Basic Information

Insect: Acraspis erinacei
Gene Symbol: -
Assembly: GCA_035041075.1
Location: JAWWLR010000128.1:16068753-16099155[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.8 7.2e+02 3.4 0.2 1 9 226 234 226 239 0.89

2 13 0.014 5.4 10.1 0.2 1 23 267 289 267 289 0.99

3 13 0.11 44 7.2 0.5 2 21 295 314 294 315 0.93

4 13 0.0014 0.57 13.1 0.7 2 23 319 340 319 340 0.97

5 13 0.2 80 6.4 0.2 1 23 522 545 522 545 0.94

6 13 0.01 4.1 10.4 3.4 1 23 578 600 578 601 0.96

7 13 0.00055 0.22 14.4 2.2 1 20 601 620 601 622 0.93

8 13 2e-05 0.0081 18.9 1.0 2 23 628 649 627 649 0.96

9 13 0.0016 0.62 13.0 1.8 3 23 653 674 652 674 0.95

10 13 0.11 46 7.1 1.9 3 23 679 700 678 700 0.94

11 13 0.0097 3.8 10.5 0.5 1 23 707 729 707 729 0.97

12 13 0.012 4.8 10.2 1.3 1 19 735 753 735 756 0.91

13 13 0.0044 1.7 11.6 3.1 1 23 766 788 766 788 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.8	7.2e+02	3.4	0.2	1	9	226	234	226	239	0.89
2	13	0.014	5.4	10.1	0.2	1	23	267	289	267	289	0.99
3	13	0.11	44	7.2	0.5	2	21	295	314	294	315	0.93
4	13	0.0014	0.57	13.1	0.7	2	23	319	340	319	340	0.97
5	13	0.2	80	6.4	0.2	1	23	522	545	522	545	0.94
6	13	0.01	4.1	10.4	3.4	1	23	578	600	578	601	0.96
7	13	0.00055	0.22	14.4	2.2	1	20	601	620	601	622	0.93
8	13	2e-05	0.0081	18.9	1.0	2	23	628	649	627	649	0.96
9	13	0.0016	0.62	13.0	1.8	3	23	653	674	652	674	0.95
10	13	0.11	46	7.1	1.9	3	23	679	700	678	700	0.94
11	13	0.0097	3.8	10.5	0.5	1	23	707	729	707	729	0.97
12	13	0.012	4.8	10.2	1.3	1	19	735	753	735	756	0.91
13	13	0.0044	1.7	11.6	3.1	1	23	766	788	766	788	0.97

Sequence Information

Coding Sequence: ATGCACATCCATGCATCAGATTCGTTGAGAAAAATCTCAACCGGGAACAATTTTGCTCAGCAAGATCAGGACAGTATACATCCGCTTGCTACTTCTAGACGTCAAACACCACCAACTCAGTCATATAATTCAGCTTCAATAGCAAATCAAGCTCTGAATTTAGATGGACAGCATTCTACTTCTGCTGGATCCTTTCATCAACATAGTTCAGCAGGAGTATCAGGTTTTAGGAATCAATTCAATGTTAATCATGGGATTCCTCCTCAATCTGGTTCGTCTTCAAGGATGATCCAAGATAATCAAATTCAACACCAAAACTTAGGATACAACCAAGGACTCGCAGGgcatcattttcaacattttcgcaGCAAGAGAGGACCTTCAACTCCACCAGTTATTTATACTTCTCCCCAccttgtttttgatttaaagaacaATCAGCTGGTAACTAAGGCTGGTGAGCCAGTAACGGAGCCTTCTGAACCACCGCGAGGACGAAAAAACAAGCAACCAGAAGGTTATCCTCTTGGTGAACAGGGTATAGGATACATTGGCGACTCTGCAGGCCATTTCTGGAACACAAATATCTGCCACGTAAGCAATATAGAATTACAGAAAGAATACAGGATAATACAGGATGAATCGTGTCCTGAAAATGCGATTGACAGTATTTTGTTTCAATGCGAGGACTGCAATAAACCAGCAAAATTTCTCGAAGATCACACTTATACGAAACCGAGCAATCGACTAAAATTAGTTGTGGAAAACGAAGAAAAGAAAGACGTTGATGATCAAGTTTACACATGTAAATTCTGTCCAATCGTGGTTGACAATCCACAGAAATATTTGTTACATTTACAGACACATGAATCTGAAGACTGCACCTGTCGTACCTGCCAGGAGAAACTTAAAGTATCTGACTTATTGAACGTACATATGCTAATAAAATTTCGTACTTGCGAGATTTGCAGAAAAGTATTCATGAGCGAAAGAGGTTATAGACagcatttaaaaatccattatcaGGTGCCAAAGAACAATCCTgctacaaagaaaaatttaagtgtCCAGACTGTGAGATTTGAGGAAATCACAATAAAGGAAGAAGATCATGGAATTGATCCGGAAGCAAAAACGTTCGCAAATAATAAGGAAGTACTGTCAAATAGAGAAGATAGTGAAAACGTTATAGAAGGTCCTGAAACTTCTGTCAAAAATGGGGAAATCAGTAATGAAGTAGATCCTGGTGAAAGTGGTAAAAAAGATACTGAATCTTGTCAAACATCTTTCTCGGGATATgtgaaaaattcgagaaatacAGATAGAGAAAATATCATTCTagaaaatatgatattaaaaaatgatgaagtgCAGACAAACAAAGAGAGTTCTGCAAAAAATGAGAgaaacGAAGATCCTGCTCCAACACCATCCACCGAAGAAATCctcgaaattcaagaaattcatctaGTGAAACCTTCGAAAGGACTATATCAACCTAAAATACCAAATTCATTTGAAGGAGCAACTCCACGCAATAAAATAGAAGAGGTAATATTTCTCTTCGAGTGTGCAGGCTGCGCTCGAAATTTCGTGAGCAAAAAAGCAATTTTAGAACACGTGACCAAAAAGCATACCGAGGAATTTAGACTGTGGGAGACTCTATACATAAAAAAGAAGTTAGCCGAAAAAAGACCGATACAAACGCTAACAGCGAACGAAGAAGTGAAATACACTTGCAGATTTTGTCCTGCGAAATTCCACAACGCATCTAAGTACTCGAACCATTTAAAAATACACCACAACTGCAATCACTGCGATAAAATATTCTCAAGCCAACAGCTCCTTGAGGATCACAAATGCGAGTTTCCAAAATCTCTAATCTGTCATATTTGCAATAAACCCTTcgtttttaagaataattatataGCACATTTAAACACACACGAAAATGATTGCGAAATATGCAAGCAGCAATTCAAATCTGAGTCCTTGTTAACAATACACAGAAAACACGTTCATCCCGAAGGAATGTGTTTAGTTTGTCATAGATGGTTTAGTTCAGAATCACTTTTAAAAGAACATAGGACAAGGTTACATGATATTTCCGTAATGAATTTCTTTTGTTGGATCTGTGAAAAGAATATCCGTTCAGAGAGAAAATTTCGCGCCCACATGGAGGTACACGGAGATAAACGTCCTTTCTCCTGTCATCATTGCGGGAAATTTTATGCGCGGTATTTGGCAATGACAGCGCATAGTGAAAGATGTGACTTATTCGACGAAAGAAAAGTCTTCGAGTGCGATATTTGTAAGAAAGCCTTTTATGATAAGAAGAAATTTGTTCCTCATATGAAGCACCATTTTGAGAGTCATGAAATGCCGCCGACAGAGAAACTTAGcgtagaagataaaaaaattctgaggCTTATAAACGATATGAAGAATACAAATGGTTCAAGGAATTCTAGATCACCTTCAAATAAGGGGCTCTCCCCGCCCCCTTTGAATACCGATAGCAATTTGAAACGCTTGTCCGTCGGTCCGAAGATTGTTTGGCGCGAGAGCTCACTACAGACCAACATGTTGCCTAGTAAGATTGAACAAAAACGCGAAAGGGAGCGCCAACGAAAACACCAAAGACAAAGGGAAAGAGATCACCTTAGGagcttaaatttaataaatcctcCTCAGAAAACATACTCTAGAATAAGAAAGGTACTAGATTCTGACGTAAATTCAACAACTGAGGTACAAGGTCGGTCTTTACTTAGGCCTAGAATTTTAGGTCGTATTTCTGGAACGAAGTTTGAGAGATCGAAAGGAATTGATCCAGAGGACATTAAAGAGTCAGAGAAGAGTATATTCGCAGTTGGTAAAAAAAGACCAGTCCGATACAGTTTTCAGGAAGAATCAGGAGAGAAACTTTTGATATTGAGGCCGATCAATAAAGTGTTTACAAGAAAAGGTCTAATTCAGAAAAGTGAAAGGAAAAATACAAGGATAAATAGAGTAAGTTCACTgccgaattttcaaaccgaaacaAAAGAAGGTGATTCAATGCTTAACTTGCTACTAATGAGGAGTGAAATCGATCCATTGCAATTGGAGGACCCGCCAGTAGATGCTGCGAGTGAAATTGTAAATCCACCATCCGATGGTGAATGTGATCCACTGGCTTTAGAAAACCCGCCAATGGATTctgaaactaaaatgataaattcatcAACAGAGAATGATGAATCTGATCCGCTAGCTTTCGAGAACTCTTCCATGGACTTAACTGCTGAAGCTTCTGAACTAATAACAATCGATTCTGAAACTAGCGATGCTGAAACTAAAAATTCTGATGAATCTCTAGAGGAATGCTCGGAGCAGATTCACGTCGCGGGACTGCACCAACATTTTTGCAGCTCAAATTCCTTCAGATCCACTAAAATTCGTCGCCGCTTGCCCTCCGAACACTCTGTGGTACATTACAATTAG
Protein Sequence: MHIHASDSLRKISTGNNFAQQDQDSIHPLATSRRQTPPTQSYNSASIANQALNLDGQHSTSAGSFHQHSSAGVSGFRNQFNVNHGIPPQSGSSSRMIQDNQIQHQNLGYNQGLAGHHFQHFRSKRGPSTPPVIYTSPHLVFDLKNNQLVTKAGEPVTEPSEPPRGRKNKQPEGYPLGEQGIGYIGDSAGHFWNTNICHVSNIELQKEYRIIQDESCPENAIDSILFQCEDCNKPAKFLEDHTYTKPSNRLKLVVENEEKKDVDDQVYTCKFCPIVVDNPQKYLLHLQTHESEDCTCRTCQEKLKVSDLLNVHMLIKFRTCEICRKVFMSERGYRQHLKIHYQVPKNNPATKKNLSVQTVRFEEITIKEEDHGIDPEAKTFANNKEVLSNREDSENVIEGPETSVKNGEISNEVDPGESGKKDTESCQTSFSGYVKNSRNTDRENIILENMILKNDEVQTNKESSAKNERNEDPAPTPSTEEILEIQEIHLVKPSKGLYQPKIPNSFEGATPRNKIEEVIFLFECAGCARNFVSKKAILEHVTKKHTEEFRLWETLYIKKKLAEKRPIQTLTANEEVKYTCRFCPAKFHNASKYSNHLKIHHNCNHCDKIFSSQQLLEDHKCEFPKSLICHICNKPFVFKNNYIAHLNTHENDCEICKQQFKSESLLTIHRKHVHPEGMCLVCHRWFSSESLLKEHRTRLHDISVMNFFCWICEKNIRSERKFRAHMEVHGDKRPFSCHHCGKFYARYLAMTAHSERCDLFDERKVFECDICKKAFYDKKKFVPHMKHHFESHEMPPTEKLSVEDKKILRLINDMKNTNGSRNSRSPSNKGLSPPPLNTDSNLKRLSVGPKIVWRESSLQTNMLPSKIEQKRERERQRKHQRQRERDHLRSLNLINPPQKTYSRIRKVLDSDVNSTTEVQGRSLLRPRILGRISGTKFERSKGIDPEDIKESEKSIFAVGKKRPVRYSFQEESGEKLLILRPINKVFTRKGLIQKSERKNTRINRVSSLPNFQTETKEGDSMLNLLLMRSEIDPLQLEDPPVDAASEIVNPPSDGECDPLALENPPMDSETKMINSSTENDESDPLAFENSSMDLTAEASELITIDSETSDAETKNSDESLEECSEQIHVAGLHQHFCSSNSFRSTKIRRRLPSEHSVVHYN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00201055;
90% Identity: -
80% Identity: -