Basic Information

Gene Symbol
Zbtb41
Assembly
GCA_010883055.1
Location
NC:116346304-116369332[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 3.3 1.3e+02 3.0 0.4 1 8 155 162 155 165 0.89
2 14 0.12 4.6 7.6 0.1 1 23 196 218 196 218 0.97
3 14 0.52 20 5.5 0.9 2 21 224 243 223 244 0.92
4 14 0.00024 0.0093 16.0 0.8 2 23 248 269 248 269 0.97
5 14 0.19 7.4 6.9 0.3 1 23 453 476 453 476 0.94
6 14 1 40 4.6 5.9 1 23 510 532 510 533 0.96
7 14 0.00062 0.024 14.7 1.9 1 20 533 552 533 554 0.92
8 14 2.7e-05 0.001 19.0 0.9 2 23 560 581 559 581 0.96
9 14 0.001 0.04 14.1 1.9 3 23 585 606 584 606 0.95
10 14 0.12 4.9 7.5 1.6 3 23 611 632 610 632 0.95
11 14 0.0038 0.15 12.2 0.4 1 23 639 661 639 661 0.98
12 14 0.014 0.53 10.5 2.9 1 19 667 685 667 688 0.91
13 14 0.0062 0.24 11.6 3.1 1 23 698 720 698 720 0.97
14 14 0.00027 0.011 15.8 2.2 1 23 1159 1181 1159 1181 0.98

Sequence Information

Coding Sequence
ATGTATAAggaaatcacaaaaaatATTTCCGACATCATGAATGATATTGAAGAAATGGAAGACATgattgaaatagaaaatattaaacaagaaCCTCAGTTAAaggaagaaattgaaaatattaaacaagaaCCTGTGCTAAAGGAAGATATAGACTTGTCATGCAATGAAGAACTTGATTATCTTTCTCTTGAAAAATTGTGTAACGCTGATCTTAAAGCAAGTAATTTAAAAACCACTACAATTGAGACGTTCTCATTAAGTATAGACAATAAATCTGAAAATAGTAATCGAGACAATTGTATACTGCTGACGAAAAATCCTTTGTGCGATATACAAATTGCAAATATCAGCTACACCAGGAACACAAATATCTGCGACGTAAGCAATATAGAATTACAGGAAGCATACAGGATAATGGAGGATGAATCTGGTCCTGAAAATGCGATTGATAGTATTTTGTTTCAATGCGAGGACTGCAATAAACCAGCAAAATGTCTCGCAGATCATACTTATACGAAACCGAGCAATCGACTAAAATTAGTTGTggaaaatgaagaaaagaaaGACATTGATGATCAAGTTTATACATGTAAATTCTGTCCAATCGTTGTTGACAATCCACAGAAGTATTTGTTACATTTACAGGCACATGAATCGGAAGACTGCACCTGTCGATCTTGCCATGAGAATCTTAAAGTTTCTGACTTATTGAACGTACATATGCTCATAAAATTTCGTACTTGCGAGATTTGCAGAAAAGTATTCACGAGCGAAAGAGGTTATAGACagcatttaaaaatccattatcaGGTGCCAAAGAACAGTCCTgttacaaagaaaaatttagatttaagtgTCCAGACTGTGAGATTTGAGGAAATCACGATAAAGGAAGAAGATCATGGAATTGATCCTGAAGTGGAAGCGTTCGGAAATAATAAGGAAATCCTGCCAAATAGAGAAGATAGTGAAAACGTTACAGAAGGGCCTGAAACTTCTGACAAAAATGGGACAATCAATAATGAAGTAGATCCTGGTGGAAGTGGTGAAAAAGATTCTGAATCTTGTCAACCATCTTTCTCGCGATATGTGAAAAGTTGGAATAATACAGATAGAGAAAAAATCTTTccagaaaatattatattgaaaaatgatgaTGTGTGGACAAACAAAGAGAGTTCTGCAAAAAATGAGAGAAACGAAGATGCTGCTCCAACACTATCCACCGAAGATATCctcgaaattcaagaaattcatgtgGTGAAACCTTCGAAAGGACTCGATCAACCTAAAATATCAAATCCATTTGAAGGAGCAATTCCACGCCATAAAATAGAAGAGGTAATATTTCTCTTCGAGTGTGCAGGATGCGCTCGAAATTTCGTgagcaaaaaatcaattttagaacACGTGACTAAAAAGCACACCGAGGACTTTAGACTGTGGGAAACTTTATACATAAAAAAGAAGTTAGCCGacaaaaaacctatgcaaactctAACTGCGAACGAAGGAGAAGTCAAATACACTTGCAGATTTTGTCCTGCGAAATTCCACAGCGCGTGTAAGTACTCCAACCATTTAAAAATACACCACATCTGCAATCACTGCGATAAAATATTCTCAAGTCAACAGCTCCTTGAGGATCACAAATGCGAGTTTCCAAAATCCCTAATTTGTCATATTTGCAATAAACCATTCgcttttaagaataattatataGCACATTTAAACACACACGAAAATGATTGCGAGATATGCAAACAGAAATTCACCTCTGAGTCTTTGTTAACAATACACAGAAAACACGTTCATCCTGAAGGAATATGTTTCGTTTGTCATAGATGGTTTAGTTCAGAATCGCTTTTACAAGAACATAGGACAAGGTTACATGATATCTCCGTAATGAATTTCACTTGTTGGATTTGTGAAAAGAATATTCGTTCAGAGAGAAAATTTCGCGCCCACATGGAGGTACACGGAGATAAACGTCCATTCTCTTGTCATCATTGCGGGAAATGTTATGCTCGGTATTTGGCAATGACAGCACACAGTGAAAGATGTGACTTATTCGACGAAAGAAAAGTCTTCGAGTGCGATATTTGTAAGAAAGCCTTTTATGATAAGAAGAAGTTTGTTCCTCATATGAAACACCATTTTGAGAGTGACGAAATGCCGCCGCCAGAGAAACTTAGCGTTGAAGATCAAAAAATTCTGAAGCTTATAAACGATATGAAGAATACGAAGGGTTCAAAGAATTCTAGATCACCTCCAAATAATGTGCTTTATGCTCCCACATTAAATGCTGATGGCAATTTGAAACGCTTGTCCGTCGGTCCGAAGATTGTTTGGCGCGAGAGCTCACTTCAGACCAACATGCTGCCCAGTAAGATTGAACAAAAACGCGAAAAGGAGCGCCAACGAAAACACCAAAGACAAAGGGAAAGAGAACACCTTAGGTGCCTAAATTTAATGAATCCTCCTCAAACCACTTACTCTAGAATAAAAAAGGTAGTAGATTCTGATGTAAATTCAACGACTGAGCTATAtctgacaaataataaaatagtagttaataatttggaaattaataatgaaatcatgtttaaaaatatatgtgaGCCTAATAAAAAGAAGCTGGATAAAAAGTTGGGCCCCGTCAAGGTACAAGGTCGGTCTTTACTTAGGCCTAGAATTTTAGGTCGTGTTTCTGGAACGAAGTTTGAAAGATCGAAAGGAATTGATCTGATGGAAATTAAAGAGTCGGAGAAGAGTATATTCGCAGTTGGTAAAAAAAGACCAGTTCGGTACAGCTTTCAGGAAGAACCAGGAGAGAAACTTTTGATATTGAGGCCGATCAAGAAAGTGTTTACGAGAAAAGGTAAAATCGAGAAAAGTGAAAGGAAAAATACAAGGTTAAATATAGTAAGTTCActaccaaattttcaaaacgaaacaaAAGAAGGTGCTTCAATGCTTAACTTGCTACCAGCGAGGAGTGAAATAGATCCATTGCATTTGGAGGATCCGCCAGGAGATGTTGTGAGTGAAATTGTAAATCCACCATCCGATGATGAATCTGATCCACTGGCTTTAGAAAACCCGCCAATGGATGctgaaactaaaatgataaattcattAACAGAGAATGATGAATGTGATCCGCTAGCTTTCGAGAATTCTTCCATGGACTTATCAGCGGATGCTTCTGAACTAATAACAATCGATTCTGAAACTAGCGATTCTGAAACTAGCGATTCTGAAACTAGCGATTCTGAAACTAAATATTCTGAAGAATCTGTAAAGACTCGTGCAAATGCATATCTTTCGAAATTACGCCCAGCTAGACGAAAAACGTATAATTCTAATAAAACTGTTGAACCAAACAAAAGAGAATTAGACAAGAAGAAAGAAGATTTATCGCTTTTGAGAGTTAAGCATACGAAAATTCATGATGAAGGTTTGAAGACTTTTGAGTGCACCATATGTGATAAGAAATTTAATACCTATATGGGTAAAATGAGACATTTAAAGACTCACATGAAGAAGTGA
Protein Sequence
MYKEITKNISDIMNDIEEMEDMIEIENIKQEPQLKEEIENIKQEPVLKEDIDLSCNEELDYLSLEKLCNADLKASNLKTTTIETFSLSIDNKSENSNRDNCILLTKNPLCDIQIANISYTRNTNICDVSNIELQEAYRIMEDESGPENAIDSILFQCEDCNKPAKCLADHTYTKPSNRLKLVVENEEKKDIDDQVYTCKFCPIVVDNPQKYLLHLQAHESEDCTCRSCHENLKVSDLLNVHMLIKFRTCEICRKVFTSERGYRQHLKIHYQVPKNSPVTKKNLDLSVQTVRFEEITIKEEDHGIDPEVEAFGNNKEILPNREDSENVTEGPETSDKNGTINNEVDPGGSGEKDSESCQPSFSRYVKSWNNTDREKIFPENIILKNDDVWTNKESSAKNERNEDAAPTLSTEDILEIQEIHVVKPSKGLDQPKISNPFEGAIPRHKIEEVIFLFECAGCARNFVSKKSILEHVTKKHTEDFRLWETLYIKKKLADKKPMQTLTANEGEVKYTCRFCPAKFHSACKYSNHLKIHHICNHCDKIFSSQQLLEDHKCEFPKSLICHICNKPFAFKNNYIAHLNTHENDCEICKQKFTSESLLTIHRKHVHPEGICFVCHRWFSSESLLQEHRTRLHDISVMNFTCWICEKNIRSERKFRAHMEVHGDKRPFSCHHCGKCYARYLAMTAHSERCDLFDERKVFECDICKKAFYDKKKFVPHMKHHFESDEMPPPEKLSVEDQKILKLINDMKNTKGSKNSRSPPNNVLYAPTLNADGNLKRLSVGPKIVWRESSLQTNMLPSKIEQKREKERQRKHQRQREREHLRCLNLMNPPQTTYSRIKKVVDSDVNSTTELYLTNNKIVVNNLEINNEIMFKNICEPNKKKLDKKLGPVKVQGRSLLRPRILGRVSGTKFERSKGIDLMEIKESEKSIFAVGKKRPVRYSFQEEPGEKLLILRPIKKVFTRKGKIEKSERKNTRLNIVSSLPNFQNETKEGASMLNLLPARSEIDPLHLEDPPGDVVSEIVNPPSDDESDPLALENPPMDAETKMINSLTENDECDPLAFENSSMDLSADASELITIDSETSDSETSDSETSDSETKYSEESVKTRANAYLSKLRPARRKTYNSNKTVEPNKRELDKKKEDLSLLRVKHTKIHDEGLKTFECTICDKKFNTYMGKMRHLKTHMKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00011460;
90% Identity
-
80% Identity
-