Btab001273.1
Basic Information
- Insect
- Bemisia tabaci
- Gene Symbol
- kn
- Assembly
- GCA_903994105.1
- Location
- NW:8323176-8410213[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-245 8.7e-241 799.9 0.0 10 387 30 409 22 410 0.98 2 2 3e-06 0.041 11.8 15.9 410 517 409 516 408 529 0.59
Sequence Information
- Coding Sequence
- ATGTTCGGGCTCCACCACCACCAGGACGCCTCCACGGCCGGcctccaccaccaccaccaccaccaccaccagcCGAGGGGCCCCGTCACCGGCCTCAAGGAGGAGCCCCTCTCCACCTCGCAGCTCGCCGCCGCCAGGTCATGGATGCAGCCTTCCGTCGTCGATCAGTCAAGtgtgGGTGTGGGTAGAGCTCAATTTGAAAAGCAACCTCCTAGCAATTTAAGGAAAtcaaatttcttccattttgtGATAGCCCTCTATGATAGGGGTGGCCAACCTATAGAAATTGAAAGGACAGCTTTTATTGGTTTTATAGAAAAGGATCAAGAGTCAGAGGCTCAAAAAACGAACAATGGAATTCAATATAGACTGCAATTATTATAcgcaaatgGTATAAGGCAAGAACAAGATATATTTGTCAGACTAATAGACTCAGTTACCAAACAGGCAATCATTTATGAGGGCCAAGACAAAAATCCGGAGATGTGCCGGGTACTTTTGACACATGAAGTCATGTGTAGTCGTTGCTGTGATAAAAAAAGCTGTGGTAACAGGAATGAAACTCCGTCAGATCCTGTTATTATCGACAGattttttctaaaatttttccttaagtGCAATCAAAACTGTCTGAAGAATGCAGGCAATCCACGAGATATGAGGAGATTTCAGGTGGTGCTCTCAACTCAAGTGAGCGTGGATGGTCCCTTATTAGCTGTTTCTGATAACATGTTCGTCCATAATAATTCCAAGCACGGTCGACGCGCCAAGAGGTTGGACCCATCAGAAGGTCTATATCCACCTTTACCTGTTGCTACTCCGTGCATAAAAGCAATTAGTCCCAGTGAAGGTTGGACCAGTGGAGGGTCCACCGTTATCATAATTGGAGACAACTTTTTCGACGGACTGCAAGTAGTTTTTGGCACCATGCTGGTTTGGAGTGAGctgatAACATCTCACGCCATTCGAGTCCAAACGCCTCCTAGACACATTCCCGGTGTAGTTGAAGTAACTTTATCGTACAAATCGAAACAGTTTTGCAAAGGCGCTCCTGGTAGATTTGTGTATGTCTctTTGAACGAACCTACTATAGACTACGGATTCCAGAGGCTACAGAAACTAATACCGAGGCACATGGGTGATCCAGAAAAACTTCCCAAGGAAATCATCTTAAAGCGAGCAGCCGACCTGGCAGAAGCTCTGTATAGTATGCCGCGGAACAACCAGCTTGGTCCAAGATCTCCGACGGGTCCAAACTCTAGTATGTTTAACTCTTACACTGGACAACTGGCCGTCTCGGTTCCTGAAAACGGAAATGGACAATGGACTGACGAGGAGTATGGACGAGGCCAAAGTAGTAGCGTTTCACCGCGAGGCGGCTACGGTTCCAGCGCATCGACTCCGCATTCATCGAATGGCGGTTCTTTCAATAACAGCTCGACACCGGGAAGTGGCAACATGAATGGCTCAACTTATTCTAGTGGTGTTGGGAGTATAGTATCGTCTCCATTCGCCACCATGAACCCGTTCGCGCTTCCGACGTGCAATTCGCAATCTTACGGCTCGAGCCCTATCGTCGGCGCATCCAAGTAG
- Protein Sequence
- MFGLHHHQDASTAGLHHHHHHHHQPRGPVTGLKEEPLSTSQLAAARSWMQPSVVDQSSVGVGRAQFEKQPPSNLRKSNFFHFVIALYDRGGQPIEIERTAFIGFIEKDQESEAQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVLSTQVSVDGPLLAVSDNMFVHNNSKHGRRAKRLDPSEGLYPPLPVATPCIKAISPSEGWTSGGSTVIIIGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHMGDPEKLPKEIILKRAADLAEALYSMPRNNQLGPRSPTGPNSSMFNSYTGQLAVSVPENGNGQWTDEEYGRGQSSSVSPRGGYGSSASTPHSSNGGSFNNSSTPGSGNMNGSTYSSGVGSIVSSPFATMNPFALPTCNSQSYGSSPIVGASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00049047;
- 90% Identity
- -
- 80% Identity
- -