Btab002703.1
Basic Information
- Insect
- Bemisia tabaci
- Gene Symbol
- egg
- Assembly
- GCA_903994105.1
- Location
- NW:217544-253516[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1 3.1e+03 -2.5 0.2 47 70 663 685 657 688 0.79 2 3 0.71 1.9e+03 -1.9 0.0 8 35 924 950 921 952 0.87 3 3 8.4e-13 2.3e-09 36.4 0.0 9 71 1211 1266 1207 1271 0.89
Sequence Information
- Coding Sequence
- ATGGAAGTGGACGATTCTGACGATATCATGGAAATAGATCAAAACGATTCTGTGGCACCCAGTTGGCCAGCTCCGCCAGTCGCCCAGCCGGAGTGTATCGACATGACCAGTGACGATGAAGCCCCAGTTGTCATAAATATCCAATCTAAGGACAGTGCGTCAACTATATTAAAAAAGTTCTGCAAGTCCAATAGTGATCCAGTGCCCGAAGCTCCGACAAATGTAGAGCAgtccatttcaaaattaaatcaaatttctgTAACTGCCGTTAACACAATCGacaatcaaaatttaactagCAACGGTCAGAATTCTAACCACAATGTAAAAGCTGTTGAAGCAGATTGTATTGAGCTTGATGATGATGTTACTATTTGCGATCCTTCTCCGGCAAATCTAACAACCACACTGCCATCTTCTACTGGTAATCCAAAGGATGTTGCTGACTGTGGTGAAAAGTCTGAGGAAACTACCAATGGTCATCAGCCTCTTGTTCAAAATCATTCCAACCAGCAAGCATTAAACCGACTGGTTGAAACCTGTGTCCAAGATAGCTCCAGTTCTAAACCAAACAATTCCAACGATGAATGTGAAATGGTTATTTTAACTGATGacgatgaaaaagaagaaagcaatATTTCAGTTAGCAATGCAGCTCCAGCCTCTGATGCATCTGTTCATTCCAATGGTGAAGAAGCCTCTACAAATACTGATCCGACTGACAAAATAAATTTGACTGatgataAAAATGTCAGAAACTCAGTTTCAAATGATCAGGACTCAGATGTGGTAGTTCTAACTGACGATGAGAATACACCTGATTCAGGGACCCCCAAAGAGGCAGCATCTGATGATGGAAAGTCAGTTGCTTCAGAATCATTAGTTATAGATGAACCTGATCAGAAAACCAGTGTCCATGAGGCCAGTGCAGATGAAACGTCAGTGGAAGATACCATTTCATTGGTAAAAATTGACCTCACCGATGATGAACCCTCTGACATGAAGGATGAGAGCACTGTTTCAACTGCAGCTCTCCAAGGAGAACCCAAGATTTCTGAAAAACTTGAATCTACAACGAAAGACATACCATTGAAAGCAGAGGATGATGAAAAGAAACCTAACTCATGTTCGTTTGACCAAGATATCAATATGGTAATCTTGACGGATGATGAATGTACACCAGACACAAAGAAAACTCCTGCGGAGGTGAAACCTGACAGCGAGGAGTCGACTGATGGGGACAAACCAGTTTCAAATGATCCTCAACAGAAAACGGAAGTTTCTAAAACTGTGGCAGAAGAAAAAGGACGGAAGGAAGTCCCAAAGGACACCGTTCAACTGGTGAAAATTGACCTTACAGATGATGATCCCTCAGAGAAGGAGGTTGAGAAGGTTACCTCTACTGTTCCAGACAAGTCTCTTATCTCCGAAGAATCTAAGATTCCTGAAAAGTCCGAGACTAATAAGCAAGAAGCACCAAAAATAGATGtttgtgaCGTTGATTTAACAGATGAGGAGGGATCTGAACCAAAAGGGGCAACAGGAATTGCCTCGATACAAACTCCTGAAGGAACTATCATCGGGAAAGCAATTAACCCTAACCTAAAAGATGACAGTTTATTCAAGACTCCAAAGCCACCGACAGCAGTGGAGGTTATCGATATTGAAGCGATTCGCGAGAAAAGACTCGGATCATATGAGTGTGTGAACCCTAACTGCAAGTCTGGTGAGGGATTACGTTTAGCGGAGACTTTCGTCATGACCTATTACAATGTGAAGCCAAAAAGAGGGCTCAAAATGTGCGAGGAGTGCTATAACACAGCAATGAACTATGCCGATTCTTTGTTGCAAAAGTTGGAAAAGCATGAATCGATTTTTGATGTCCCACATAATCCAGATAGTCTAATTGTCAGTCTTGATTTGGATTCGGATGATGAATCGGAAACTAAAGCAGAGAATCCAGAACTCAAACGAAGGAAGTTattcaaaacatctgaaaattatcTGGATGAAACAATTCAAAAAGTGCTCAACAAATATGATTTTAAGTTCCAGATGGAGGAAGGCAACAAAAAGGTTGCCTCTGAGATTGAACGCATCAAAGCCGAATTCGACAGCATGAAACTTGAGATCGACGTACACACACAAAACCTAAAAGACATGCACAATCAGATCCATGACCCATATCGACCGAGGTACACGCCGGTCAGAGAGCTTTCAATAATTGACTGTCATATCCAGCCATACGGTTGTAGAGTGCCGTTAAAGACAGACCGCAACAAACCTCTGATCTTCCAACCTAATGTCCCTCAACAACTCTCTCCACAACGCGGCGTCTTTCAACATCCTCAATTACCAGCACCAAGGCAACCAACAACAGCCTTTCCATCATCGCATCGAATGGCAGTGGCAACAAAAAAAGTCACTCCATTCAACAAATCAAACATCTTGGataccaaaaatttctcaaccCTGAACTCTGATATTGTCCAGTTGATTCCTGCCAAGATAATGCCGCCACCTAACCTGCCTTCACAGGGTCCTCTCATAAGAACTCCGGTCAAAGTCAACGAGATCGTGTACTACATGAAATCAACCTTGTACGGTGTTTGGATTCCTGGCAAAGTTATGAAGGTCTCTGCGGTTGACAGGAAGAGTgctCAAGGTCCATTTAAATTCTTGTATAAAATTAGACCAGAACCAGTAAAAAAATACTCTGATGCTTACCGATCGGTATTTGGAAAGTTCTTAGCCTATTACCATCCAGCAAGTGTTAGATTGCCTGTAGGGACTCGcgttatcgcaattttcaaagaggaaaacgACAAGGGGAAGAGTGATAAATTTTATGCAGGAGTCATAGCAGAAATACCCAAGTCAATAAATAAATTCAGGTATTTGGTCTTTTTCGATGATGGATACGCCCAGTATATCAACCACGAGGACATCCGTGTGGTTTGTGAGTCGTCAGCAAATGTTTGGGATGACGTTTTACCTGAGTTCAAGGACTTCATTCAAAAGTATATATCGGACTATCCTGAAAGACCCATGGTGAAGCTTCAAAAGAAGCAGATGGTGAAAACAGAGTGGAATGGCAAGTGGTGGATAGCAAGAGTGCTAGAAATTGATGCATCACTAGTGAAAATGTGGTTTGATGCAGATCGGCGTGTTGAGTGGATTTACCGAGGCTCTACCAGATTAGGACCCTTGTTTGCCGCTCATAAACGGCAAGAATCAGGAGACCGACTTGTACGAGGAAATCTCCGAAATcgcaacACGCCATATGTGGAGTACACTCGACAAGAAGGGGAGGGTGCTGTTGAAAGTAAAGATGGCTCTTACGATTCGCCTCAGGCCTATCCAGAAGTTGTCGAGAAGCGTGCTGTTGCTAGGAAAAGTGGAACTGGAAAACCGTCAATGCAGAGATCACCAGATGCTGCCAGGAAAGAAAATCAAATGACAATTCCCAATACTCGATATATCCCGGTTAAGGTTCCATCAAAATTAGATcTTGTGGACACATCTCGAGCCATTCGACCTCGCACCTTTTCCCCGCACCAGTGTGGGCCCAGATGTGTTTCTTGGGTTGGCTATACGGGAGATGAAGGGAAAGGTTACGGTCCACTTGTACTTCCTTTATTATTTGGATTTGAAAGAGTGCTGACAAAATTAAGGAATAAAGGCATCATATTTTATATAGCACCCTGCGGGCGAAGACTTCGTAACATATCAGAAATTCACCGCTATCTTAGGATAACAAAATCGCTAATGACTGTTGATCAATTCAGTTTTGAAGAATGGGTCAATTGTCTCAGTGAGTTTAAGATAACAAGGTGTTTCAATTATATTAAGgaTCTCTCTTATGGTAAAGAAAAGCAACCGATCTCTTGCGTCAACTACTTAGATAATTTAATGCCACAATATGTTCATTACATCACGGAGAGAGAACCTCGAGAGGGGGTTCATCTCAATTTGGACCCAGGTTTTCTCGTTTGCTGTGATTGCACAGATGATTGCCAGAACAAAGAAAAGTGTGCATGCTGGCAATTAACTATGGAAGGTCAAAAAGTTATTCCGGGTATGGATGATGCTGAGCTGAATGAAGGATACATTTACAGGCGATTGCCGGAGAGAATAGTGACTGGGATTTACGAGTGCAATAGCAGGTGTCGATGTTCAAAGACAACCTGCCTGAATAGAGTTGTCCAGCATCCATTGATGCAAAGGCTACAGTTGTTCAAGACTGAGAGGAAGGGCTGGGGCATCAGATGTCTTAACGATATTCCTATCGGGTCATTTATATGTATTTATGCCGGTCATCTATTGACTGAGAATTCTGCGAACGAGGAAGGGAAAAATTATGGAGACGAATATTTAGCAGAACTTGATTACATTGAAGTAATTGAGAGGATAAAAGAAGACTACGAAGAATCTGTACCTGAAGAATTAATGTCTGAAGCGGAGAAATCAGCAGGAAGTTCCGAAGATTCTGAAGAGGAACGGTCAAAATCAAGACCAACCTCACCGCgatctcgcaagatggatgctGAGTTCGAACTCAAATGTGCGAGTAGTGAGCAAAGTGAATTTAAgaTGATGCTGCGGAAAAAACCGGATAAATCCAAAAAGAAGTCGGATGATAAATCATCAAgtGACGGGGAGAAAAGCTCCAACAAAGAAGATGATGGAGACAGTGATGGAGATGGTGATGACAGAAAACAAAACCGAGCTCCTCTGAGATTCAACCCAACTGTCGATGAAGATCCTGGGGATGAGAAAGAGGGCAAGTCTTTAAGATATCTCTTTGGTGAAGATGAATGTGTATACGTCATGGACGCTAAATGCAATGGAAATATCGGACGATATTTGAATCACTCTTGTGAACCAAATGTTTTTGTTCAGAATGTCTTCGTTGATACGCATGATCTCCGTTTCCCTTGGGTAGCTTTCTTTGCTCTCAATTATATTCCTGCTGGACAGGAACTAACATGGGACTACAATTACGACGTAAATAGTGTACCAGGCAAGGTCCTCTACTGCTATTGTAACAGTTCAGAGTGCCGTGGACGCCttttgtaa
- Protein Sequence
- MEVDDSDDIMEIDQNDSVAPSWPAPPVAQPECIDMTSDDEAPVVINIQSKDSASTILKKFCKSNSDPVPEAPTNVEQSISKLNQISVTAVNTIDNQNLTSNGQNSNHNVKAVEADCIELDDDVTICDPSPANLTTTLPSSTGNPKDVADCGEKSEETTNGHQPLVQNHSNQQALNRLVETCVQDSSSSKPNNSNDECEMVILTDDDEKEESNISVSNAAPASDASVHSNGEEASTNTDPTDKINLTDDKNVRNSVSNDQDSDVVVLTDDENTPDSGTPKEAASDDGKSVASESLVIDEPDQKTSVHEASADETSVEDTISLVKIDLTDDEPSDMKDESTVSTAALQGEPKISEKLESTTKDIPLKAEDDEKKPNSCSFDQDINMVILTDDECTPDTKKTPAEVKPDSEESTDGDKPVSNDPQQKTEVSKTVAEEKGRKEVPKDTVQLVKIDLTDDDPSEKEVEKVTSTVPDKSLISEESKIPEKSETNKQEAPKIDVCDVDLTDEEGSEPKGATGIASIQTPEGTIIGKAINPNLKDDSLFKTPKPPTAVEVIDIEAIREKRLGSYECVNPNCKSGEGLRLAETFVMTYYNVKPKRGLKMCEECYNTAMNYADSLLQKLEKHESIFDVPHNPDSLIVSLDLDSDDESETKAENPELKRRKLFKTSENYLDETIQKVLNKYDFKFQMEEGNKKVASEIERIKAEFDSMKLEIDVHTQNLKDMHNQIHDPYRPRYTPVRELSIIDCHIQPYGCRVPLKTDRNKPLIFQPNVPQQLSPQRGVFQHPQLPAPRQPTTAFPSSHRMAVATKKVTPFNKSNILDTKNFSTLNSDIVQLIPAKIMPPPNLPSQGPLIRTPVKVNEIVYYMKSTLYGVWIPGKVMKVSAVDRKSAQGPFKFLYKIRPEPVKKYSDAYRSVFGKFLAYYHPASVRLPVGTRVIAIFKEENDKGKSDKFYAGVIAEIPKSINKFRYLVFFDDGYAQYINHEDIRVVCESSANVWDDVLPEFKDFIQKYISDYPERPMVKLQKKQMVKTEWNGKWWIARVLEIDASLVKMWFDADRRVEWIYRGSTRLGPLFAAHKRQESGDRLVRGNLRNRNTPYVEYTRQEGEGAVESKDGSYDSPQAYPEVVEKRAVARKSGTGKPSMQRSPDAARKENQMTIPNTRYIPVKVPSKLDLVDTSRAIRPRTFSPHQCGPRCVSWVGYTGDEGKGYGPLVLPLLFGFERVLTKLRNKGIIFYIAPCGRRLRNISEIHRYLRITKSLMTVDQFSFEEWVNCLSEFKITRCFNYIKDLSYGKEKQPISCVNYLDNLMPQYVHYITEREPREGVHLNLDPGFLVCCDCTDDCQNKEKCACWQLTMEGQKVIPGMDDAELNEGYIYRRLPERIVTGIYECNSRCRCSKTTCLNRVVQHPLMQRLQLFKTERKGWGIRCLNDIPIGSFICIYAGHLLTENSANEEGKNYGDEYLAELDYIEVIERIKEDYEESVPEELMSEAEKSAGSSEDSEEERSKSRPTSPRSRKMDAEFELKCASSEQSEFKMMLRKKPDKSKKKSDDKSSSDGEKSSNKEDDGDSDGDGDDRKQNRAPLRFNPTVDEDPGDEKEGKSLRYLFGEDECVYVMDAKCNGNIGRYLNHSCEPNVFVQNVFVDTHDLRFPWVAFFALNYIPAGQELTWDYNYDVNSVPGKVLYCYCNSSECRGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -