Bbay013600.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bellardia bayeri
Gene Symbol
-
Assembly
GCA_950370525.1
Location
OX493266.1:9600993-9603709[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.0029 0.23 12.8 3.2 1 23 182 204 182 204 0.98
2 15 0.00084 0.068 14.5 3.5 1 21 210 230 210 231 0.94
3 15 0.84 68 5.0 6.1 1 21 289 309 289 310 0.94
4 15 6.2e-06 0.00051 21.2 1.4 2 23 320 342 319 342 0.94
5 15 2e-06 0.00016 22.7 2.1 1 23 431 453 431 453 0.99
6 15 0.0082 0.67 11.4 3.4 1 23 459 481 459 482 0.95
7 15 0.0056 0.45 11.9 0.3 1 23 503 526 503 526 0.96
8 15 1.2e-05 0.00099 20.3 2.6 1 23 532 554 532 554 0.98
9 15 2.4e-06 0.0002 22.5 2.4 1 23 560 582 560 582 0.99
10 15 1.4e-07 1.2e-05 26.3 1.8 1 23 588 610 588 610 0.96
11 15 0.0092 0.75 11.2 4.1 1 23 616 638 616 638 0.97
12 15 0.0011 0.089 14.1 2.2 1 23 644 666 644 666 0.96
13 15 7.3e-07 5.9e-05 24.1 0.4 1 23 672 694 672 694 0.99
14 15 1.7e-06 0.00014 22.9 1.7 1 23 700 722 700 722 0.99
15 15 0.0096 0.78 11.1 0.1 1 19 728 746 728 747 0.97

Sequence Information

Coding Sequence
ATGTTAATACTTGAAATATATGGACGGGTGTGTCGAGTGTGTATGTGTAAATCGAATAATTTGCATGACTTAAATGACACCACCGAAGAGTATCTCACCATGAATGAAATGCTGACAAAAACTGTCTCCGGCATACATGCCAACATCGAATTTCCAGTGCCTCAAGAGATTTGTGACTTATGCATGGAACATTTACAGATTTCCTATAGATTCCAACAACTGTGTATGAACACCAACGAACAGATGTTGAAAATATGGGAACAGTCCCAAAAGGCCGAAGTTAAACAGCAACCATTAGCATTAGGTGAAGTAGAGAATGAAGATGAACCGGATCCCATTAAGGTGGAATATGATATGGTGGAAGGTGAAGAGCAAAAATTCGATAATGTGGAAATGTTAGAGGATTTCGAAAATGTAGAAAATGGCAATAAATGGGAAAATGATACGGATGACGAACAACCGGATAAAGATGAATTgGGCTACCAAGACACTTCATTAAAATCAGCCTCTTCATCAGCATCTGGACGTCCATCGGCTGGACGCTTTCCTTGTTTAGAATGTAAGGAAACATTTGCAAAGCATTCTATATTGAAACGTCATCGCCGTAAACATGAGTCAACACATCCCTTTGATTGTCACAAGTGTACACAACGTTTCAAAACGAAAAGTCTCATGCAAAAACATTGGAAAAGCTGTAAAAAAGACAAAAGAAATGTGGCGAGTAAAAGCGGTAGtgaggatgatgatgatgaggatATGCCGCTAAGTTCTTTAAAGAAAACCGAAACAGATAATGAAAGTGATGTCTccaaggaaaataataaaaagaaacgaaaatcTGTAAAAGCTGACAAAAAATCTCCCTACCATTGCTCCAAATGCGATAGCTATTTTAAATACGGCTATCAGCTTACAAAACATCGTTGCAGTGTAGATGATAATAATACGCATATGAATAAATGCGAAATATGTAACAAGACTTTTACCACAGAAAATATGTTACAGAAACATATGAGCGGCAAGCATAAAGACAACAAAACCACAAGCAAGACAGAGAAAAAGACTTCAGACAAAAGTAAAGTCTCTAACAACAGCGATGACGATGCTGGCAATGCTGATGACCGACCCGATGGCCAAATTGAAGAAGTCGATATGGATCAAGacaatgataatgatgataattGGAATGATACGAATCAGGGCGAGTCATCGGATGACAGTGATTCAGATTATGCTGAAAAGGAGAAGACCACAACAGCAAAGGCCAAACCAGAGCTGGCTGCAAATCAATATAAATGTAAAGAATGTGATGCCTCATTCAGATTTGAAAAACAACTCGCCCGTCATATGAAGAAACACACAGATGCCCATCGTTTTGTGTGTGTTCTATGTTGGGATCGTTTCAAGTATCCACATATGTTGCAGAAACATATGGAAAAACATCATCCCGAAGATAATCCCAATCCCAAAGTGGCAGAGACAAAACCGGAAAATGTAGAAAAGACACATGTTTGCAGTTACTGTCCATCGGCCTATTCAAATGTGGGTGGCTTGGCCCAACACATGAGTAAGAAGCATCCGGAAATTAAGCCGTTCAAATGTGACAAATGCGACAAGACTTTTGTGGTAGAGgaacatttaaaaatacacacaaatcgTCATATgggtattaaaaactttaagtgtgaTCTTTGTGATAAATcattttcgtTTAAGTTTGCCATGAAACAGCATATGCGCATACATACGGGAGATTTGAATTACTTGTGCACATTATGTGGCAAGAAATTCTATAGACCTAGTAATTTACGCCAACACATGCAACGTCATGGAGATGATAAACCTTACACATGTCCTCACTGTCCAAAACGTTTCAAATGTCCTTCGGATCGTTATATTCATTTAATGTCTCATCAGGAAGGTAAAAACCATGTATGTCAGACTTGTGGGGCCAGGTTTTCTCGAGTCGATACTTTACATCAGCATCAAATACTGCACACAGGTGAAAAACGCTATAAATGCGATCAATGTCCTATGgcaTTCCCCcgtttaatgaatttaaatcgTCATTTACGCACTCATACCGGTGAGAAACCgtacaaatgtaaattttgtgaaaaggCTTATGCTCAAAGTAATGATTTGAATAAACATTTACGCACCCATGTGGGTGAGAACACTTATATGTGTACCCAGTGTCCGGCCGCCTATAAATATCAGGCGGACTTAAGGAATCACGAATGGGAACATTATCGCTTACAAAAAGAGGCCGAACAGAGAGCTAAAGATGAAGCGTCTGCCTTAAAAATGAAAGAAGAACAAACTGTTATGGaagtaaatgtataa
Protein Sequence
MLILEIYGRVCRVCMCKSNNLHDLNDTTEEYLTMNEMLTKTVSGIHANIEFPVPQEICDLCMEHLQISYRFQQLCMNTNEQMLKIWEQSQKAEVKQQPLALGEVENEDEPDPIKVEYDMVEGEEQKFDNVEMLEDFENVENGNKWENDTDDEQPDKDELGYQDTSLKSASSSASGRPSAGRFPCLECKETFAKHSILKRHRRKHESTHPFDCHKCTQRFKTKSLMQKHWKSCKKDKRNVASKSGSEDDDDEDMPLSSLKKTETDNESDVSKENNKKKRKSVKADKKSPYHCSKCDSYFKYGYQLTKHRCSVDDNNTHMNKCEICNKTFTTENMLQKHMSGKHKDNKTTSKTEKKTSDKSKVSNNSDDDAGNADDRPDGQIEEVDMDQDNDNDDNWNDTNQGESSDDSDSDYAEKEKTTTAKAKPELAANQYKCKECDASFRFEKQLARHMKKHTDAHRFVCVLCWDRFKYPHMLQKHMEKHHPEDNPNPKVAETKPENVEKTHVCSYCPSAYSNVGGLAQHMSKKHPEIKPFKCDKCDKTFVVEEHLKIHTNRHMGIKNFKCDLCDKSFSFKFAMKQHMRIHTGDLNYLCTLCGKKFYRPSNLRQHMQRHGDDKPYTCPHCPKRFKCPSDRYIHLMSHQEGKNHVCQTCGARFSRVDTLHQHQILHTGEKRYKCDQCPMAFPRLMNLNRHLRTHTGEKPYKCKFCEKAYAQSNDLNKHLRTHVGENTYMCTQCPAAYKYQADLRNHEWEHYRLQKEAEQRAKDEASALKMKEEQTVMEVNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01259363;
90% Identity
iTF_00259945;
80% Identity
-