Bcha038516.1
Basic Information
- Insect
- Beris chalybata
- Gene Symbol
- lilli
- Assembly
- GCA_949128065.1
- Location
- OX421897.1:108103169-108110599[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 5.7e-08 0.0012 19.4 0.7 12 155 8 150 3 162 0.75 2 7 1.6e-09 3.4e-05 24.6 14.0 329 476 220 363 214 368 0.75 3 7 2 4.4e+04 -8.7 19.5 165 259 456 550 374 576 0.33 4 7 2 4.4e+04 -10.9 23.3 79 243 460 623 422 668 0.42 5 7 2 4.4e+04 -13.7 30.2 109 238 620 754 575 790 0.49 6 7 2 4.4e+04 -13.0 24.3 92 272 854 1040 778 1044 0.37 7 7 1.7 3.7e+04 -5.2 22.7 77 242 1032 1194 1018 1215 0.66
Sequence Information
- Coding Sequence
- ATGGACGATTCTGAACGTATGGAAAGACGGGAACGCGATAAGCTTGCAAGACAGCAAATTCAAAATCCCGCTCCCGAGATATCATTATTTCCGGCACCAGTTCGAGTAAGTCCATCGGAAGGTGATTCCCGGATCGAATCGAAACTGGGCGATTATGCAGTAGCGAAAAAGCTTATTAGCTTAGATCCGGCCAAATGTCATACACAAGTTATCGGAATAACTTCGGCCGGTAAAGGACCGGTACAACGTCCAAATCAACCTATTCAACCGCCACTTGAGGCCGGCTTAAGTTCGTTGTCGACATCAACATTTTCGGCACCGCAGCCACCGAACAATCGAAATCTTCCGCCACCATCGGCCGCTCATCACTATCATCAGCCACATCCTTCGTTACTATCATCACAATCGGGTCGCGGTAGTAGCAGTACGTTTCTTAAGCAACCGGATAATAAACAGCCACCCACCTATAATGGTCGCGTCGGTAGCGGTGGCGGCTATCCAATTCAACCGGTCAATAAACATGATATTCATCCGAAAGGATTAAGTCTCGGACCGCCAGCAATGCCTCCAATGATGTCCAATGGTCGATTAAACGATAAACCGCCGGTTAGTGGATCCATACCGAACGGTGGCGGTCGGTTTCAAGTTCCTTCGGcgccaaaacaaaaatttcccgCAGAAAATTCGGAACCACCGCCATCAGTCAATGGCGACGTTGATTCTATTCTCAAGGAAATGACAATGCGAACAAATTATACACCGTTAACGGAAATAGCTGCGACACCTcgcaaagaaaatgaaaataagttttCATTTGGACAACCAAATCCTCATAAGTATGCCGAGTTGCCTCCACTGTTTAAGCCGCCAAGTAATAAACAGCGAATTGTAAATGTGCCTAAAGCAACGGATCTTGAAAACGATCTTGACCTGTCGGAAAGTGACGACGAACGTAAAAAGCAAACATCTGTTGACCATACGTCTACAACGAATGATAATTCTAGTGAAAGTTCAGACTCGGCCTCAAGTGAATCGGGAAGCGAAGAATCGAATAGCGGAGCCAAGGGTGAAACTTCGACTcAAACGGACAAATGGCATTTAAGTAAATACTTTCTGAAACCTGCAGCAAACGATGCTGTTACGCAACCATCACCGCATGAGATCAATAGTCAAATTCATGAACCGAATATCAAACACGAACCAATGCCGATCGTTGACGATGACAATTTATCACCATCGCCATCAACGTATCGTCTTAACTCATCAAATCAAATTCCTCACTCGTTATCATCGTCTTTGGATATTAAAAAGGAGGGTCTTCCGCTCAGTAGCAGTTTAGATGTGCAACCGAATCAAATTAAGACGGAAACTTTTGagaAAAGTCCGTCAAGTAGTCCCGAAAAGAAACATTCCGATACGGTAGAATCCGATCAGATCGAAAGTGTCTTAGCCGCAGCTCAAGTTCTAGCTGAAATTAAACCAGTATCGGAAATCGGTACCAGTTCGGaagatgaaaagaaaaaatcgaaacgaaaaAAGTCGCCAAGCAAGAAGCCTGGTAAACGTCGACGAAAAGTACAAAAGGAGAAAGTCGGAAGCGATTCGAGCGACGAAGAAGAATTTTCCAGTGCAAACACTTTATCTTCGGAACGTGGACGATCTAACGACAAGGAAAAGAAGACCAGAGGACGGCCACGTAAAAATGCTGCCGCTGTTCCGGTTGTATCTCTTCCGATTGTAGTAAATAAATCGCCGGTAATTGTAACAACACCAGTTAAAAATTCGGTGCCAAATAAACGTGATGCAGTTCGAAAAGCACCAACGCGACGAACATCGCGACAAAGTTCGATGGCAATAAGTCGGGAATTTCTGGGTACAACGAGCGATTCGTCGTCAGACGATCAACGAACAACTGTAAAGAAACCAATTCCGATAATACCACCGCAGCCAGTAATCCTAGCAAAAGTAAACGAATCGAGTCGATTGACTCGAATACAAAAACCTCATAGTCCAGTTGCAACAAAATCAAGTCACGATGATGACGATGACGACGATTCATCGAGTTCATCGCGACACAGTGGCGAAGACAGGCTTTCTTCACCGGCTGATCGAGGCTCATCGCGACAACAATATTCACCAGGACATCGTTCATCTGCACGAAGTAAGCCTTCATCTTCATCGTCTAGTGATGATCATTCCGACAGCGATGACCCAAGAGAAAATAAAAAAATCCGTGATAAaacaaaaagtgataaaaataaaagtgataCATTGCGCAAGCTGTTTGTCCCAAATCGTGGTGAAGGCGGAGCGAAAGGAAAAGGACAAGTTCTGATAGTCGATCAATCCGAAGAGTCGCAGAATCAAACAAAAGAAGTTCCAGTCCATCATGAAAAACTACTGTCACCGATCGCCTTTAAGCATAGTGCCGCCGATGCTTCAAATCAAATCAACGCCAATAATATAAAATCTCCAAGAACTGCCGTCGCACCGTCAGCAGCATCAATCATCAGTAATAACTTGTTACGGACGCCCGAACGGAATCAATCGGCGACAAATTTAAGTGCTAAACATCAAAATGTTGCCGGGAATAATGCAAGTATCAATTCATCGACGACGAACAGCAGTAGCCGAACGAGTGTAATTTGTAAAATCGAATTGTCTCGATTGATTCGCGTACCGTCGGCATGGTATCAGAATTCGTATACATTACGTGGCAGCGGTAGCGCGCAAACTAATAATTCTAGtactaataataatttaataaatttattaacaaatcaTGCAATCCAAAGTGCTACGAGCGACGACGATCGGCGAAAAAGTCCAATAACGTCGGTCACATCGAAAAATAATAACGGCAACGGTAAATTAAATCGTAATTGTTCGGATAACTTACTAAACAGCAACAACCACAGTAATAATAATTCAACAAGTAATATTAGTAACAATTCAAGACTGGTTAATAATGAGTTGATAGTAGGAAATCAATCAGCGGCAGTATCGCGAAATGTTGACGGTATTAGTAAAAGTAGTCTTCAAAGTAATAGCGAAAATACGGGTGGTAACAAAACCATAAATGATAGCAATAGTAACGAAAATTATCCATACAATTTAGATAAGCACAGCAATCGTAACATAACAAAAGAAACGAAAGAACAATCAGCAAATCCAATCCAGCATCAGTCGCAACAATTGATACTATCACCAAAACACGAAGAGCTCCTATTGCGCCATTCGCATAATACAATAAAATCGTCCGGTATAAAGCACGAACAAATCAAATCCGAATTTAACGATGACTACTCGAACTATTCGGCATTACCGTCGTCATCGATATCGGGAACAATCGGCGGGTCCGGTATTACAACAAAACAACAACCGATCGATACGAAATGTAACATATACAACACCGCTGCTGCTGCTGCCGCCGCGATTAGCTTGAATAATACGAGTAATAGTAGTATGAAATCAACGTCGAGTGATGAGCATTCGAAGAGTCGTCGAAAACGTAGTTCGAGTTCGAGTAGTAGTCCGTTCAAGGATAAAAAGAGGAAAAAGGGTACACAGCTGCAAAGCGAAGTTCTAGAACAATTACCTCCAACAAATCACGATCGGTTACCTGAGAAAATAATTCTGCCACCACCCGCACAGCctatacaaaaaatttataagtcATATTTTGAGCGAACGAACGAGGAAGAATTTCGATTGGGAGAGTCCGACGGTTACCTTCAGGAAGCAAAGCATCTAAAACATATGGCCGATAAAGAACCGGACCAATTAAATCAAGTCTCAATCTATTTAACAGCCGTAATTTACTTCCTTTCGTCAGCTTCGTGTATGGAAAGTGAACGACCGCAGCCGGCATTTACCATTTACAAGGATACTCTTTCTCTAATCAAATACATTTCATCGAAAATCTTCCATCCGTCCACCAACGATACTGTGAATAAGATGGCGATATTAAGTCTACGATGCCAGTCATTGATTCatttaaaaatgtataaattgaAGCGAGCGGATAGCAAGGATGCACAGAAAACAGccaatcaattttttaataagggaACTTGTGAAATACTTAACGGGAACACACCATCGATATCGCCCAGTTCGGTTTGTTCGCAGAGTTCAGGTTCGAATACTCCGCCATTACAAATGGTTCCAATACAGGTGCACGCAGCTTTTCAAAGGCaaagtatttattttaactatttatcGACTTCTCACGATTTATGGGATCAAGCTGATATATTGGTTAAGACGGGAAAACATAGTGAAATCATCGACAATCCGCCGCGACTTTAG
- Protein Sequence
- MDDSERMERRERDKLARQQIQNPAPEISLFPAPVRVSPSEGDSRIESKLGDYAVAKKLISLDPAKCHTQVIGITSAGKGPVQRPNQPIQPPLEAGLSSLSTSTFSAPQPPNNRNLPPPSAAHHYHQPHPSLLSSQSGRGSSSTFLKQPDNKQPPTYNGRVGSGGGYPIQPVNKHDIHPKGLSLGPPAMPPMMSNGRLNDKPPVSGSIPNGGGRFQVPSAPKQKFPAENSEPPPSVNGDVDSILKEMTMRTNYTPLTEIAATPRKENENKFSFGQPNPHKYAELPPLFKPPSNKQRIVNVPKATDLENDLDLSESDDERKKQTSVDHTSTTNDNSSESSDSASSESGSEESNSGAKGETSTQTDKWHLSKYFLKPAANDAVTQPSPHEINSQIHEPNIKHEPMPIVDDDNLSPSPSTYRLNSSNQIPHSLSSSLDIKKEGLPLSSSLDVQPNQIKTETFEKSPSSSPEKKHSDTVESDQIESVLAAAQVLAEIKPVSEIGTSSEDEKKKSKRKKSPSKKPGKRRRKVQKEKVGSDSSDEEEFSSANTLSSERGRSNDKEKKTRGRPRKNAAAVPVVSLPIVVNKSPVIVTTPVKNSVPNKRDAVRKAPTRRTSRQSSMAISREFLGTTSDSSSDDQRTTVKKPIPIIPPQPVILAKVNESSRLTRIQKPHSPVATKSSHDDDDDDDSSSSSRHSGEDRLSSPADRGSSRQQYSPGHRSSARSKPSSSSSSDDHSDSDDPRENKKIRDKTKSDKNKSDTLRKLFVPNRGEGGAKGKGQVLIVDQSEESQNQTKEVPVHHEKLLSPIAFKHSAADASNQINANNIKSPRTAVAPSAASIISNNLLRTPERNQSATNLSAKHQNVAGNNASINSSTTNSSSRTSVICKIELSRLIRVPSAWYQNSYTLRGSGSAQTNNSSTNNNLINLLTNHAIQSATSDDDRRKSPITSVTSKNNNGNGKLNRNCSDNLLNSNNHSNNNSTSNISNNSRLVNNELIVGNQSAAVSRNVDGISKSSLQSNSENTGGNKTINDSNSNENYPYNLDKHSNRNITKETKEQSANPIQHQSQQLILSPKHEELLLRHSHNTIKSSGIKHEQIKSEFNDDYSNYSALPSSSISGTIGGSGITTKQQPIDTKCNIYNTAAAAAAAISLNNTSNSSMKSTSSDEHSKSRRKRSSSSSSSPFKDKKRKKGTQLQSEVLEQLPPTNHDRLPEKIILPPPAQPIQKIYKSYFERTNEEEFRLGESDGYLQEAKHLKHMADKEPDQLNQVSIYLTAVIYFLSSASCMESERPQPAFTIYKDTLSLIKYISSKIFHPSTNDTVNKMAILSLRCQSLIHLKMYKLKRADSKDAQKTANQFFNKGTCEILNGNTPSISPSSVCSQSSGSNTPPLQMVPIQVHAAFQRQSIYFNYLSTSHDLWDQADILVKTGKHSEIIDNPPRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00203540;
- 90% Identity
- iTF_00203540;
- 80% Identity
- -