Aque016055.1
Basic Information
- Insect
- Andricus quercuspetiolicola
- Gene Symbol
- -
- Assembly
- GCA_035222095.1
- Location
- JAWWEA010000101.1:6309751-6312775[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-11 4.8e-08 34.8 0.1 4 40 18 53 15 57 0.89 2 2 0.00023 0.38 12.7 0.0 4 44 280 319 277 320 0.79
Sequence Information
- Coding Sequence
- atGACGCGTGTGAGGAAGCGCACTTCAAAAATAGGGAGATGGTCTTCCAACGACTTACAAGCAGCTTTAAAAGCTATACAAGAAGGAAAACCAATGACTCAAGCGTCCGCTTTATACGGAGTTCCTCGCACAACAATATACAGGAGAATAAAGCGCAACAAATTTTCCGCTCCAAAAATGGGTCGTAAGTCTGTCTTCTCGACAGAACAAGAGGAAATTCTAACCAACCACATAAACACATTACAACGCACATCTCCCCTGAACTCCCAAAAAGTCCGAAAACTAGCTTTTGACCTTGCTGAGAAATTACAGCTTGATCACAATTTCAATAGAGAGAAGCGGGAAGCTGGTCATGAGTGGCTATCATCTTTCCTCAAACGAAACCCTCGAGCTCGAATTCTTAGACGAGCTGCTGAGAGGATTCAAGAGACACAagaagtaaaaattgaaaatcccaaTTCCCCCGACAATTTGGATGAAGATCTTCCTGCGATTGAAGCTCAGGATGCGCTTAAGAAAGAAGAGATATTCCTTAAAATGGAAGCGGAATTTCCCGAGGATTCAGAAACTCTGGATTTACATTCTGATCCTCTAGAGATTAGTTCCGAGGTTTTTGGGAGCGAAAGTTACAGAAGCTTAGAAGACTCAAAGAGTATCGAAGAAACTGAAAATAAAGTTAAAGGGAAATTCGAAATGAAGCTGAGAATTGTGGATAGAAGCACTTTCCTAGATCAGTTGGAGAGGTCTAATCAGGTTGTAGTTGAAGAGAAGGATGACGCACCTGCGCTTAAGAAGCGTGCAAAAAGAAGCACGAAAACAGCTTCTTGGACTGCCAAGGATTTGAATGCAGCTCTACAGGAATTAGCACAAGGGAAAACAATGACAGCAGTTTCAGCTTTACACGGCGTTCCCCGTACTTCAATTTACAGAAGATTGAAGCAGAAGAATTTTTCCTCGCCAAAGCTTGGTCGAAATTCTGTCTTCACACCGAAACAAGAACAGTGCCTGACTGATTACATTCTAAAAGTTTCCAAATATTGTCCCATGAATACGACACAATTACGGAGAATGGCTTTTGAATTAGCTGAGAAATTGAATCTAGACCACAATTTTAATAAGGAGATAAGACTTGCAGGAAGGGATTGGTTGACGGGGTTCTTTAAACGTAATCCTACCGCGGACTTGAAAGGCAAACAAAAGTATTATGAAGTAGAAAATCATCAAAGTGAAAAGAAAAGTTATTTCTACGATTTTGATGATTTGGTTAAATCTTTTCCATCTCTGGAATGTCAGTCAGTTGATGTTTAG
- Protein Sequence
- MTRVRKRTSKIGRWSSNDLQAALKAIQEGKPMTQASALYGVPRTTIYRRIKRNKFSAPKMGRKSVFSTEQEEILTNHINTLQRTSPLNSQKVRKLAFDLAEKLQLDHNFNREKREAGHEWLSSFLKRNPRARILRRAAERIQETQEVKIENPNSPDNLDEDLPAIEAQDALKKEEIFLKMEAEFPEDSETLDLHSDPLEISSEVFGSESYRSLEDSKSIEETENKVKGKFEMKLRIVDRSTFLDQLERSNQVVVEEKDDAPALKKRAKRSTKTASWTAKDLNAALQELAQGKTMTAVSALHGVPRTSIYRRLKQKNFSSPKLGRNSVFTPKQEQCLTDYILKVSKYCPMNTTQLRRMAFELAEKLNLDHNFNKEIRLAGRDWLTGFFKRNPTADLKGKQKYYEVENHQSEKKSYFYDFDDLVKSFPSLECQSVDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00200671;
- 90% Identity
- -
- 80% Identity
- -