Basic Information

Insect: Beris chalybata
Gene Symbol: L
Assembly: GCA_949128065.1
Location: OX421897.1:4591701-4608483[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 6.5e-06 0.00087 20.8 1.7 1 23 167 189 167 189 0.98

2 19 0.52 69 5.4 5.7 1 23 195 217 195 217 0.98

3 19 2.8e-07 3.8e-05 25.1 3.1 1 23 223 245 223 245 0.99

4 19 2.3e-05 0.0031 19.1 0.2 1 23 251 273 251 273 0.98

5 19 0.31 42 6.1 0.2 3 23 331 353 329 353 0.85

6 19 0.0031 0.41 12.4 0.7 2 23 376 398 375 398 0.96

7 19 0.077 10 8.0 0.5 1 23 496 518 496 518 0.95

8 19 0.12 16 7.4 1.0 2 23 527 548 526 548 0.95

9 19 0.00098 0.13 14.0 1.8 1 23 556 580 556 580 0.91

10 19 7.2 9.6e+02 1.8 0.1 1 19 585 603 585 605 0.82

11 19 0.13 17 7.3 1.0 1 23 615 638 615 638 0.96

12 19 0.0017 0.23 13.2 2.9 1 23 672 694 672 695 0.96

13 19 8.5 1.1e+03 1.6 0.6 1 23 839 863 839 863 0.85

14 19 0.00048 0.064 15.0 4.7 2 23 872 894 871 894 0.96

15 19 0.14 19 7.2 0.1 1 23 900 922 900 922 0.92

16 19 0.59 79 5.2 0.4 2 23 930 951 929 951 0.96

17 19 3.4 4.5e+02 2.9 0.5 2 23 1037 1058 1037 1058 0.93

18 19 0.002 0.27 13.0 0.0 1 23 1068 1090 1068 1090 0.97

19 19 0.16 22 7.0 0.3 1 23 1097 1119 1097 1119 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	6.5e-06	0.00087	20.8	1.7	1	23	167	189	167	189	0.98
2	19	0.52	69	5.4	5.7	1	23	195	217	195	217	0.98
3	19	2.8e-07	3.8e-05	25.1	3.1	1	23	223	245	223	245	0.99
4	19	2.3e-05	0.0031	19.1	0.2	1	23	251	273	251	273	0.98
5	19	0.31	42	6.1	0.2	3	23	331	353	329	353	0.85
6	19	0.0031	0.41	12.4	0.7	2	23	376	398	375	398	0.96
7	19	0.077	10	8.0	0.5	1	23	496	518	496	518	0.95
8	19	0.12	16	7.4	1.0	2	23	527	548	526	548	0.95
9	19	0.00098	0.13	14.0	1.8	1	23	556	580	556	580	0.91
10	19	7.2	9.6e+02	1.8	0.1	1	19	585	603	585	605	0.82
11	19	0.13	17	7.3	1.0	1	23	615	638	615	638	0.96
12	19	0.0017	0.23	13.2	2.9	1	23	672	694	672	695	0.96
13	19	8.5	1.1e+03	1.6	0.6	1	23	839	863	839	863	0.85
14	19	0.00048	0.064	15.0	4.7	2	23	872	894	871	894	0.96
15	19	0.14	19	7.2	0.1	1	23	900	922	900	922	0.92
16	19	0.59	79	5.2	0.4	2	23	930	951	929	951	0.96
17	19	3.4	4.5e+02	2.9	0.5	2	23	1037	1058	1037	1058	0.93
18	19	0.002	0.27	13.0	0.0	1	23	1068	1090	1068	1090	0.97
19	19	0.16	22	7.0	0.3	1	23	1097	1119	1097	1119	0.96

Sequence Information

Coding Sequence: ATGGCATTGAAAATGCTCTACCGCGGACCAAGTTCCAGGCTAGAAACTCTAATCGAAAAAATCCAACAGAACAAGGAGGTCACCAATGATTTATACTCAACGCACACATCATCGAGCTATTCACCCTCAACATCCGAAGGAGCTGTAACACCAACCTCATTACTCCACCATCACCATCACCACAAAGATGGTGAAGTTAATCGTCTTAGAGGAAGTCATCATCGTCGTCGTACCACTTCCGCGACAAATGGATCCTTGGATGGGCACGACGAGAACGATGAGGACGACGCTGATTCCCACGACGATGGGGTTATTGTATCGCGACATAATAAGACCGCGGCGGCTGGTGGCGATGATGATGACGAGGACGACACCAATGAAGCCCGTCACCCTGGGATGGGTGATGGTAGCGGTAAAATCCCGACGAAATTACGAAAAATCGAAAGGGATGGCGAAAAGATGACAAGCGACGGCATTAAAACCACCTCGGATGGATCCTATCAGTGTCAGTTCTGCGATAAATCATTTCCACGTCTTGGATATCTCAAGAAACATGAACAGAGCCATGCCGAACATCTTCCTTTCAAATGCGAATATTGTGCCCGCCTATTTAAACACAAACGTTCACGTGACCGTCACACAAAACTGCATACCGGTGATCGACGATATCGTTGTCCACATTGCGAAGCAGCCTTTTCTCGAAGCGATCACCTTAAGATTCACATGAAGACTCACGACAACCAGAAGCCATTCCAATGTACGGTCTGCAATCGAGGATATAACACGGCCGCGGCCTTAACTTCGCATATGCAAAATCATAAGAAGCAGGCGGCACTTTTGGGAACTGGACAAGTCTTGAATTACAGCCCAAGATCGACAGGGTCTGGATCGAGTAATGGAAGTTTTCATAAACGTCGATACGCTATGACCAACTGCAGTCCAAATAGAGTCGACTACCGAAAGCATAATCGCGTCGGCCCTTTTATACCGTGCATGTACTGCACAAAAGCTGATTTTACTTCGCTGGAACAGCTCAATTCGCACATTCAGTCGATGCATGAACACGCCACTCCTAAAGACGGCATCATCCCTGCTGGTCATCCTAGTAATCCTGTTTTTCAACTATCCTGCGAGTACTGTACGATGAAATTTCCCAACATACCGACTATGTTCCAGCATATGCGAACCACCCACATCGATCGTTTGGCTAGTCCCAATTCCTACTTCGAGCACTTTAATCGGCTGGCCGCTTCGGGAACGTTCAGTCCACGCTTGCTAGCCGCTAGTGCTAGTTCCACTCCTCGTTACGAGGATCTGAAGGTGAAAGTCGAACAGCCTAGTCCTAGTCACGATCGGCGCAGTCAAACCGACTCCGAAAAGGACGAGGAACAAGTCAGTCCGACCGATTTAAGTCAACCAAAGAAGCGGCTTCAGAATCCTGTCGAATGCGATTCAGCCGTTGCTGAAGAGAAGGGTCCAGGTACGTTTCTGTGCAACCAGTGCAATGCTGGTTTGCCAGACTTCGATACGTTCCGATCGCATTTGAAGACGCACATTGCCCAAGGAGTCACCAGTTTGGTCTGTCATCACTGTGGATTGGCTCTCAGGGATCCAGGCGAGCATGAGCGACACGTGATTTCGCACTTTCTTATTACGAATTCAGAGTTCTCGTGCACGAACAGCTGTAAGAAAAGCTTTGCTAAATCTGACGATCTTCAGAAGCATCTGTTCGAAAGTCACATTCAGATGATGTACAAATGCTCGATCTGTTCCGATCTTTTCGATACGAAAGTAGCGATTCAGGTGCATTTCGCTTGTACGCACTCCAACGAAAACAAGCTGTTTCGTTGTTCGGCGTGTATGGAGTCGTTTCGGAGCGAGAAGGACTTTTCGAATCATGTCCGTGCTCGGCATTCACACAACGGTTCGTCCTCCATACAGTGTATGTTCTGTCGAGCTGTTTGTTCGTCCGAGCTGGAAATGCACTTCCATTTGGCTGCACACGCTCGACAGTTTCGTTGTCCATCGTGTCCCGAAACGTTTCACGTCGAATTTCTACTCGATCGTCACATGCAAACCCACCATTTGCAGAAGGAAGCTTCCAGCTCTACTGGAACACGAATAGTTGCTAGTCCTTCGAACACATACCATTCGCAGTTCAGCAAGCAGCCTTCCGTTCCGAACAACAACAATATTCTCGACTACAACACCTTTGCAGCTGGCAAGACGCTCTTCCAAATTCCGGGTAGCAAGTTCTACAACCCGCTGCAAGTGGACACGAATACAGTCGGCGGGCTCGGCAAACATTCGGCCCTGATGTACGGACTTGGACAGCGTTACATCGACGCCAACAAGACCCTGATGGATATGTACAATTACAATCAGGAGAACAAGACCACGTCGAGCTACTTCCTTAATCCCAGTAATTTCGACAACAGTCGTTCTGCAGCTGCTCTTAAAAGTCGCCAACAGCAAGAAGAGAAGTCAACCGTCGATCGTTCCGGAACAAGCGGATTCAGTTGCGGAATTTGCGAACGAGCAGACTTTCGGACGGAAAACGAGGTCCATTCGCATCGGAAAATCGTGCACAATTTGAAAACGGGTGTAAGTCTCCGCTGTGCCTATTGCAATGGGAACTTCAAGTCGCGCAGCGAACTCGAGCACCACATGAAGACGTGCCACAATTCGACCGGGAAACACAAATGCCTGATTTGTGACGAGATCTTCCCATCGCCGGCTATTCTTGCTGAGCATAAGCTTCAGCACTCGAAGGTCGGTCAGTCGGGGAAATGTTCGCACTGTTCCACTGCCCTGGGCGATGTCTCTGCCTTCAAGTTACACTTGAGCGAACATAATGCCGAGGGACAAATCCCAGTGCAATGCATATGCTGTCGACAAACGTTGAACTCGGACTTTGAAGTCGGACTTCATGCCAAATTCCACACGAAATCCTCCAGTAGTCCTGAAAACCTGTGCGCCTTGTGTCTGGAAACGCTACCATCCACATCGGAATCTCGTGTCTGTGAGAAATGTTGTCGCAAACATAATCTAACGGCCAAGTTTAATTTGCGGTTCGAAGGTAACGGTACGCGAAACTACGTCGAGAACCGTTGCAATCTCTGCAAGATGATTTTACCGCATGCTCAACGGCTCCAGGAGCATTTGGTCGAACACACGTTTGTGGGATGCGAGGAACGTGGCTACTCTTGCTACATCTGTTCGGCAGTCTTCACAGTTCCGGCCGGCCTTCTCAGTCACATGCTCGAGCATGGCTTAAACGCCCGTCCGTACGACTGCAACCTGTGCTCCGAGAAGTACTTCTTCCGCGCCGAACTGGACAACCATCTAATCGAACATGAACACAACGCGGTACCAATGAACGGAAGTGGAGGTGTTGTGACCATCAAGAACGAACAGTTATCGGAGCAACAGAAGGATCCCGAACCTGTAGAAAGAGTAGCACCTTCAGAACCGAGTCAAGACCCCTTGCCAAACCAACAGGTCAAAGCTGAAACTATCGATGAAGCAGTTACTGCAGAAAACGAAGACGATGACGAGGAGTACATCGAAGTTGAGAAAGTTCCAGACGCAGCTTTAGCTAGTAACACCCAGGAAAAGGAGAACTAA
Protein Sequence: MALKMLYRGPSSRLETLIEKIQQNKEVTNDLYSTHTSSSYSPSTSEGAVTPTSLLHHHHHHKDGEVNRLRGSHHRRRTTSATNGSLDGHDENDEDDADSHDDGVIVSRHNKTAAAGGDDDDEDDTNEARHPGMGDGSGKIPTKLRKIERDGEKMTSDGIKTTSDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCEYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKKQAALLGTGQVLNYSPRSTGSGSSNGSFHKRRYAMTNCSPNRVDYRKHNRVGPFIPCMYCTKADFTSLEQLNSHIQSMHEHATPKDGIIPAGHPSNPVFQLSCEYCTMKFPNIPTMFQHMRTTHIDRLASPNSYFEHFNRLAASGTFSPRLLAASASSTPRYEDLKVKVEQPSPSHDRRSQTDSEKDEEQVSPTDLSQPKKRLQNPVECDSAVAEEKGPGTFLCNQCNAGLPDFDTFRSHLKTHIAQGVTSLVCHHCGLALRDPGEHERHVISHFLITNSEFSCTNSCKKSFAKSDDLQKHLFESHIQMMYKCSICSDLFDTKVAIQVHFACTHSNENKLFRCSACMESFRSEKDFSNHVRARHSHNGSSSIQCMFCRAVCSSELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHLQKEASSSTGTRIVASPSNTYHSQFSKQPSVPNNNNILDYNTFAAGKTLFQIPGSKFYNPLQVDTNTVGGLGKHSALMYGLGQRYIDANKTLMDMYNYNQENKTTSSYFLNPSNFDNSRSAAALKSRQQQEEKSTVDRSGTSGFSCGICERADFRTENEVHSHRKIVHNLKTGVSLRCAYCNGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCSTALGDVSAFKLHLSEHNAEGQIPVQCICCRQTLNSDFEVGLHAKFHTKSSSSPENLCALCLETLPSTSESRVCEKCCRKHNLTAKFNLRFEGNGTRNYVENRCNLCKMILPHAQRLQEHLVEHTFVGCEERGYSCYICSAVFTVPAGLLSHMLEHGLNARPYDCNLCSEKYFFRAELDNHLIEHEHNAVPMNGSGGVVTIKNEQLSEQQKDPEPVERVAPSEPSQDPLPNQQVKAETIDEAVTAENEDDDEEYIEVEKVPDAALASNTQEKEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00324759;
90% Identity: iTF_00203884;
80% Identity: -