Basic Information

Insect: Bellardia bayeri
Gene Symbol: -
Assembly: GCA_950370525.1
Location: OX493265.1:6718209-6723351[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.018 1.5 10.3 0.1 3 23 38 58 36 58 0.96

2 17 0.0053 0.43 12.0 2.0 1 23 64 87 64 87 0.96

3 17 0.18 15 7.1 0.1 3 23 92 114 91 114 0.87

4 17 0.0035 0.28 12.5 0.1 1 22 122 143 122 143 0.95

5 17 1.2e-05 0.001 20.2 1.6 1 23 151 173 151 173 0.97

6 17 0.00015 0.012 16.8 3.5 1 23 179 201 179 201 0.98

7 17 0.00013 0.011 17.0 1.1 1 23 207 229 207 229 0.95

8 17 0.24 20 6.7 2.0 2 21 236 255 235 256 0.95

9 17 3.2 2.6e+02 3.2 0.2 2 23 692 714 691 714 0.94

10 17 0.39 32 6.1 0.6 1 10 738 747 738 760 0.79

11 17 0.73 59 5.2 2.3 1 23 768 792 768 792 0.92

12 17 2.7 2.2e+02 3.4 1.0 3 23 798 819 798 819 0.95

13 17 0.012 1 10.8 0.3 2 21 832 851 831 852 0.92

14 17 0.00026 0.021 16.1 0.9 1 23 860 882 860 882 0.98

15 17 8e-06 0.00065 20.8 1.8 1 23 888 911 888 911 0.97

16 17 8.3e-05 0.0068 17.6 1.3 1 23 917 939 917 939 0.98

17 17 0.00053 0.043 15.1 1.1 1 21 945 965 945 966 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.018	1.5	10.3	0.1	3	23	38	58	36	58	0.96
2	17	0.0053	0.43	12.0	2.0	1	23	64	87	64	87	0.96
3	17	0.18	15	7.1	0.1	3	23	92	114	91	114	0.87
4	17	0.0035	0.28	12.5	0.1	1	22	122	143	122	143	0.95
5	17	1.2e-05	0.001	20.2	1.6	1	23	151	173	151	173	0.97
6	17	0.00015	0.012	16.8	3.5	1	23	179	201	179	201	0.98
7	17	0.00013	0.011	17.0	1.1	1	23	207	229	207	229	0.95
8	17	0.24	20	6.7	2.0	2	21	236	255	235	256	0.95
9	17	3.2	2.6e+02	3.2	0.2	2	23	692	714	691	714	0.94
10	17	0.39	32	6.1	0.6	1	10	738	747	738	760	0.79
11	17	0.73	59	5.2	2.3	1	23	768	792	768	792	0.92
12	17	2.7	2.2e+02	3.4	1.0	3	23	798	819	798	819	0.95
13	17	0.012	1	10.8	0.3	2	21	832	851	831	852	0.92
14	17	0.00026	0.021	16.1	0.9	1	23	860	882	860	882	0.98
15	17	8e-06	0.00065	20.8	1.8	1	23	888	911	888	911	0.97
16	17	8.3e-05	0.0068	17.6	1.3	1	23	917	939	917	939	0.98
17	17	0.00053	0.043	15.1	1.1	1	21	945	965	945	966	0.95

Sequence Information

Coding Sequence: ATGCAAGTACCTTTTAATGCCGATGCTAGTGCCGCCTCTACATCTTCAGCCGCTGCGGCCCAACAAAACATGCTGGTGAAACTTTCCACAGATGGTGTGCCCAAACTGTTTTGTCCTGTTTGCAACAAAGCCTTAGTATCTCTAGCCGGTTATGTGAAACATGTCAAGAAACATGAACCGCCCGGAGGCTTCGTCTGTCGCTATTGTGAAGCCCGTTTTTGTTCCGATGAGGAACTTAAAAAGCATCGTGAATCCGAACACACCACCATAGCCTGTCGCCTGTGCAAAGATATCACCTTCACTAATGAAGACGATTATCGAGCCCACATTCGGGACATACACCAGGGTGTAGATAGAGAAATATTTACGTGTGAGAAATGTGGAGCCGCCTACAAAACTATCGACCCATATCGCCGACATATGGAAACGGAATGTGGACGCATTAAGCCCTATAAATGTGATAAATGCCAGATGGCTTTTGTGacgaaatacaatttgaaacaGCACTTGGATAATCATTCTGGTGAATTGAAATTCTGCTGCAGTTATTGTGGTCGTAATTTTAAGCAAAAGGCTCGTTTGGTAGAACATGAGAGGACACATACGGGTGAAAAGCCTTATACTTGTGATGTTTGTGGCAAAAGTTTTTCGCATCGTGAAAGTATTGTTACACATTCTTCCATTCATACCGGCATACGTCTGGTAGAATGCAAGGGATGTAGTTCAAGATTTAGCTGTTATTCCAATTTGATCAAGCATCGCAGAAACCGTCCAGATACCTGTGGTCTGCCGCAATTTGATCCTCCCAGGAATCGCATTAGAAAACATACTTCAAGAATTCCGGCCACTTTAAATCCCACCTCCGAAATCAAAGTGGTAAATgtcaataaaatcattaaacctGATGATCAGGTTAAAGTGGCAAACTTGAAAAAAGAATCGCCCAACAAACCTGCAGGCAGTAAGCCTGTAAAAACAAAACCCACGGCCCGCAAACGTACAGGACCAGCACCACACACTTTGCGCAAACGTAGTCCACGTAAAAAGATTATAGATTTTGATATTATCGAAGATGAAGACTTAAAGGTAGAGGAGTTTGAGGGTGAAGACTTAGATGATGATGAGGATTATTTGCCGCTTAAACCGAAACAAAAATCGGAGCTAAAAACCGCCCAAGAGACGAGTATACCACCACCTGAGATTGTCCTGACTGTTGATAAACCATTGCAAAATCAAACGACTACACAATGGTCGGACGACAGCGAAGATGAATATGTGCCAGATTTTGAGCCTGCCGATTCGAATAGCGACGATGAGGATGACAAAGCCCTCGAGGATTTCAAGATACCTCTGCCTGCCACCGGCATTAAGCAGGAAaactatgatgatgatgaggatgATGTAGCAATAACCACTAATATACAAATAGAGCCTCTAGGAGAGTTTGAATATACCCGCATGGATTCCTACACAACACAAGTGAAGTACGAAGATGAAAAGGataatttatttgatgaaaAAGATCGCATTTTGGAGCATTTGTTAAATGAGAATGATTATACGCCGTTGGAAGAGGTGTCCGAGGACAAATCTTCGCCCaaacaaataaaacgaaaaagacCGCGTAAAGCTTGTGACTCAAAAGATAGTCAAGATACTGATGATATTTTAAAAGAGGCGGAAGTAGCTTATATCAAATATGAAGATAGTGATGATGTAGAAGAACCCGGCGGAGATATTTTAGAAGAAAAATACAAGGCCGTAGTAGCTACGCAGGATGATATTAAAGACTGCTACGTTTTACTAGAAGATATTAGCAATTGTTTTCCTGCCCTCAAAGAATCACCTAACGTTAAAGTGCCACGCAACTTTCAACCTTTCTTCTCCAaatccgaaaaaattaaaaagttcatTAAAAAGCGTGGCAAATATCGTCCTAGACGTACCAAAGCCGAACCCGGCTGTGATGAAGATAACAAATCGGGTGCTGGCAAATCTTATCGTTTAGCGTCCATCTCAGCCAAACAATTAAGAGAGCGCATGAAGTTGTTGAAAAAACGCGATAAATCATGGCAATGTGCCGACTGCATCAAAATCTATTACATGCGCAAGCCTTATGAAAAACATTTACGTGAGGATCACAAGAAGTCGGAAGAATTTATAAAGGAACTATTCAAAAATGAGCTGGAAGATGTGCAAACTGATGATGTCTTCAAATGTCATATATGCGATAAAATTTACTTGATGGAGAAACGTTTATTGTCACACATACCCAAACACGGGGCAGATGGCAGTTTAATACACAAGTGCCCCTGTTATTGTACACTGTATTTTGCCACACGCGAAGAAGCCACTGCCCACGCCCAGGATAAACACAAAGATATGTTATGGTGTGAAATCTGCGAGAAATTCATGACCGGTTGTGATGCTCTAAAGTCCCATAAGGCACGCATACATGGGGGCAATAAGGATTACAAAAATAATCGCAATTTGATATGCATGAAGTGCGGCAAGAAATTCATGGGACGCACTCAGCTAACGGACCATGAACGTTCCGATTGCGGCCGCTTGCCTTTGTATCAGTGTCAGGAGTGTGGCAAATGTTTAACCACGGCGGGTATACTCAAAACCCATATGCTATTGCACAATGATGCGCGGCCCTACCAGTGTGATAAGTGTGGTAAAACGTTTAAGATTAAGGCCCAGTATAAAACACATATTAAATATGCTCATACAGATGAGAAGCGCTTTAAGTGTCATcttTGTCCCAAAGAGTATCCTTATCGTGAGAGCCTGTTGACCCACATGTCAGTGCATACGGGCATCAAACGTTTTATGTGCAATGGCTgtggcaagcgttttacttGTGTTTCTAATCTGCAAGCTCACCGCAAAGTACAGGCTGAAACTTGCGGCCAATTGCCTTTAAATGCCAAGGCCACTCAGTATATGGGTGTGCAAAAGGGCAATCTTTTAATGGGAGCCAAACCAGAACCCGGTTTGGATTATGTGGAAACCAGAACCTTTGTAGCCAAAGATGTTATAACACATGACTTGCCTATGGCCCAAGAATTCAACAATCAGCCTCGTAATATGCAGCAAGATGGCTCCCTAAGTGATGGTATACCCCTAAACTATGTAACCTCGGGATCTGAaattatacttatgtataatagagattaa
Protein Sequence: MQVPFNADASAASTSSAAAAQQNMLVKLSTDGVPKLFCPVCNKALVSLAGYVKHVKKHEPPGGFVCRYCEARFCSDEELKKHRESEHTTIACRLCKDITFTNEDDYRAHIRDIHQGVDREIFTCEKCGAAYKTIDPYRRHMETECGRIKPYKCDKCQMAFVTKYNLKQHLDNHSGELKFCCSYCGRNFKQKARLVEHERTHTGEKPYTCDVCGKSFSHRESIVTHSSIHTGIRLVECKGCSSRFSCYSNLIKHRRNRPDTCGLPQFDPPRNRIRKHTSRIPATLNPTSEIKVVNVNKIIKPDDQVKVANLKKESPNKPAGSKPVKTKPTARKRTGPAPHTLRKRSPRKKIIDFDIIEDEDLKVEEFEGEDLDDDEDYLPLKPKQKSELKTAQETSIPPPEIVLTVDKPLQNQTTTQWSDDSEDEYVPDFEPADSNSDDEDDKALEDFKIPLPATGIKQENYDDDEDDVAITTNIQIEPLGEFEYTRMDSYTTQVKYEDEKDNLFDEKDRILEHLLNENDYTPLEEVSEDKSSPKQIKRKRPRKACDSKDSQDTDDILKEAEVAYIKYEDSDDVEEPGGDILEEKYKAVVATQDDIKDCYVLLEDISNCFPALKESPNVKVPRNFQPFFSKSEKIKKFIKKRGKYRPRRTKAEPGCDEDNKSGAGKSYRLASISAKQLRERMKLLKKRDKSWQCADCIKIYYMRKPYEKHLREDHKKSEEFIKELFKNELEDVQTDDVFKCHICDKIYLMEKRLLSHIPKHGADGSLIHKCPCYCTLYFATREEATAHAQDKHKDMLWCEICEKFMTGCDALKSHKARIHGGNKDYKNNRNLICMKCGKKFMGRTQLTDHERSDCGRLPLYQCQECGKCLTTAGILKTHMLLHNDARPYQCDKCGKTFKIKAQYKTHIKYAHTDEKRFKCHLCPKEYPYRESLLTHMSVHTGIKRFMCNGCGKRFTCVSNLQAHRKVQAETCGQLPLNAKATQYMGVQKGNLLMGAKPEPGLDYVETRTFVAKDVITHDLPMAQEFNNQPRNMQQDGSLSDGIPLNYVTSGSEIILMYNRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01261217;
90% Identity: iTF_00259113;
80% Identity: -