Btre013381.1
Basic Information
- Insect
- Belonocnema treatae
- Gene Symbol
- -
- Assembly
- GCA_010883055.1
- Location
- NC:44503064-44532076[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 4 1.5e+02 2.8 4.7 2 23 326 348 326 348 0.96 2 22 0.021 0.84 9.9 1.5 1 23 428 450 428 450 0.98 3 22 1.5 58 4.1 0.5 1 19 457 475 457 475 0.97 4 22 0.0063 0.24 11.6 1.0 1 23 499 521 499 521 0.98 5 22 0.027 1.1 9.6 0.2 1 20 569 588 569 590 0.94 6 22 0.35 14 6.1 2.1 1 23 602 625 602 625 0.93 7 22 0.0044 0.17 12.0 0.7 2 23 631 652 630 652 0.95 8 22 0.0026 0.1 12.7 0.9 1 23 683 705 683 705 0.97 9 22 0.0011 0.044 13.9 0.1 1 23 711 733 711 733 0.97 10 22 3.1e-07 1.2e-05 25.1 0.6 2 23 770 792 770 792 0.96 11 22 0.0068 0.27 11.4 0.2 3 23 800 821 798 821 0.96 12 22 5.4e-05 0.0021 18.1 0.2 2 23 829 851 828 851 0.96 13 22 0.005 0.2 11.9 0.4 1 23 860 882 860 882 0.93 14 22 0.68 27 5.2 0.1 2 19 949 966 948 967 0.93 15 22 0.1 3.9 7.8 0.0 2 23 988 1009 987 1009 0.96 16 22 0.016 0.62 10.3 1.2 1 23 1025 1047 1025 1047 0.97 17 22 0.00042 0.016 15.3 1.0 2 20 1065 1083 1065 1085 0.93 18 22 0.16 6.4 7.1 0.7 2 23 1115 1137 1114 1137 0.90 19 22 0.00033 0.013 15.6 0.4 2 23 1163 1185 1162 1185 0.92 20 22 0.0043 0.17 12.1 1.9 1 23 1191 1215 1191 1215 0.95 21 22 0.35 14 6.1 2.0 1 23 1220 1243 1220 1243 0.91 22 22 3.6 1.4e+02 2.9 0.5 2 23 1274 1296 1273 1296 0.93
Sequence Information
- Coding Sequence
- ATGAATGAAATTGAAGAGCTGCAGGGCCTGGAAAGTGCGTGCCGACTTTGTTTAACGACAGATGAAACAAGATCATCCATTTTCGGGACAGCACATTCCGTAGTGCCGTTGACTCAAAAAATACAGAACTGTGTCACTGTTGAGATTTCTCAAGACGACACGTTAACAACTTTGATTTGCATAACTTGTGTTAACAAAGTGAACCAATGGCATCAGTACAAACAATTGTGTCTCCAGTCTCAGGACAAATTGAAGGAATGGTTGACCAGGCAGTCGAAAAATTCTTCGGTCGCAACTGTAAAGCAAGAACCGAGTACTCAAGAAACCGAAGAAGAAAGCCCACAATTATTGCCAGATAAGGATAAAATTCCCGAAGAGACCTCAGCGACAGAGGGTCCCAGCGATGAAATTGAAAAGCTTGTCGAAGCTGAAAGACCAGCTGAAGTTGAGACGCCGGTGGAAATTGAAACACCTGTCGAAATAGAAACCGAGACAGATGTGGAACTTAAACTTCCCGTTGTGGAAATAGAATCACCGGTAGAAATTGAATCTCCGGTGGAAATTGAAGCACCGATAGAAATTGACACTCCCGCGGAAATTGAAACTCCTGTGGACATTGAAACTCCCATGGAAGTCGACACAGTAGTCGAAGAAAGAGTCGAGCGTGAAACGAGAGGCAGTTCCAAGAGAAGATTGTCCAAAGAGACTCTCAATGAAGCCAAGCGATCAGACGCGGTGTCGATTAAAATCGAGCCGCCAGACGACGAGCCCCAGGAAATTGTCGACATTGTGACGCCCACTGAGATATTGCTCCGAAATCCCTTGGCTACGCCTGTTAACGGGAAAGAGGATCAGCCGGCGGAGCCCGACTCGACCCAGAAAATTGTGCCACTCTTGTCGCCGTCACTTCGCGGAAAGAAAAAGGTTCGCCGAGGTCCGCACACCCACTTCCGCGGAGCGCGGATCTTCAAAAGAAAGTGCCTGCATTGTCAAATCAATCTCCATTCCAAGACATCGTACGCAAAACACATGGCAAGGTTTCACGGCGGTGCGAGTGTCACAGCATCAGTTCCGAAAGCGCCAACTCCAAGAGTCGCAGCAGCCCCAGCAAATCCGGCAACTTCGAGAGCCAAGAGTAGTCAAAACGTGATTCCGGTGGTTGAGACGAGTGCCGACGATGTCGAGGAATTGATCGAGGACGTGGAGGAGGAATTGGAGAATTTGGGCGAGGACGCTCCCTTGACGCCCGTCCAGCAGAATATCATCAGTCAGCTCAAGACCTACTCCTGCTACTCGTGCGATGAATCATTCCAGGATCGGCGGAGCACTCTCAATCATATCAGACAGCACATGCCGGATTTGAGATCTTACACGTGTGTCGCGTGTCTCACCGAATTTCCCGATCGGTCCACCTACAAGAAGCACTGCGAAGCTTCGTTTGAGTGCGCGATGAAGATTGCCCTGGTGGTTCCGGATCAGGGAACGGAGAAGTACTTCACCTGCAACATGTGTCTGCGACCCTTGTCCAATCGGAAGGATCTGCTGACGCATTTGTCGAAGCACTCGGACAAGCAGTACGAAGACCTGATGTCGCCTGCGGCTCCACCAAAACTCACACCGATGGTCTCCTCGACGCCGAATTTGTCGCGACAGTCTGACATTCCAATTCGCTCGCCATACGTGAACGGCGATCCGGCCTGCAATCACGAGTGTGACTTGTGCGGAATGATCTACCGATACAAGCCGAATATGGTGAAGCATCGTGAACTCTGCAACAGTTTGCAGCCGGAAGCGCGCACCTCGTACAAGTGTGTCGACTGTGGAATGACGTTCCTGGTGTTTAGCAAATTTCACAGTCACGTGACGACCGAGCACAGGAAGAAGGAGTTGAAGTGTCCGAAGTGTGCGGCGAAATTCCGCTCGCCGAGTGATTATCTCGCGCATCACGAGTACCATCGAATGGGGAAGAAGGAGTCGTCGAGCCGAAATTACAAGAGTCAGGAAGTAGTTGTCGAGGAGGTGCAAGAGAGTCCCCAGAAGCGAAAGTTCAATTGTACACTCTGCAGTTTGCAGTTTTCCTCGCGAGTCGAACTCACCGAGCATCGTAATCTGCATCTGAAAGTGAAGATCTACTCGTGCGTGATTTGCCGCAGCATGTTTAGTAGCGCCGGAGCCCTGGAAATTCATATGAAGGATCATGGCATTGATGATCCGAATGAGAGAACTGCGAACAGTTCGTGTATGGAGTATGGACAGGAGGAGGGTTTAGATACTTCGAAGAATTCGAATCCGCCGCTCCGGAAGAACGAGTGTTTTGAGTGCGGCAAGACATTTTCGAATTACGCGAATCTGCGAAGGCATATAAGGAATGCGCACGAAGACGAGCGACGCATTGACTGTTCGGAGTGTATTCGAACATTCAAGAGCAAGGAGGCCTACGAAGATCATCTGCGGAGTGCACACAATCCCGAGAAAACTGTCCTGCAGTGTCCACAGTGTCCGAAAACGTTTGTTTTCCAGGCGAATTTGGATCTGCATCGGCGCAATGTGCACATTAATAAGCCGGAGCCGAGCAATCACGAGTGCGATGTGTGTGGTAAATCATTCCTGGAGGAATCTTCGCTGAAGATCCATCGCGGCTGGCACAATCGCGCCAATTCGCGTTTTAGTCTCGAAAACTATGAGAGAGATCAACTCGCATCGCCGAATCCGAGTGTTGCCAAACCGGCAAAGGCGAGAAAGTCTTTCCCGAATGTTCCTCTTCAGCAGCAATTGCAACTCCAGCAGCATCATCATcatcagcagcagcagcagcgTCAGCAGCAGCGGCAATTGCCCGAGCTTCAGTGTCAGGTCTGCGATGACAAGTTCTTCGACGTCGCGGAATTGCGGAAACATGTTTGGGATGTTCATTGTGCTCGCGCAACCAAAGTCGAGAAACCGTTTGTTGTCGACGACCTGCAGTGTGAACTCTGCACGAATATCCTGCCCGATCAGCAGAGTCTCGAGGCGCACATGGAGTGGCACGAGCGCAATCCAATTTTGAGCAACAACTATGGAAACACAAATGCCTACCGTTGCGATGTTTGTGACAAGTATTATAGTTCACTCAAGATCCTTGCGAAGCACAAAAAGTTGCACAAGCAGGTTGCCCAACCACTGAGATTCCAGTCGCTCCCGATCAAGAGGCCTTCGTGCAACGTTTGCGGCAGATGCTTCACGGCCGAGTCTTCGCTGAAAAGGCACAAGGCAATGTCGCCCGAGTGCCAGTCTTATTTGTCCGGAAGATTGACGGAAGTGCCGAGAAATCCGGAGGATTCGATGTTCAAGAAGAAGCCCGTTACCTGTCACATTTGCAAGACTGTCTTCCCGAGTATGAGTATTCTGTATCAGCACAAGCAGCTGGCGCACAAAGTGGGCTTCAACAAGGACAGGAAATCGCCGAGCGGTGAGTGTGTCCCGTTGGCGAGTGGCGAGGGTGGTGTTTCGTGCAATGTTTGCGGCAAGCAGTTCCCCGGGCTCTCCAATCTCAAGCAGCACTTCACGATCAAGCACAAAAATGTTAGCCAGCATCCGTGCACGATTGCCAATTGCAAAATGATCTTTTCCACGTCGCACGCACTGAAAAATCACGAACTCACGCACTCGAACATGATCTACAGTTGCGGTCTCTGCGAGAGGCACTTTTTCCATCGAGGCGCGATCATCAAGCATGTGTTCAACGCCCACAAGATGATTTACCAAGCGACGGGCGACAAGGATTCTCTCTTCAAGGAGACCGATTTGAGTACGTATGTCGTGAAAGGCGCGACTGGGACTGTTTGTCCACGATGCAGAGTCAAGTATCCGAATATTAAGGCTATGAAGATTCACTACTTCAAATTCCACGAGACTTTTGCCTAA
- Protein Sequence
- MNEIEELQGLESACRLCLTTDETRSSIFGTAHSVVPLTQKIQNCVTVEISQDDTLTTLICITCVNKVNQWHQYKQLCLQSQDKLKEWLTRQSKNSSVATVKQEPSTQETEEESPQLLPDKDKIPEETSATEGPSDEIEKLVEAERPAEVETPVEIETPVEIETETDVELKLPVVEIESPVEIESPVEIEAPIEIDTPAEIETPVDIETPMEVDTVVEERVERETRGSSKRRLSKETLNEAKRSDAVSIKIEPPDDEPQEIVDIVTPTEILLRNPLATPVNGKEDQPAEPDSTQKIVPLLSPSLRGKKKVRRGPHTHFRGARIFKRKCLHCQINLHSKTSYAKHMARFHGGASVTASVPKAPTPRVAAAPANPATSRAKSSQNVIPVVETSADDVEELIEDVEEELENLGEDAPLTPVQQNIISQLKTYSCYSCDESFQDRRSTLNHIRQHMPDLRSYTCVACLTEFPDRSTYKKHCEASFECAMKIALVVPDQGTEKYFTCNMCLRPLSNRKDLLTHLSKHSDKQYEDLMSPAAPPKLTPMVSSTPNLSRQSDIPIRSPYVNGDPACNHECDLCGMIYRYKPNMVKHRELCNSLQPEARTSYKCVDCGMTFLVFSKFHSHVTTEHRKKELKCPKCAAKFRSPSDYLAHHEYHRMGKKESSSRNYKSQEVVVEEVQESPQKRKFNCTLCSLQFSSRVELTEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIDDPNERTANSSCMEYGQEEGLDTSKNSNPPLRKNECFECGKTFSNYANLRRHIRNAHEDERRIDCSECIRTFKSKEAYEDHLRSAHNPEKTVLQCPQCPKTFVFQANLDLHRRNVHINKPEPSNHECDVCGKSFLEESSLKIHRGWHNRANSRFSLENYERDQLASPNPSVAKPAKARKSFPNVPLQQQLQLQQHHHHQQQQQRQQQRQLPELQCQVCDDKFFDVAELRKHVWDVHCARATKVEKPFVVDDLQCELCTNILPDQQSLEAHMEWHERNPILSNNYGNTNAYRCDVCDKYYSSLKILAKHKKLHKQVAQPLRFQSLPIKRPSCNVCGRCFTAESSLKRHKAMSPECQSYLSGRLTEVPRNPEDSMFKKKPVTCHICKTVFPSMSILYQHKQLAHKVGFNKDRKSPSGECVPLASGEGGVSCNVCGKQFPGLSNLKQHFTIKHKNVSQHPCTIANCKMIFSTSHALKNHELTHSNMIYSCGLCERHFFHRGAIIKHVFNAHKMIYQATGDKDSLFKETDLSTYVVKGATGTVCPRCRVKYPNIKAMKIHYFKFHETFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00011385;
- 90% Identity
- -
- 80% Identity
- -