Basic Information

Insect: Beris chalybata
Gene Symbol: ZNF711
Assembly: GCA_949128065.1
Location: OX421896.1:116357604-116360564[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.75 4.7e+03 -1.0 0.0 22 44 151 173 149 177 0.82

2 12 0.0015 9.1 7.7 0.0 21 50 178 207 170 211 0.85

3 12 0.0005 3.1 9.2 0.1 20 48 210 238 206 243 0.78

4 12 1.6 9.7e+03 -2.0 0.0 22 44 240 262 238 266 0.73

5 12 0.079 4.9e+02 2.2 0.1 21 50 301 330 296 333 0.87

6 12 0.28 1.7e+03 0.4 0.2 21 44 371 394 363 399 0.77

7 12 0.9 5.6e+03 -1.2 0.0 27 44 410 427 407 435 0.86

8 12 0.03 1.9e+02 3.5 0.5 18 51 428 462 424 465 0.83

9 12 7.2e-06 0.045 15.1 0.5 21 48 490 517 481 521 0.90

10 12 0.094 5.9e+02 1.9 0.0 26 46 526 546 520 552 0.88

11 12 0.014 88 4.6 0.1 26 51 554 579 546 580 0.82

12 12 5e-05 0.31 12.4 0.7 21 48 577 604 574 607 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.75	4.7e+03	-1.0	0.0	22	44	151	173	149	177	0.82
2	12	0.0015	9.1	7.7	0.0	21	50	178	207	170	211	0.85
3	12	0.0005	3.1	9.2	0.1	20	48	210	238	206	243	0.78
4	12	1.6	9.7e+03	-2.0	0.0	22	44	240	262	238	266	0.73
5	12	0.079	4.9e+02	2.2	0.1	21	50	301	330	296	333	0.87
6	12	0.28	1.7e+03	0.4	0.2	21	44	371	394	363	399	0.77
7	12	0.9	5.6e+03	-1.2	0.0	27	44	410	427	407	435	0.86
8	12	0.03	1.9e+02	3.5	0.5	18	51	428	462	424	465	0.83
9	12	7.2e-06	0.045	15.1	0.5	21	48	490	517	481	521	0.90
10	12	0.094	5.9e+02	1.9	0.0	26	46	526	546	520	552	0.88
11	12	0.014	88	4.6	0.1	26	51	554	579	546	580	0.82
12	12	5e-05	0.31	12.4	0.7	21	48	577	604	574	607	0.89

Sequence Information

Coding Sequence: ATGTCGTCAGTTTTTAGTTCGATTAAAGTGCCCAATTTGGAGTTCAGTAAACTCCAAATTCTTGATTTATTAAGTCTTTTCACGGATATTTCGGTGTCTCCAAACGATGGCCTTCCCGATAATATTTGTAGCGAGTGCATTAGTAAAATTTATCAATCGTATACATACAAGTGGAAATGTGAGAAATCCGATGCctttttgaagaaattgaagatgGATGAAAAATGTGTAATCGATTTCAAAAACTCCGCACATCAGCAAGAAACAGGAATCGTACCAATAAAAACAGAACCGACCGAACACGAGGCTTCATATGACGAGGAGTCAAAACTACGTGACCTATCATCATATTTTGATCACGAAAAGAATAGTCAGGAAATATCTATCGTTCAAGAATTTAAACAAGAGCCCGAAATCGAAATATACACACAAGATATCGACGAACATTTAGAAAACAATACACAATGTTCGGTATGTTCGAAAGTCTTCAAGAGCAAACAATATCTGAAAATTCACACCAGAATTCATTCAGGAGAGAAACCATTTAAATgccaaatttgtgaaaaagagTTCGGATTTAAGCGCAATTTGAAAAAGCATATGATTACGTCACATGCCGATAAAACATCCAACGAAAGCAAAGCTACATGTCCGATATGTTCCAGAATATTCCTCTATAAATATCTATTGGATCGACATATGTTAATACATACGGCAGACAAACCATTTCAATGCGAACTTTGTCCGATCAAATTTCGTTATAAACACGTTTTAAAAAGTCACATGATGAAGACACATTCCATCGGAACTACGTCGGCTAACAGGAAATTTGATTGTACGACTTGTTCTAGATCATTCGCAGTTCAAAGCGATTTAAATCGACATATCCGAATTCATACCGGAGAAAAACCATTTCAATGCGAAGTTTGTCCGAAAAAGTTCCgtttaaaaaaagatttaaaatcgcACACGCAaagaatacatattttaaaaaaggaaaagaaacgTGCTGCCGCCGAAAAAACAAAGAAACTACAGTTTGAATGTCCGACATGTTCGAAACTCTTTCAGCATAAGTATCTAATGAATCAACATATGATACAACATTCGACCGAGCGACCATATCAGTGtgatatttgtatgaaaaagtTCGGTTTGCAGCAAACTTTAAAATGTCATATACAAAATGTACATTCCGACGATACAGTGatcaataaaaaattgaaatgttcGATTTGTTCGAAATTATTTCGATTTAAAAGCGATTTGATGCAACATATGCGAACACATTCGGAAGAGAAAGCATTTCGATGCGAACTATGTCCGAATATTTATCGATTCAAATCGAATTTAACGGTACATATACAACGGATACATCTACGAAAAAATCAAACTTTTAGTTGTACGACATGTTCGAAAGTATTCGGAATCAAAAGTGATTTAAATAAGCATGTGCGAATTCATACAGGCGAAAGACCGTATCTCTGTGAAATTTGTCCAGCTAATTATCGGTACAGTCGTAATTTGAAAgaacatattcaaaaaatgcACGATACAACGGTCGATACAGAATTGAAATGTTCGATTTGTTCGAAATTATTTCGATTTAAAAGCGATTTGATGCGACATATGCCAATTCATTCGGAAAAGAAAACATTTCGATGCAAACTATGTCTAAAAATGTATCGATACAAATCGAATTTAAAGAAGCATATGCAAATTCATTCAGGCGAAAAACCGTATCTCTGTGAAATTTGTCCAGCTTATTATCGGCACAGGCGTAATTTGAAAGAACATATTAAAGAAATGCACGCTGTTGAGGGCGAAAGTGATGGTAAACAGCAATCGGTACAAGGAATAGATATGCCGGTAAAAGAATAG
Protein Sequence: MSSVFSSIKVPNLEFSKLQILDLLSLFTDISVSPNDGLPDNICSECISKIYQSYTYKWKCEKSDAFLKKLKMDEKCVIDFKNSAHQQETGIVPIKTEPTEHEASYDEESKLRDLSSYFDHEKNSQEISIVQEFKQEPEIEIYTQDIDEHLENNTQCSVCSKVFKSKQYLKIHTRIHSGEKPFKCQICEKEFGFKRNLKKHMITSHADKTSNESKATCPICSRIFLYKYLLDRHMLIHTADKPFQCELCPIKFRYKHVLKSHMMKTHSIGTTSANRKFDCTTCSRSFAVQSDLNRHIRIHTGEKPFQCEVCPKKFRLKKDLKSHTQRIHILKKEKKRAAAEKTKKLQFECPTCSKLFQHKYLMNQHMIQHSTERPYQCDICMKKFGLQQTLKCHIQNVHSDDTVINKKLKCSICSKLFRFKSDLMQHMRTHSEEKAFRCELCPNIYRFKSNLTVHIQRIHLRKNQTFSCTTCSKVFGIKSDLNKHVRIHTGERPYLCEICPANYRYSRNLKEHIQKMHDTTVDTELKCSICSKLFRFKSDLMRHMPIHSEKKTFRCKLCLKMYRYKSNLKKHMQIHSGEKPYLCEICPAYYRHRRNLKEHIKEMHAVEGESDGKQQSVQGIDMPVKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00203787;
90% Identity: iTF_00202850;
80% Identity: iTF_00202850;