Basic Information

Gene Symbol
-
Assembly
GCA_035222095.1
Location
JAWWEA010000001.1:3087208-3113778[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 5.6 1.7e+03 2.0 0.6 2 23 773 794 772 794 0.91
2 17 0.91 2.8e+02 4.5 0.3 1 19 800 818 800 819 0.82
3 17 0.56 1.7e+02 5.1 0.9 2 23 827 848 826 848 0.95
4 17 0.00044 0.14 14.9 1.7 3 23 857 878 856 878 0.97
5 17 0.0037 1.1 12.0 2.1 1 23 885 908 885 908 0.95
6 17 0.00012 0.036 16.7 0.7 1 23 914 937 914 937 0.94
7 17 2.6 8e+02 3.0 1.1 2 23 945 965 944 965 0.87
8 17 9.6e-07 0.00029 23.3 2.6 2 23 971 992 970 992 0.97
9 17 8.6e-06 0.0026 20.3 0.3 1 23 998 1020 998 1020 0.98
10 17 0.00045 0.14 14.9 2.2 2 23 1032 1054 1031 1054 0.95
11 17 0.024 7.4 9.4 1.5 1 23 1060 1083 1060 1083 0.94
12 17 0.026 7.9 9.3 3.7 3 23 1106 1127 1104 1127 0.92
13 17 0.00036 0.11 15.2 1.1 2 23 1134 1156 1133 1156 0.96
14 17 3.5e-05 0.011 18.4 1.6 2 23 1164 1185 1163 1185 0.97
15 17 0.0015 0.46 13.2 2.3 1 23 1191 1214 1191 1214 0.96
16 17 1.6 4.8e+02 3.7 5.2 2 23 1221 1242 1220 1242 0.96
17 17 0.035 11 8.9 3.0 1 23 1248 1270 1248 1270 0.98

Sequence Information

Coding Sequence
ATGGATGTCGTCACAGCCTACTCAAATGTCGAGTTCGAAGAAAATGTCTTTCTGCGTATTccacaagttttgaaaaatttgatgagCAAAGTATTGTCTGGAGAAACTGTCAAATCGAGTAGGCAGCTGGATCCAGATCCTTGCATTTTGATCGCAAAAAAGCAAGATGACATTATGCTTATAGTGACTTATGTTGACGACCTGCTGATTGCAGCTGAAAATCAAAATGATATAAGTCAAATGAAATCGACATTGGCAACTCTCTTGGAGAAGAGGATTCTCGGTAGGAGAGCTGATCAGCGTACTGATGTTCTTAGCAACATCGACAAGGCCCGAACTTGCATTCACAaatcgaCAGAATCACAATTTGAACAAGACGTAATCACAGTTTTAGAAAACCGAGATCACAACTACGGACTCAAAATGAACAACCGACCCGCAGATAACCGAATTACTTCTCCAAAAATCACTCAGTTTCACAATTACTCTTCCCCCTCCCCGTCTCAAAAGGATCAATCCTTGAATCAAATAACAAACATAAGAGACCTCAAAAAAAATACCCCCCGAGTTAAGCTTTTGAACCAAGAATCTCCCACTCTTCAACCGGTCAAAAAAGTAAATTCCCCTTACTTAAAAGTCGATCTAACCCCCGAGGATTCGATGAAAAAAGAACTGAAGAAATATTGTCGAACCTGCGCCGGAATAAAACTTCCCCTCACTGATATTTTCAGCGAAAAGGGAATTCAGATGAAGCTCAGCCAGCAAATTAGACACCTAGAAAGTATCAAAGAAACCGATTCCCTTTCTACTCAAATGTGCATGGACTGCATTTGTGACCTAAAAATGAGTTACACTTTCTTCATGCAGATTAAGAAAGCCGAGAATAAATTGAAATCGATTCAGTCGAAACTAATCGAAACTGCGAAAGCGAATTCAAAAGTTCAAGAGGAGCCttccaaaattaatcttcctttaaTTCAGCACGATCCcaccaatttaaaaaacaatggtCCTCGAATTTCTGCCGTATTTTCCACTAAAGATTCCCCCAACTGGGAAATGGATCCAGTTGCAAAAGTGAAAAGCGAACCTCAAGTTCAGGAGGTTCAAGAAGAGCAGGGGGTTCAGAAAGTTCAGGAAGTTCAAAAAGTGCAAGAGGTTCAAAAAGTTCAGGAAGTTCAGAAAGTTCAGGAGGTTCAAGAGGTTAAGAAACAGGTTCAGAGTGATAACGAATCTTTGGAAGAATTTGATCCCGATGATCCTCCTTTTCATCCCGAGAGTGAAGATGAAAATACAGACGGAGAGCCGAAAGTTGTAAATCCTGTGAAGaagaatccaaaaaaaggaactaCAACTCCTGCTCCTAAATTTGATAAGAACACGAAAGCGGATAAGGAAGTAGAGATAAAAGAGGACTATTTAAAGCGGAAATTATCTGAGGGGAACGAGGATAAATTGTCAAAGCTAAAAGCGATTGGACCCAAAGACGCGAAGCTGCGAAAACTGAATGTAAATGAGgccctaaatataaaaaaagaggaGAACGGAGTCATGTATGTTACAGTGCGAGGCGCAAAACCAAACGAACTGCTTCTagtgaaagtgaaaaaaatggaaaagggcGAGAAGAGTAAAGTTGCATGCAAGAAAGAAAGTCTTAAAGAAAAGGAAAATCCATTTCTGGATCGATCTTTGGAACAGAAGGGGCAAATAATAGAAGAACAGATAGAAGAATACAAAAAGAAGAGGGAGAAAGTTCTTGGACCTTCAGCCCAAAATGATACGACAGAGTTAGCTCCTGAAGAAGTTAGAATCAAGAGGGAAACTTTTTACATAAAGGGAAGGGAAATCCAGCCTGAAgaatttcataaacatattccgatagaatttccaattaagaaggAACTACTAAAAGAAGTGGTGGAGATAAAGAAAGAGAAGCCGGAGAAAAGTCCCAAGAGTTTGAAGAATAAGGAACCGAAGCCGAAAATTTACAACAACCCCGAGGATTATAATCTGCGGATTGAGACAGTGAAAAATAAATGGGAAGATAAGCAACGGAAGGATTGGGAAGAAGCACATCCGGGAATTGAAAACCCGGTCgatagattaaaaagaattttgggaGACTTGAGTGAGGGggaaaatcttcaagaatttattgaaaatctgcAACAGAGGAAAATGGTGATTGCGAAATTGTGTGATGAAGATATCGTGTCTTTTTTCAAGGACAGAATCAACTCCCGGAAAGTTGTAGCCGAACCGGATTCGGATGTGGAGGAGAAAATAGAAGTGCCTTTTGTTGAATTAATTGAGTGTGATTTTTGCTTTCTCGCTTTTGCGACCAAAGAAGTATGCGATGAACATATGAAGATTCACGACAAGAGAATTCTCTATTATTGCGAAGATTGCAACGAGGAATTCCCCGTGCTGAGGTTGAAGAAAAATCACAATGTGATTTGTATCCGGAAATTGATTTGCAAGTATTGCGATTTGATGTTGGATTCCAAGGGGAAGAAGAGACAGCATGAGCAGAAACATTGCGACAATATTTTTGGGCAACTGTGCGAATATTGTGGCGAGAAGTTTAAACATCAGGGAACTTTGGATCAGCATGTGAAGTCGAGGCACATGACTTTGGAGAAGGTTTTTCAGTGTCCGAAATGCCCGAAgaaatttgcttttaaaacaaaactcaGTTTTCATTTGAAGAGTGTGCATACTGCTCTGAGGGCTTATTTGTGCGAGGATTGTGGAGCGGATTTTAAAAATCCAGCGAGTTTAAGACATCACAGGATCCGGAAACATCAGCCTACTGGGAATAAGAAGGAATGCCCGGTTTGTAGGAAGCTGATTCCGCTTTATAGTTTGAGCAAACATATGCATACGCATAAGGCTTATTCGATTAAGTGTCCGCATTGCGATAAGATGTTCAAGAATACGTCGACATTGAAGCAGCATGTGAGGATTCATGAGGATCAGAGACAGTTTAGgtgCGACACTTGTGGAGTTGGATTCAACCGAAGAGACGGTCTTCGTCTCCACATGAAGGTCCACCTAAAATCGGAGAGTCGGGGCGTTAAGGAATGTTCCTGCCAAATATGTGGCGAGAAATTCCCCAATCACTCTATGCTCGTCATCCATCGAAATCGAATTCACAAAGACGGAAGAAATTACACCTGCCATATTTGCAACAGGTCGATGATTTCTACTCGATCTCTCGAATGGCATTTGGCTCACATTCACAACGAGGCTCTTCCTGGAATCATCAAGGAAGAATCGGACGGTTCCGGTGAAACAAAAAGAGTCTGTTGCCTCCACTGCGACAAGACTTTTAAAACCGAAATGATTCTGCGAACACATATAAAAAATGCCCATATGGAAAAGGAGCCTGTGAAGTGTTTGGACTGCGATTTGACTTTCACAAGTGAAGTTCGACTCAGACATCATATGATGATTACTCATAACAGACTTGAAGGAACTTTGCAGTGTCCACATTGTCCGAAGAGATTTGTGAATCAATTGAGACTGAAGACGCACATGATTTCGCATTCGGAGGAACGACCTTATACGTGTGAGATTTGTGGGTTTAATCTCAAGACGAAGATTCAGTTGATTAAGCATCATCAGAATCGACACAGCGATGAGAGACCCTTGCAGTGTCGTCATTGTCCTTGGAGATGTAAACAGgTGAGTGCGCTTGTTTGCCACGAGAGGACTCACACGAACGAGCGTCCTTATTTCTGCAGCGTTTGCAGGCAAAGATTCAAGTACCTAGGTGATAAAAATAAGCACGAGAGACGCCATGAAGCTCTGGGAGGCGCCGGATTTAAGAGAATTATTACAACCAGAGGCACAAAACGATCTGGACGTAAGGACGAGGGTGAGGGAGATACTTCAAATTCCGAGCAGGATCAAATAGAGGAACAAATGGAGGAAGAAATGGAAATTGAATCAAGGCTCGTCGATTACGAGGTTGACGACGAAAATGTTAAACTTGAGGAACACGAGGAAGGCGAAGAGGACGATAATGAGTACTCTCATTACCAGCAGgaTTACGAAGAAACTTCGAGAGAAGCTTCGGATGCCACGGAGGTGATGATGAGCATGGAAGATACTGCTGTTTATACCGAAGAGGTAACCGCAGAAAATGCAGAGAATATCGAGACGACACACATAATTGAGGACGAAATTATGGCAAACGAAATCCTCCAATCAGGAACCGTCGTTCATATTGAACAGCATGACGAGGAAGGAAAAATCCAGGTTATTCCTGTCGTTCTTTCTCTTCCTGATTTAACTGGAGAAAATTCGGAAGTTAATCTCGCAACCGCTTCTATTATGTATAATAACGAAGAGTGA
Protein Sequence
MDVVTAYSNVEFEENVFLRIPQVLKNLMSKVLSGETVKSSRQLDPDPCILIAKKQDDIMLIVTYVDDLLIAAENQNDISQMKSTLATLLEKRILGRRADQRTDVLSNIDKARTCIHKSTESQFEQDVITVLENRDHNYGLKMNNRPADNRITSPKITQFHNYSSPSPSQKDQSLNQITNIRDLKKNTPRVKLLNQESPTLQPVKKVNSPYLKVDLTPEDSMKKELKKYCRTCAGIKLPLTDIFSEKGIQMKLSQQIRHLESIKETDSLSTQMCMDCICDLKMSYTFFMQIKKAENKLKSIQSKLIETAKANSKVQEEPSKINLPLIQHDPTNLKNNGPRISAVFSTKDSPNWEMDPVAKVKSEPQVQEVQEEQGVQKVQEVQKVQEVQKVQEVQKVQEVQEVKKQVQSDNESLEEFDPDDPPFHPESEDENTDGEPKVVNPVKKNPKKGTTTPAPKFDKNTKADKEVEIKEDYLKRKLSEGNEDKLSKLKAIGPKDAKLRKLNVNEALNIKKEENGVMYVTVRGAKPNELLLVKVKKMEKGEKSKVACKKESLKEKENPFLDRSLEQKGQIIEEQIEEYKKKREKVLGPSAQNDTTELAPEEVRIKRETFYIKGREIQPEEFHKHIPIEFPIKKELLKEVVEIKKEKPEKSPKSLKNKEPKPKIYNNPEDYNLRIETVKNKWEDKQRKDWEEAHPGIENPVDRLKRILGDLSEGENLQEFIENLQQRKMVIAKLCDEDIVSFFKDRINSRKVVAEPDSDVEEKIEVPFVELIECDFCFLAFATKEVCDEHMKIHDKRILYYCEDCNEEFPVLRLKKNHNVICIRKLICKYCDLMLDSKGKKRQHEQKHCDNIFGQLCEYCGEKFKHQGTLDQHVKSRHMTLEKVFQCPKCPKKFAFKTKLSFHLKSVHTALRAYLCEDCGADFKNPASLRHHRIRKHQPTGNKKECPVCRKLIPLYSLSKHMHTHKAYSIKCPHCDKMFKNTSTLKQHVRIHEDQRQFRCDTCGVGFNRRDGLRLHMKVHLKSESRGVKECSCQICGEKFPNHSMLVIHRNRIHKDGRNYTCHICNRSMISTRSLEWHLAHIHNEALPGIIKEESDGSGETKRVCCLHCDKTFKTEMILRTHIKNAHMEKEPVKCLDCDLTFTSEVRLRHHMMITHNRLEGTLQCPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRHCPWRCKQVSALVCHERTHTNERPYFCSVCRQRFKYLGDKNKHERRHEALGGAGFKRIITTRGTKRSGRKDEGEGDTSNSEQDQIEEQMEEEMEIESRLVDYEVDDENVKLEEHEEGEEDDNEYSHYQQDYEETSREASDATEVMMSMEDTAVYTEEVTAENAENIETTHIIEDEIMANEILQSGTVVHIEQHDEEGKIQVIPVVLSLPDLTGENSEVNLATASIMYNNEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00011434;
90% Identity
iTF_00201023;
80% Identity
-