Btre012673.1
Basic Information
- Insect
- Belonocnema treatae
- Gene Symbol
- -
- Assembly
- GCA_010883055.1
- Location
- NC:9999819-10034081[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 6.8 2.6e+02 2.0 0.6 2 23 744 765 743 765 0.91 2 17 2.7 1e+02 3.3 0.5 1 19 771 789 771 790 0.80 3 17 0.68 26 5.2 0.9 2 23 798 819 797 819 0.95 4 17 0.00054 0.021 14.9 1.7 3 23 828 849 827 849 0.97 5 17 0.0046 0.18 12.0 2.1 1 23 856 879 856 879 0.95 6 17 0.00019 0.0073 16.4 0.8 1 23 885 908 885 908 0.94 7 17 3.2 1.3e+02 3.0 1.1 2 23 916 936 915 936 0.87 8 17 1.2e-06 4.6e-05 23.3 2.6 2 23 942 963 941 963 0.97 9 17 1e-05 0.00041 20.3 0.3 1 23 969 991 969 991 0.98 10 17 0.00059 0.023 14.8 1.5 2 23 1003 1025 1002 1025 0.95 11 17 0.029 1.2 9.4 1.5 1 23 1031 1054 1031 1054 0.94 12 17 0.037 1.4 9.1 4.3 3 23 1077 1098 1075 1098 0.93 13 17 0.00041 0.016 15.3 1.1 2 23 1105 1127 1104 1127 0.96 14 17 4.3e-05 0.0017 18.4 1.6 2 23 1135 1156 1134 1156 0.97 15 17 0.0018 0.072 13.2 2.3 1 23 1162 1185 1162 1185 0.96 16 17 1.9 74 3.8 5.2 2 23 1192 1213 1191 1213 0.96 17 17 0.043 1.7 8.9 3.0 1 23 1219 1241 1219 1241 0.98
Sequence Information
- Coding Sequence
- atgaatgtttccaatacttataaaaaattcaaacgttttgtgGTGGAAAGTGGcaaatcttttgatattccttcaaaaataaacaatagtgGTGGTGTTTTGAGAAAATCCACGGATTTTAAGtgtcagaaaattgaaaaagatacgcGGAAAAGCGAGAAACTTCTTCTACGAGAAGTGACACCTGGAAAGAATAATGCTTCGTTTTCGGAAAACCAGTTGTCCTTGTGTTCGGAAACTGATATTCAACCGATAGCACTTTTTGAGGAAGCGAAATTAGAAAAGTCGGAACAGAATTATGCTTTTGagaCTACAAAATTACAATCTGAACAAGACGtaattacaattttagaaaacCGAGACCACAACTACGGAGTCAAAATGAACAATCGGTCCGCAGACAACCGAATTGCTTCTCCAAAAATCTCTCAATTTCACAATTACTCTTATCCCTCACCGTCGCAAAAAGATCAAACCCCGAATCAAATAACAAatataagagatttaaaaaaaaacaccccCCGAGTTAAACTCCTGAACCAGGAATCTCCGACTCTTCAaccattaaaaaaagtaaattcccCCCAAATGAGAGTCGATCCAACTCCCGAGGATTCGATGAAAAAAGAACTGAAGAAATATTGTCGAACCTGCGCCGGAATAAAGCTGCCCCTCACTGATATTTTCAGCGAAAAGGGAATTCAGATGAAGCTCAGCCAGCAAATTAGACACCTAGAAAATATCAAAGAAACCGATTCCCTGTCCACACAAATGTGCATGGACTGCATTTGTGACCTAAAAATGAGTTACACCTTTTTCATGCAGATTAAGAAAGCCGAGAATAAATTGAAATCAATCCAGGCGAAATTGCTCGAAACTGCAAAAGCGAATTGGAAAGTTCAAGAGGAGGCAACGAAAATGAATCATCCTTTAATTCAGCATGATCCTGCCAATTTGAAGAATAATGGCCCTCGAATTTCGGCCGTATTTTCCACCAAAGATTCGCCCAACTGGGAAACGGATCCAGTTCCAAAAGTCAAGTGCGAACCTGGAGTTTCGGAGGCTGAGGAATTTGAGAAAGTCCAGGAGGTGGAGAAAGTTCAGGAGGCTCAAAAAGTGCAGAAGGTTCCGAGTGATAACGAATCTTTGGAAGAATTTGATCCCGACGATCCTCCCTTTCATCCGCCGAGTGGAGAAGAAAATGCAGAAGGTGAGCCGAAACTTGTAAATCCTGTGAAGAAGGATCCAAAAAAAGGAACTGCAACTTCTGCCCTCAAATTGGATAAGAGCACGAAAGCGGATAAGGAGATGGAGATGAAAGAGGAGAATTTAAAGCGGAAATTGTCCGAGGGTAATGATGACAAATTGTCAATGTTGAAAGCGATTGGACCCAAAGAAGCGAAATTAcgaaagctgaatgtaaatgagGCATTGAATATCAAAAAAGAGGAGAACGGAGTCATGTATGTGACGGTGCGTGGCGCAAAACCCAATGAACTGCTTCTGGTGAAGGTGAAAAAAATGGAGAAGGGCGAGAAGAGTAAATCTGCATGCAAGAAAGAGAGTCTCAAGGAGAAGGAAAATCCATTTGTGGATCGATCCCTGGAACAGAAGGGACAGATAATAGAGGAGCAGATCGAGGAATACAAAAAGAAGAGGGAGAAAGTTCTGGGACCCTCAGCCCAGAATGACACGACCGTGATAATGCCTGAAGATGTTCGAGTCAAGAAGGAGACTTTTTACATCAAGGGAAGAGAAGTGCAGTCTGATGAATTTCATCAACATATACCcctagaaatttcaaataagaaggaACTGCTGAAAGAAGTGTTGGAGATTAAGAAAGAGAAGCCGGAGAAAAGTGGGAAGATTGTGAAGAATAAGGAGCCGAAGCCAAAAGTTTACAACAATCCCGAGGATTATAATTTGCGGATTGAGACAGTGAAGAATAAATGGGAGGATAAGCAGCGAAAGGATTGGGAGGAGGCACATCCGGGAATTGAGAATCCGGTCGATCGGTTGAAACGAATTTTGGGTGACTTGAGCGAGGGCGAGAATCTCCaggaatttattgaaaatctgcAGCAGCGAAAAATGGTGATTGCCAAATTGTGCGATGACGATATCGTCGCTTTTTTCAAGGACCGAATCAACGCCCGGAAACTAGTCTCCGAGCCGGAGTCTTCCGACCTTGAGGAGAAAATCGAAGTGCCTTTTCTTGACTTGATTGAGTGTGATTTTTGCTTTCTCGCATTCGCGACCAAGGAGGTGTGCGACGAGCACATGAAAATTCACGACAAGCGAATTCTCCATTATTGTGAGGATTGTAACGAGGAGTTTCCGGTGCTGAGACTGAAGAAAAATCACAATGTGATTTGCATCAGGAAATTGATTTGCAAGTATTGTGACTTGATGTTGGACTCGAAGGGCAAGAAGCGACAGCACGAGCAGAAGCACTGCGACAATATTCATGGACAACTCTGCGAGTACTGTGGCGAGAAGTTCAAGCATCAGGGCACCTTGGATCAGCATGTGAAGTCGCGACACATGAGTCTGGAGAAGATTTTTCAGTGTCCAAAGTGTccgaaaaaatttgcttttaaaacgAAATTGAGCTTTCATTTGAAGAGTGTGCACACGGCATTGCGGGCCTTTTTGTGCGAGGATTGCGGAGCGGATTTTAAAAATCCGGCGAGTTTGCGACATCACAGGATAAGGAAGCATCAGCCGAGTGGAAATAAGAAGGAATGCCCGGTTTGCAGGAAGCTGATACCGCTTTATAGTTTGAGCAAACACATGCACACGCATAAGGCTTATACGATCAAGTGTCCGCACTGcgacaaaatgtttaaaaatacgtcGACGTTGAAGCAGCATGTGAGAATTCATGAGGATCAGAGACAGTTCAGGTGCGACACTTGCGGAGTTGGATTCAACCGACGAGACGGTCTTCGTCTCCACATGAAGGTCCACGAAAAGTCGGACAGTCGCGGGCTCAAGGAATGCGCCTGTCAAATATGTGGCGAGAAATTCCCGAATCACTCGATGCTCGTCATCCATCGCAATCGTGTTCACAAAGACGGAAGAAATTACACCTGTCACATTTGCAACAGATCGATGATTTCCACACGATCTCTCGAGTGGCATTTGGCTCACATTCACAACGAGTCGCTGCCGGGCATCATCAAGGAGGAGTCGGACGGTTCCGGCGAAACGAAACGCGTCTGCTGCTTCCACTGCGACAAGACTTTCAAAACCGAGATGATTCTGAGGACGCATATAAAAAATGCCCATATGGAGAAGGAGCCGGTCAAGTGTCTCGACTGCGATTTGACGTTCACGAGTGAAGTTCGACTCCGCCATCATATGATGGTAACGCACAATCGACTTGAGGGCACTCTCCAGTGTCCCCATTGTCCGAAGAGATTTGTCAATCAGTTGAGACTGAAGACGCACATGATTTCGCACTCGGAGGAGCGACCCTACACGTGCGAGATTTGCGGATTTAATCTCAAGACGAAGATTCAGTTGATCAAGCATCATCAGAATCGGCACAGCGACGAGCGACCTTTGCAGTGTCGACACTGTCCTTGGAGATGTAAACAGGTGAGTGCGCTCGTTTGCCATGAGAGGACTCACACGAACGAGCGTCCTTATTTCTGCAGCGTCTGCAGGCAAAGATTCAAGTACCTGGGTGATAAAAATAAGCACGAGAGACGCCATGAAGCGCTTGGAGGTGccggatttaaaagaattattacaaCGAGAGGAGGGACAAAACGATCGGGACGTAAGGAAGAGGGCAACGGGGATACTTCGAATTCCGAGCAGGATCAAATCGAGGAACAAATGGAGGAAGAATTGGAAATGGAATCGAGGCTTGTGGACTACGAGGTTGACGACGAGAATGTTAAACTTGAGCAACACGAGGAAGGCACAGAAGACGACAATGAGTACTCTAATTACCAGCAGGATTACGAAGAAACTTCGAGAGAAGCGTCGGATGCGACGGAGGTGATGATGAGCATGGAAGATACGGCGGTTTATACAGAAGAAGTAACAGCAGAAAATGCAGAAACTATCGAGACAACACACATAATTGAGGACGAAATAATGGCAAACGAAATTCTCCAATCAGGAACCGTCGTTCATATTGAACAGCATGACGAGGAGGGAAAAATCCAGGTTATTCCTGTCGTTCTTTCACTTCCTGATTTAACTGGAGAAAATTCGGAAGTTAATCTGGCAACAGCTTCTATAATGTATAATAACGAAGAGTGTAATTAA
- Protein Sequence
- MNVSNTYKKFKRFVVESGKSFDIPSKINNSGGVLRKSTDFKCQKIEKDTRKSEKLLLREVTPGKNNASFSENQLSLCSETDIQPIALFEEAKLEKSEQNYAFETTKLQSEQDVITILENRDHNYGVKMNNRSADNRIASPKISQFHNYSYPSPSQKDQTPNQITNIRDLKKNTPRVKLLNQESPTLQPLKKVNSPQMRVDPTPEDSMKKELKKYCRTCAGIKLPLTDIFSEKGIQMKLSQQIRHLENIKETDSLSTQMCMDCICDLKMSYTFFMQIKKAENKLKSIQAKLLETAKANWKVQEEATKMNHPLIQHDPANLKNNGPRISAVFSTKDSPNWETDPVPKVKCEPGVSEAEEFEKVQEVEKVQEAQKVQKVPSDNESLEEFDPDDPPFHPPSGEENAEGEPKLVNPVKKDPKKGTATSALKLDKSTKADKEMEMKEENLKRKLSEGNDDKLSMLKAIGPKEAKLRKLNVNEALNIKKEENGVMYVTVRGAKPNELLLVKVKKMEKGEKSKSACKKESLKEKENPFVDRSLEQKGQIIEEQIEEYKKKREKVLGPSAQNDTTVIMPEDVRVKKETFYIKGREVQSDEFHQHIPLEISNKKELLKEVLEIKKEKPEKSGKIVKNKEPKPKVYNNPEDYNLRIETVKNKWEDKQRKDWEEAHPGIENPVDRLKRILGDLSEGENLQEFIENLQQRKMVIAKLCDDDIVAFFKDRINARKLVSEPESSDLEEKIEVPFLDLIECDFCFLAFATKEVCDEHMKIHDKRILHYCEDCNEEFPVLRLKKNHNVICIRKLICKYCDLMLDSKGKKRQHEQKHCDNIHGQLCEYCGEKFKHQGTLDQHVKSRHMSLEKIFQCPKCPKKFAFKTKLSFHLKSVHTALRAFLCEDCGADFKNPASLRHHRIRKHQPSGNKKECPVCRKLIPLYSLSKHMHTHKAYTIKCPHCDKMFKNTSTLKQHVRIHEDQRQFRCDTCGVGFNRRDGLRLHMKVHEKSDSRGLKECACQICGEKFPNHSMLVIHRNRVHKDGRNYTCHICNRSMISTRSLEWHLAHIHNESLPGIIKEESDGSGETKRVCCFHCDKTFKTEMILRTHIKNAHMEKEPVKCLDCDLTFTSEVRLRHHMMVTHNRLEGTLQCPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRHCPWRCKQVSALVCHERTHTNERPYFCSVCRQRFKYLGDKNKHERRHEALGGAGFKRIITTRGGTKRSGRKEEGNGDTSNSEQDQIEEQMEEELEMESRLVDYEVDDENVKLEQHEEGTEDDNEYSNYQQDYEETSREASDATEVMMSMEDTAVYTEEVTAENAETIETTHIIEDEIMANEILQSGTVVHIEQHDEEGKIQVIPVVLSLPDLTGENSEVNLATASIMYNNEECN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00011434;
- 90% Identity
- iTF_00089836;
- 80% Identity
- -