Btre005640.1
Basic Information
- Insect
- Belonocnema treatae
- Gene Symbol
- -
- Assembly
- GCA_010883055.1
- Location
- NC:33596717-33617602[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-12 8.3e-09 34.7 0.1 4 40 18 53 15 57 0.89 2 2 6.5e-05 0.064 12.6 0.0 4 44 305 344 302 345 0.79
Sequence Information
- Coding Sequence
- atgACGCGTGCGAGGAAGCGCACTTCGAAAATAGGGAAATGGTCTTCCAACGACTTACAAGCAGCTTTAAAAGCCATACAAGAAGGAAAACCAATGACTCAAGCATCCGCTTTATACGGAGTTCCTCGCACAACAATATACAGGAGAATAAAACGCAACAAATTTTCCGCTCCAAAAATGGGTCGCAAGTCCGTCTTCTCGACGGAACAAGAGGAAATCCTAACCAACCACATAAACACATTACAACGCACATCTCCCCTGAACTCCCAAAAAGTTCGAAAACTAGCTTTTGACCTTGCTGAGAAATTACAGCTTGATCATAATTTCAATAGAGAGAAACGGGAAGCTGGTCATGAGTGGCTATCATCTTTCCTCAAACGAAACCCGCGAGCTCGAATTCTGAGACGAGCTGCTGAGAGGATTCAAGGGACACAAGCagtgaaaattgaaaatcctaATTCCTTCGATAATTTGGATGGAAATCTGCCTGCGATTGAAACTCAGGATGAGCTTAAGAAAGAAGAGGTATTCCTTAAGATGGAAGAGGAATTTCCCGAGGATTCAGAAATCCTGGATTTACATAATGATCCTCTAGAGATTAGTTCCGAGATTTTTGGGAGTAAAAGTTACAGAGGCTTAAAAGGCTCCAAGAGTATCAAACAACAAGTTGAGCATAAAGTTAATGGAAAATTCGAAATGAAGCTGAGAGTGCGGGAAAAGATGTCTGTTGTTGAAGAAGATACAAGTACTATAAGGACTCACTTGAACAAACAAACGAAGATTGTGGACAGAAGTTCATTCCTCGATCAGTTGGAGAGATCTAATCAGGTTGTTGTTGAAGAGAAGGATGACGCACCTGCACTGAAGaagCGGTCAAAAAGAAGCACGAAAACAGCTTCTTGGACTGCCAAGGATTTGAATGCGGCTCTACAGGAATTAGCACAAGGGAAAACGATGACAGCAGTTTCAGCTTTACACGGCGTTCCCCGTACTTCAATTTATAGAAGATTGAAGCAGAAAAACTTTTCCTCACCAAAGCTTGGCCGAAATTCCGTCTTTACACCGAAACAAGAACAGTGCCTAGCTgattacattttaaaagtttcgaaatattGTCCCATGAATACGACACAATTACGGAGAATGGCTTTTGAATTAGCTGAGAAATTGAATCTAGACCACAATTTTAACAAAGAGATAAGACTTGCAGGAAGAGATTGGTTGGCAGGGTTCTTTAAACGTAATCCTACCGCGGATTTCAAAGGCAAACAAAAGTATTATGAAACAGACATTCAACAaagtgaaaagaaaatttatttctataattttgatgatttggTTAAATCTTTTCCATCTCTGGAATGCCAATCAGTTGATGTTTAG
- Protein Sequence
- MTRARKRTSKIGKWSSNDLQAALKAIQEGKPMTQASALYGVPRTTIYRRIKRNKFSAPKMGRKSVFSTEQEEILTNHINTLQRTSPLNSQKVRKLAFDLAEKLQLDHNFNREKREAGHEWLSSFLKRNPRARILRRAAERIQGTQAVKIENPNSFDNLDGNLPAIETQDELKKEEVFLKMEEEFPEDSEILDLHNDPLEISSEIFGSKSYRGLKGSKSIKQQVEHKVNGKFEMKLRVREKMSVVEEDTSTIRTHLNKQTKIVDRSSFLDQLERSNQVVVEEKDDAPALKKRSKRSTKTASWTAKDLNAALQELAQGKTMTAVSALHGVPRTSIYRRLKQKNFSSPKLGRNSVFTPKQEQCLADYILKVSKYCPMNTTQLRRMAFELAEKLNLDHNFNKEIRLAGRDWLAGFFKRNPTADFKGKQKYYETDIQQSEKKIYFYNFDDLVKSFPSLECQSVDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00089442;
- 90% Identity
- -
- 80% Identity
- -