Basic Information

Insect: Belonocnema treatae
Gene Symbol: PRDM10
Assembly: GCA_010883055.1
Location: NC:64206342-64256296[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00012 0.0048 16.9 0.7 2 23 486 507 485 507 0.96

2 14 1.9e-07 7.6e-06 25.8 2.8 1 23 541 563 541 563 0.98

3 14 0.00089 0.035 14.2 0.7 1 21 571 591 571 592 0.95

4 14 0.0095 0.37 11.0 0.4 2 23 620 641 619 641 0.94

5 14 0.00061 0.024 14.8 0.2 2 23 654 675 654 675 0.95

6 14 0.015 0.59 10.4 3.8 1 23 692 714 692 714 0.91

7 14 0.017 0.66 10.2 2.0 2 23 723 744 722 744 0.96

8 14 0.002 0.078 13.1 0.1 1 23 751 773 751 773 0.98

9 14 0.0016 0.063 13.4 5.1 1 23 780 802 780 803 0.96

10 14 0.0041 0.16 12.1 3.1 1 23 808 830 808 830 0.98

11 14 4.6e-06 0.00018 21.4 1.5 1 23 836 859 836 859 0.96

12 14 0.0028 0.11 12.7 1.7 1 23 892 915 892 915 0.97

13 14 0.00021 0.0083 16.2 2.4 1 23 937 960 937 960 0.97

14 14 0.0062 0.24 11.6 3.4 3 23 998 1019 998 1019 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00012	0.0048	16.9	0.7	2	23	486	507	485	507	0.96
2	14	1.9e-07	7.6e-06	25.8	2.8	1	23	541	563	541	563	0.98
3	14	0.00089	0.035	14.2	0.7	1	21	571	591	571	592	0.95
4	14	0.0095	0.37	11.0	0.4	2	23	620	641	619	641	0.94
5	14	0.00061	0.024	14.8	0.2	2	23	654	675	654	675	0.95
6	14	0.015	0.59	10.4	3.8	1	23	692	714	692	714	0.91
7	14	0.017	0.66	10.2	2.0	2	23	723	744	722	744	0.96
8	14	0.002	0.078	13.1	0.1	1	23	751	773	751	773	0.98
9	14	0.0016	0.063	13.4	5.1	1	23	780	802	780	803	0.96
10	14	0.0041	0.16	12.1	3.1	1	23	808	830	808	830	0.98
11	14	4.6e-06	0.00018	21.4	1.5	1	23	836	859	836	859	0.96
12	14	0.0028	0.11	12.7	1.7	1	23	892	915	892	915	0.97
13	14	0.00021	0.0083	16.2	2.4	1	23	937	960	937	960	0.97
14	14	0.0062	0.24	11.6	3.4	3	23	998	1019	998	1019	0.98

Sequence Information

Coding Sequence: ATGGATCCAAGGGGCCCTCCAGAGGGGGCCCCTATCGACCCCCTAGATATATCCAGCATCGAAAAAGCAACCGATGTCTCGGAAAATTGGTCAGCGGACAACATTGTTCCTTCACCTCTCTGCgagcaaccaaaaaaaatgaacaacAGATTATTGTTCTTAACGGTCGAGTATGTGGAGGACCAAACGCGAGACTACACTCGCATGTTCTCCGTTTACGAGCCCGTTTCCTATTCCCCAAGAGCTTCCTCTCCACTTTCCGAATTTGAACACCGTGTTAGTCCCCACGATCCTAACATGAGCTCAGCCGCCAGATATTCGCCAACCCCAGTTCAATTGCCGCCTTCCCCATTTCAAAATTCGGTTGTCGTCCTGCAAAATCCATCTTCGCCGTTGATTCCTGCATCGGAGACGAATGCCAGGACAAACATCAGCTTTGTGGCTCAATTGGCCGATCAGACTGCTTCTCAAAACATTCCGCAAAGCGATAACCCTGCCGATTTTGTTGACGGGAGTAGCGAGGAAAGCCTCGTTCCTGGCAATGAATTGATTCTAATGCAggGTGCGACCCCTGAATTAGAACCTTCGGCCCCTCCGTTGATGCTCACCGGCTTACCTGGTTCCGATTTCGCTCTAGCTCGCGATTTCCTTGTGATGCACGACGATCAGATCAGTGTCATGAACTCcttcaaaaatcaaaacataGAAATAAACGAGAGCTACATCCCAAGTCCAATGCAGACTGTAATTCCAAACGAAGAACTAGATTTGTGTGAGACAGGTCAGTCCAAAAAGGAATTATGTACTATGCAAATTGTTGACAATCTCATGGAGACGGAAGAGGATCAAGTTCCCAAGAAAAGCGTTCGAAGATCGAAACGGCAGATAAACGATAAGAAGACTTTTTGGTGCAAAGAATGTGATAGCATTTGTGCAGAAGTGGATGGCTGCACATCTCATAATGTTCAAACAATTGCTGATCAACCGGTTCCTTCGAGGGCGATAGCGACCCTACCAAGTTCTTATTTGTCTATCAATAAATTGGCTCCTAATGGAGCAGCAGGGCCAGAATATGGAGTTTTCACGAAAAAAAGCATTCGAAGGCGAACACAGTTTGGCCCAATTGAAGGAGTTTTTTGTGCTTATGATGGCTCGCCATTTGTCGACTCTTTACcgttattgattgaaaatgacgATGGAGAGTTCTTTAAAATCGATGTATCGAACGAAAacacTTCAAACTGGATGCGTTTTGTGCGACCAGCTGTAACTTACAAAGAGCAGAATTTAATGATTTGTCAGCAGAACGAAGGAATATTTTTCCTCACCACGAGAGATATACTGCCAAAGGAGGAATTAAAAGCTGGACCCAATCCGGAATACGCAAATAGGAGAAATTTGTCAATTCTTGAACCGAATCCAAAAAACGCAAGCGattcAAATGGCGATTCATGGCCGTGTTTTGAATGCAATCGCTTCTTCCAGACTTCAGAAAAACTACAAAGTCATATGAACGTTCACGACAATCCGCGAAATGATACGAAAGGAAGAAATAAACGCAGAAAGCTTCACATCACATCAAACAAACTCTTGAAAGTCGTCAACGATCAGGCGGTCCTCTATTCATGTCCACATTGTTCGAAAGTCTTTTCGCGCAGCTACAGTCTAAAACGCCACTTATTGATACATCCGAATGCAAAAGCGGCGCGTTACCAATGTCCAAAATGTGGAGAAAACTTCCTATATCCTCACAATCTCTATCGGCATACAAAAGTTTGTGAAATCGGGAAGTCTAAGGAGCAGGACAAGGATAAGGAAAAGGGAAAAGAGAATTCTGGTCAGAATTCGGCCGATTGGAAATGCACCGCTTGCGGGCTCACTTTTTATAGAGAGTCGCTCTTCAATCTGCACAAACTCGCGCACAGTGTCAGGGGGACGGAAGACTGGTGCAAGTTTGCTGTTTGTCCCGAGTGTGGAGTCAAATTCGAGAAAAAGAACGACCTTGTCAAACATGTGTCGCAGCATGGGAAGTTGGCAGTGAGAAAAGCGGCGAACTCGACTCCATCGGCTGGTTATAAATGCTCAATGTGTTACAAACGTTTTGCCACTAAAGTACGACTGCAACAGCACTGTCTGGTACACGGTGCTGAGGATCAGAAACCACTGCCGTGTAATATTTGCTTGAAGAGGTTCATGAATAACTCTGCACTTTCCTGTCATCTCAAAACTCACAGACAGGAGAAGCAGATGTTTGAATGTCCGATGTGCAAGGAGGTTTTTGAccaaattttaatgttgaaagaCCACGTGGAAACACACCGTGATGAAGATGATACCTTTACCTGTCCGCACTGCCAacgaaattttaccaaatattccgTTATTCGTAAGCACATCAGAGCGCATCATTGCGAACGGAAGCATAAGTGTACATTTTGTGTGAAACGTTTTCCCACTGTCGATAAATTACGGATGCATTTGTTGCGACACTCCGATCATAGGGAATTTCAATGTGCTGTTTGTGGAAAACGCTTCAAGAGGAAGGACAAATTAAAAGAACACGTTACGCGAATGCACAATTCTCAGAGACCTAGTAAAGAACCAACGTCGCCGATTAATCAGGCGAGGAAATTTGTGCCAAAGGTTAATCCAACGGAGTATGATCGATTTATCTACAAATGTCATCAGTGTTTAGTTGGTTTCAAAAGAAGAGGAATGCTAGTGAATCACTTGGCGAAAAGACATCCAGATGTACCGCCGGAATCTGTACCTGAACTTAATTTACCGATTTTAAGACAGACGAGGGATTATTACTGCCAGTATTGCGAGAAGGTTTACAAGAGCAGTAGCAAGCGCAAAGCACACATTATGAAAAATCATCCTGGCGCTGCGTTGCCGCCAAGTAACCGCCACAAAGAAACGGACATTCCAGGCCTGCCCAATTCTACTTTTAGTCAAACCGTAGGAAGTATTACGACAACTCCTCAGGGTTGTCAATGGTGTCACAAGCAATATGCTAGTAAGGCCAAGCTACTGCAGCACCAGCGTAAGAAACACCCCACCCTCATGGAACCAGCGGATCAGGTTCCTAGGCCGCGAAATCGGCCATCTCACAATCAAACCCAACAGCTAGTGTTGAGCGACATCAATTTCATAATGACAGACAGCGTCTCGGCCTGCGACGTAGATGAGTTTACAAAACCCAGGATCTTTAAAATATCCGACGATGTGGACCTAATCAGTGGTGGGCTGGAGTCGGTAGGTCAGCAATACGTGCGAATGCGCGACATACGTTGA
Protein Sequence: MDPRGPPEGAPIDPLDISSIEKATDVSENWSADNIVPSPLCEQPKKMNNRLLFLTVEYVEDQTRDYTRMFSVYEPVSYSPRASSPLSEFEHRVSPHDPNMSSAARYSPTPVQLPPSPFQNSVVVLQNPSSPLIPASETNARTNISFVAQLADQTASQNIPQSDNPADFVDGSSEESLVPGNELILMQGATPELEPSAPPLMLTGLPGSDFALARDFLVMHDDQISVMNSFKNQNIEINESYIPSPMQTVIPNEELDLCETGQSKKELCTMQIVDNLMETEEDQVPKKSVRRSKRQINDKKTFWCKECDSICAEVDGCTSHNVQTIADQPVPSRAIATLPSSYLSINKLAPNGAAGPEYGVFTKKSIRRRTQFGPIEGVFCAYDGSPFVDSLPLLIENDDGEFFKIDVSNENTSNWMRFVRPAVTYKEQNLMICQQNEGIFFLTTRDILPKEELKAGPNPEYANRRNLSILEPNPKNASDSNGDSWPCFECNRFFQTSEKLQSHMNVHDNPRNDTKGRNKRRKLHITSNKLLKVVNDQAVLYSCPHCSKVFSRSYSLKRHLLIHPNAKAARYQCPKCGENFLYPHNLYRHTKVCEIGKSKEQDKDKEKGKENSGQNSADWKCTACGLTFYRESLFNLHKLAHSVRGTEDWCKFAVCPECGVKFEKKNDLVKHVSQHGKLAVRKAANSTPSAGYKCSMCYKRFATKVRLQQHCLVHGAEDQKPLPCNICLKRFMNNSALSCHLKTHRQEKQMFECPMCKEVFDQILMLKDHVETHRDEDDTFTCPHCQRNFTKYSVIRKHIRAHHCERKHKCTFCVKRFPTVDKLRMHLLRHSDHREFQCAVCGKRFKRKDKLKEHVTRMHNSQRPSKEPTSPINQARKFVPKVNPTEYDRFIYKCHQCLVGFKRRGMLVNHLAKRHPDVPPESVPELNLPILRQTRDYYCQYCEKVYKSSSKRKAHIMKNHPGAALPPSNRHKETDIPGLPNSTFSQTVGSITTTPQGCQWCHKQYASKAKLLQHQRKKHPTLMEPADQVPRPRNRPSHNQTQQLVLSDINFIMTDSVSACDVDEFTKPRIFKISDDVDLISGGLESVGQQYVRMRDIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00676996;
90% Identity: iTF_01392982;
80% Identity: -