Bcha039346.1
Basic Information
- Insect
- Beris chalybata
- Gene Symbol
- mex3b
- Assembly
- GCA_949128065.1
- Location
- OX421898.1:9297414-9303211[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2 4.4e+04 -18.0 36.0 156 237 28 113 6 140 0.41 2 2 4.5e-09 9.9e-05 23.0 28.3 93 225 392 513 356 580 0.59
Sequence Information
- Coding Sequence
- ATGTCGACTCTCTTTACCGAATTGGAACGCGCTGCGAACGCCCTCAACTGTTCCGGTACGACTTATTCTGTacttcaacaacaacaacatcatcaCACCAACAAtggcggcggcggcggcggaacgaacaatcatcatcatcatcattcgCATCATCAACAACAAGGAGTACATCAATCGTCGACGGGATCATCTTCACCAATCAATAACGGTCACATGATACCATCATCGTCCCTATCATCGTCACCGCTCTCATCACAACAATCGTCAACATCACCAACGAATCTTTCGCTCTCGTCGTCGTCCTCCTCGTCAACAACGTCGCCGTCGTCGTCGTCATCATCAACATCGCCCCTATTCCTCCGTAACGTCACCGATTCTTTCAACAACGCCGCCATCATTAAACGGTGTCGGCTGTCATCAATTACTCAACAATGCTACGACACAATTGCAATCACCAACGGGTGGttgtggtggtggtggtggtggttcGTCGAACGTAAACAGTCTCGAGGATCAACGAGCCTTGCAGCTGGCATTCGAACTATCCATGGTTGTAAAATCAAGGCGTTACGCGCTAAAACCAACACGTACATAAAAACGCCGGTACGCGGCGAAGAGCCGGTTTTCGTAGTGACCGGCCGCAAAGAGGATGTCGGCAAAGCGAAACGCGAAATACTTTCGGCTGCCGAACATTTTAGCCTGATACGAGCGTCACGTAAGCCGGCCCTTACCGGTCTGACCGGTAGCGGTAAAGGTTCGCCGCCGGGACCGCCAACAAATATACCGGGACAGGTAACGATACAGGTACGTGTACCGTATCGTGTTGTTGGTCTTGTTGTCGGGCCTAAAGGTGCAACCATCAAGCATATCCAGCAGCAGACGCACACGTACATTGTGACGCCGTCACGCGATAAAGAACCGATTTTCGAAGTGACCGGAATGCCGGATAACGTACAATCGTCCCGGCGTCAAATCGAAGCTCATATCGCTCTACGTACCGCGGCATCATCCGGTACCGGAACAACAAACGGTACGGCCGCAACAATGGCGGGCAATTTGAATAACGGTATTGGGTCGTTGCTCGGCGACGATGCAAATTCGGAATTTCTCGCGTCGCTCTACAAGAACGGTTTCGGCTCGTTGCTCGGCTACTTGGAGCCGACGTCACCAATCAACGATCATCAAATACAACAACAGCCGCAATTGCATCAGGCGCAGCATCAGTCGCTGCAGCAGGCGCAATCGGCCGGTCTAATTGTCGatcatcaacaacaacagcagcagcaacagcaacaacaacaacaacatcaccaacaacagcagcagcaacaacaacaacatcatcatcatcatcatcatcaacaacagcagcaacaacatcaTCAAACGCaatcacaacaacaacaacaacaacaacagcagcagcagcagcaacaacagtaCGCCCCGGTTCTCTCCTCATCCTCAGTGGGCGGCGGCAGCCGTTCCTGTTCGTCCAGCTCGTCGTCAACATCGTCGAAAAGTGCGACCAACAGTCGTCCCGAACTGATCAACATCTGGAAAAGTTTGGGCGATTCGATCGACGTCGACGAAGGCCTGGGCGAATCGCCCAACATTTGGACGCTTCCGGTCACAACGAGTGCGCTCGGTTCGCGCTGTTCGCCCTCAACATCGGTTAGTCCGACCGATTCGCTACTAGGTGGCGCTGGCGGTTCATCGACGTCATCATCATCGACAAACGGTGGCGGCGGCGGCGTCAACACTGCGGCCAGTTTAATGGCGGCGGCTGCTGCCGCAGCTGCCGCTGCCGCCGCCAATTCGGCAACACTAATGCGTCGCGAATGTTTAGTTTGTGGCGATAAAGAAGTGACCGCAGCGCTTGTACCGTGCGGTCATAATATGTTTTGTATGGAGTGTGCAACGCGCGTTTGTACATCGGGCAATACCGGCAACGATGGTATTTGTCCCGTTTGTAGTCAGCCCGTTATTCAAGCAATACGAATTATACCGTAA
- Protein Sequence
- MSTLFTELERAANALNCSGTTYSVLQQQQHHHTNNGGGGGGTNNHHHHHSHHQQQGVHQSSTGSSSPINNGHMIPSSSLSSSPLSSQQSSTSPTNLSLSSSSSSSTTSPSSSSSSTSPLFLRNVTDSFNNAAIIKRCRLSSITQQCYDTIAITNGWLWWWWWWFVERKQSRGSTSLAAGIRTIHGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVGKAKREILSAAEHFSLIRASRKPALTGLTGSGKGSPPGPPTNIPGQVTIQVRVPYRVVGLVVGPKGATIKHIQQQTHTYIVTPSRDKEPIFEVTGMPDNVQSSRRQIEAHIALRTAASSGTGTTNGTAATMAGNLNNGIGSLLGDDANSEFLASLYKNGFGSLLGYLEPTSPINDHQIQQQPQLHQAQHQSLQQAQSAGLIVDHQQQQQQQQQQQQQHHQQQQQQQQQHHHHHHHQQQQQQHHQTQSQQQQQQQQQQQQQQQYAPVLSSSSVGGGSRSCSSSSSSTSSKSATNSRPELINIWKSLGDSIDVDEGLGESPNIWTLPVTTSALGSRCSPSTSVSPTDSLLGGAGGSSTSSSSTNGGGGGVNTAASLMAAAAAAAAAAAANSATLMRRECLVCGDKEVTAALVPCGHNMFCMECATRVCTSGNTGNDGICPVCSQPVIQAIRIIP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -