCGCTCGCTCTACTGTCGAATATATCGCAGAAGAACAGTTCGTCCGGTTTGGATTGTAAGCTGGGAACGGCCGACAGCCTGCTGGACGACTATCCGAAACATGATGGTCGCGGTAAGCGACGATCTATGGCCGCGTCACGCGTTCGCAATGCTTCGGACGATGAAATGGACACGAGTTCGGAAGATGAGAGCTTTGCGATCGGTACACGGGGCACGATCGGAACATCGTCGATTATTAATTCGGGCGATGATAGTTCGCCGTCGTCGCCAACAAAAATTGAACATGCCTATTCGGTTCCCGTGCCGCATGTGATTTCAAGCGGTGGCAGCAGCTTTAGTAAATTGATCAGCGGCTTGGGATCGCCCCTATCCAAGGCCGATATGCCCCTAATTACGCTGTCGAAGGTGACACGCGAGGCGCTCGAGCTACTTATGATGGAAGGTGATCTAATGGAAGTATCGTTGGACGAAACGCTGCACATATGGCGGATTTTGAATGCTGCTAAGCCGTCCATCTCAGACTTGGCATACATTCACTATAAGTTTAAAATTGTGCCACCAACAAATGATATTCTAGTCACAAGTAATAGGAAAAAACGACGGTCTGAAGAAAATTTTGCATCGCAGGCGGCGAAAAGATCAAATAAAAACCAGCTATCAACGAATTCCAATTTAACAGTATCGACGTCATCACCGAATAATGCAACGGGTATTACGAACGCATCACAGCAAAATGTTGGACCCGCGACGAAAATGAAGCGAGGACGTAAAATGAAACTGGTCACAAAAGAAACGGACGCGTCCATTACTGTGTCGACGAGCACCGTGGTCAGTTCGCCGAGTGCAACCGGTGGCGGAGTACCCGAAACGAAGAAGCGTAAGCGTGGCAAGAAGGCAACGCGACAGGAACAAATTGCTGCAATGGTTGCAGCTTCGACATCGGACGACGACGAGGAATGCAGCGCTGCAAATTGTGCTAGACCGTCAGGACGAGAAGTCGACTGGGTACAATGTGACGGTGGCTGTAACAAGTGGTTTCACATGTACTGCGTTGGTCTCGACAAAGATCAGATCAAACCGGACGACGATTTCATATGCAAACGATGTAAGAAGACTGCAGCTGCGGCCGCTGTTTCGACGACGACGACAACGGCAGCATCGATAGATTCCGGAGCGACAACGGCCGCGATCGGTGATTCGTCACCGGCAACACCAACGTCCAATTCGAAGGAATCGGAAACGGCGACAACGACGACGACAGCACCATCCCCTGTTACAAACATTAGTAATAGTAATAGTAGTAGTGGAGGAGGGGGTGGCGGAAGGGGTACGCGACAAAAAACTACCAACACAATCGCGTCCTCACAGATACCGATTAAAAACAATAGCGGTAACAGTAGCAGTACAATTAGTAATAGTAACAGTGAGAAGAAAATTGATTGTGATTTTGATACGAAAAAAACAACAGACGACGATGAAGGGGGCGATCAGGTCGACGACCTTGCAGTATCGTCAACAGAAAGCACAACGGCTGCGGCTACAGCACCATCATCGGAAGGCACGACAACGAACGTTGCTTCTCCGCTCAATTCATCTCCAAAGTCGTCGTCCGCAACAACCACCACCATTACCACACCAACCACAACCCCTGTGAAACAAGCTTCATCAAGCTAA
Protein Sequence
MVSKIEKQTFCDVIIAAQTAASGGQTPTTPLQAATKTQQSSGAAAAVLSVSPAAAPSSSVRRGASLSPPPPVLTPQVALGGISKNGGSVDATTTKRAAGQQDDGDSSNDSGMMAGFPADDSMPPPLVAAGQQGNSSPTLQQQQQHPPQQPPSNSKLHIPPTSFSLNKNEEFNFIKPPECLVFRPNDEEFKNPLAYISKIRSVAEKFGICKIQPPKTWTPPFTVDVDKLRFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWSKVAQRMGYPSGKSVGTILKGHYERILHPFDIFTIGKALASGGAGSGDAVEDDEDDTKTKLETEVDDQDYKPHGIVSRQQITPPNETTARRSKRFANSSTAGCGVSNYSYSGGLTSLGGHLLSAFTPVKDETKREKKEDDNDLNAAAGPDYRRPQQICGAGPKMAGYSTKSGRSRMAGMNAGAAVVKGTAAAAHHNNKKQNDVDPLAKYICHICNRGDIEEAMLLCDGCDDSYHTFCLIPPLSDIPKGDWRCPKCVVEEVSKPVEAFGFEQAQREYTLQQFGEMADQFKADYFNMSVHLVPTELVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGCKAEAFEETMKSAAPELFQSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWMKMGRECINHYSTLRRFCVFSHDELVCKMALDPDKLNLGIATACYLDMAEMVDSEKKLRKSLLDWGVTKAERSAFELIPDDERQCESCKTTCFLSAVTCTCTTLIVCLRHYTELCECSPDKHTLKYRYTLDELPLMLKKLKVKAESFENWLSKVRDVLDPNTPTAITLEDLQELAQEAEDKKFPSSILLERLNSAVLEAEKCVTVIQQLDINKMRTRTRNSSDAAKYKLTLDELEMFVQEIDNLCCIIQEGQSVRELQALGKEFLETAQQLLSEPIYKADEPDIEKIIEEGSTLCIELPEIKLLKDRLQQVNWYNRVREFRDAQEKIPIADIHNFLKEGLSITPDTTIEKELYELQEILMSVEDLEIVAKRCFESDTQHELPEIELLLERADELEGELPSQAALKDAVKKAKEWLQIVEILQSNESYPYFHTLESLVNRGKNIPFQLEELKRMEEHLTSARSWKERTSRTFLKKQTAFNLLDVLSPRAEPVMYGSKLKKKAMEEQFNEEMSPVQMVNAFKNAEEKEIMEMRQLRKQNMEKNPAEDKYCKCKRKFQGLMYQCQLCKDWFHESCVPPPKNTVRPRPNNTTTPSNALTVPQLNTREKDREPKYLCQSCMRSRRPRLETILSLLVSLQRLPIRLPEGEALQCLTERAMNWQDRVRQAFSTEDVVSALALLSNISQKNSSSGLDCKLGTADSLLDDYPKHDGRGKRRSMAASRVRNASDDEMDTSSEDESFAIGTRGTIGTSSIINSGDDSSPSSPTKIEHAYSVPVPHVISSGGSSFSKLISGLGSPLSKADMPLITLSKVTREALELLMMEGDLMEVSLDETLHIWRILNAAKPSISDLAYIHYKFKIVPPTNDILVTSNRKKRRSEENFASQAAKRSNKNQLSTNSNLTVSTSSPNNATGITNASQQNVGPATKMKRGRKMKLVTKETDASITVSTSTVVSSPSATGGGVPETKKRKRGKKATRQEQIAAMVAASTSDDDEECSAANCARPSGREVDWVQCDGGCNKWFHMYCVGLDKDQIKPDDDFICKRCKKTAAAAAVSTTTTTAASIDSGATTAAIGDSSPATPTSNSKESETATTTTTAPSPVTNISNSNSSSGGGGGGRGTRQKTTNTIASSQIPIKNNSGNSSSTISNSNSEKKIDCDFDTKKTTDDDEGGDQVDDLAVSSTESTTAAATAPSSEGTTTNVASPLNSSPKSSSATTTTITTPTTTPVKQASSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
iTF_00203276;
80% Identity
-