Basic Information

Gene Symbol
kn
Assembly
GCA_963978815.1
Location
OZ022218.1:6943175-6968613[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-249 5.9e-246 817.2 18.0 39 563 6 534 1 547 0.89

Sequence Information

Coding Sequence
ATGCAACCCACCGTTCCCGATCAAAGCGGAATTGGTGTTGGACGTGCACACTTTGAGAAGCAGCCACCGAGTAATCTACGCAAATCGAACTTCTTCCACTTTGTGATCGCGTTGTACGATCGCGCCGGTCAACCGATTGAAATCGAGCGGACAGCATTCATCGGCTTCATCGAAAAAGACCAGGAAGCTGACGGCCAGAAGACAAACAATGGCATCCAGTACAGATTGCAGCTGCTGTACGCGAATGGTGTTCGACAAGAACAGGACATTTTCGTACGATTGATTGACTCTGTAACTAAACAGGCGATCGTCTACGAAGGTCAAGATAAGAATCCGGAAATGTGTCGAGTGCTTCTCACACACGAAATTATGTGCAGTCGATGCTGCGACAAGAAATCCTGTGGCAATCGCAACGAAACACCATCAGATCCTGTGATAATAGACAGATTTTTTCTCAAGTTCTTCCTGAAATGCAACCAGAACTGCTTGAAGAATGCCGGAAATCCACGTGACATGAGACGGTTTCAAGTCGTCATAGCGACACAAGTGACCGTCGATGGACCACTACTGGCCATCTCGGACAACATGTTCGTCCACAATAACTCGAAGCACGGCCGAAGGGCGAAGCGGCTCGATCCCGCCGAAGGTAGTTATGTAAATAGTCTTTATCCTCCGTTACCAGTAGCGACACCGTGCATAAAAGCAATTAGCCCCAGTGAAGGTTGGACAAGTGGTGGGTCAACTGTCATCATAGTGGGTGATAATTTTTTCGACGGTCTTCAGGTGGTCTTCGGCACGATGTTGGTGTGGTCTGAGTTAATAACACCTCATGCGATTAGGGTGCAAACCCCACCCCGGCATATACCTGGCGTGGTCGAGGTGACACTGTCATATAAATCAAAACAGTTCTGCAAGGGAGCGCCTGGTCGATTTGTTTATGTGTCACTCAATGAGCCTACAATTGATTACGGTTTCCAACgattacaaaaattaataccGCGGCATCCGGGCGACCCGGAAAAGTTACCCAAGGAAATCATATTGAAACGCGCTGCGGATTTAGCCGAAGCGCTTTATACAATGCCACGCAACAACCAGCTCTCTTTATCGGCGCCACGCTCTCCGACAATGGGTAATAATGGTATGGCATCCAGCTTCAATACGTATACGGGTCAATTGGCTGTGAGCGTCCAGGAGAGCGGAAACGGTCAGTGGACTGAAGAAGAGTACGGCCGCGCGCAAACCAGCAGCGTCTCACCGAGAGGCGGCGGTTACTGCTCGAGCGCATCCACGCCGCATTCATCCAACGGTGGCGGCTCctatggtggcggcggcggtaatATGAACGGCTACGGAGGCGCAACACCGACCAGTACATCCACGCAACTCGCCAACATGTTGCCAGGCTCACCCTCCGCCGGCGGACTCTTCAACTCAACTCCACTTGCACCGGAAGCtgttcataattattttggcGCGCACCATCACACGACAACAACGACGGCAATGACGACGACCACAAGCAGCGGAGGCAGCGCGTCGGAGAAAGAGAAGAGCGCGTTCGCGCCGGTGATAAGGGGTAGCCCGCCACCGCCAACACCGATACAGCTTGCACACCAacaccaccatcaccaccaccatcatacACCCGCACCCGCGCTTTTCCACCACCAGCCCGTCACTGGCTGGCATCACTTGGCCGTGCAGTGTTAG
Protein Sequence
MQPTVPDQSGIGVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDQEADGQKTNNGIQYRLQLLYANGVRQEQDIFVRLIDSVTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVTVDGPLLAISDNMFVHNNSKHGRRAKRLDPAEGSYVNSLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYTMPRNNQLSLSAPRSPTMGNNGMASSFNTYTGQLAVSVQESGNGQWTEEEYGRAQTSSVSPRGGGYCSSASTPHSSNGGGSYGGGGGNMNGYGGATPTSTSTQLANMLPGSPSAGGLFNSTPLAPEAVHNYFGAHHHTTTTTAMTTTTSSGGSASEKEKSAFAPVIRGSPPPPTPIQLAHQHHHHHHHHTPAPALFHHQPVTGWHHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2