Bant001165.1
Basic Information
- Insect
- Belgica antarctica
- Gene Symbol
- lrrfip2
- Assembly
- GCA_000775305.1
- Location
- Belgica.7:7199-14883[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-108 2.8e-104 347.9 39.0 1 299 172 458 172 459 0.92 2 2 0.037 4e+02 -0.6 3.0 136 225 494 520 463 533 0.49
Sequence Information
- Coding Sequence
- ATGAGTGAAATCGAAGAACAGCGAGATCGGAATCCGCTTTATATCACTGAAGAAGATATTCCGCCAAAAACCGATAATGGCGATAACAGTAGCGATAACGATTCGAAAGGTGAACTGTTTGATTTCAGTTCTAGTGAGTCAGCGGACGGTGATGAAACAATACCTTTTGCAAAGCGAAATAGTCTGCAAATCGTTGAAGAGAAGGATCTGATAATGGAGAAAAGCGGAGACATGAACAACAACAGCGGAAACATACACCGACTGTCATTGCAAGTTGACAGCGGTGACGAGAATAGTTTGGTTTTGACAAACGAGGCGATAAACCGAACGATAATCAGAATCGGCTCAAATATCTCGACGACTGATTTCGGGGAACTGGAAGGGGACGAAGTAATTGATCCACCTCACGAAGCGATCAGTCACAAAGTCGAACAGAGTGTTCGAAGAAATAGTGAACACCTCACAGAGGATGGGGAAGGCATCGTCGATCTCTTGGGTCAAATAAACGACATAGCGGAAGCCCGATTAGCAGCAAAGCGACAAGCTCGAGCAGAGGCGCGAGAGATTCGTATGCGAGAGTTGGATCGGCAGCAGAAAGAGCTTGAACAAAATGCTGATCGAGTCTATGACATGCAACAATCCGAAGTTCTATCCACGCCGCGATCACGCCTAACCGTCAATAATAATTCGTCTGCAATTAGAGGAAATTCAATGTCGTCACGGCGAAGCAGCGAAGACTCCCTCGAGGAAGAGGGCAGAAGCCTGAGAGATCTTAGGCATGAGTTGAAGGATGTTGAAGAACGTTTCCGAAAAGCTATGATAACAAACGCCCAGTTGGACAACGAACGCTCCTCTCAGACATATCAAATAGATTTACTTAAGGACAAGCTCGAAGAAATGGAAGAGCAGTTCGCCCAGTTGCAACGAGAGCACCGCGATAAAACGCGGGCTCACGACGCTCTCAAGAGACAAAATGACAAACTTACGGAAGAGCTAAAGCTTGTGCAAGGGCAATTGAACGAAAGAGACAAGCTGATTGCAGATTACGGATTAGTTAtaattttagttgaaaacgAAGACGGCACCGATGCCAAACGCGTTCTAGtctcaaatgaaaatgctCAGCTTTTGGGAAGTGTTGAAGGGTCTATAGACGCACGACTTAAGAAATTCTCAGAAGAGAAACAAGAACTTCAGGTGGAAGTTCAGAAACTTCAACTGCAACTTAACGACGTCAAGAATCGAGGTGGAAGGCGATCAAGTTCACTCAATGGCAATTTAGATGACGATGACTACGAAGATGCGCAACGTGAAGCCAATAAAGCAATCAATGATTATAAATATCGTCTGCAGAAGGCTGAACAAGAAATTGCGAGTCTCCAAGCGACTCTAGCTCGATCCGAAACTCAGGTTATTCGATACAAAAGCACGGCGGAAGCTGCCGAGAAGGCAGAAGCAGACCTTAAgcttgaaagaagaaaattgcaacgCGAGAACCGAGAAACTATGGAGAAGTTGGAAGAGTTGGAGACAGCTAATAATCATCTGCTGAAACGACTGGATAAACTTAAAAATGCCAAAAGTGCACTACTCAAAGATCTTTGA
- Protein Sequence
- MSEIEEQRDRNPLYITEEDIPPKTDNGDNSSDNDSKGELFDFSSSESADGDETIPFAKRNSLQIVEEKDLIMEKSGDMNNNSGNIHRLSLQVDSGDENSLVLTNEAINRTIIRIGSNISTTDFGELEGDEVIDPPHEAISHKVEQSVRRNSEHLTEDGEGIVDLLGQINDIAEARLAAKRQARAEAREIRMRELDRQQKELEQNADRVYDMQQSEVLSTPRSRLTVNNNSSAIRGNSMSSRRSSEDSLEEEGRSLRDLRHELKDVEERFRKAMITNAQLDNERSSQTYQIDLLKDKLEEMEEQFAQLQREHRDKTRAHDALKRQNDKLTEELKLVQGQLNERDKLIADYGLVIILVENEDGTDAKRVLVSNENAQLLGSVEGSIDARLKKFSEEKQELQVEVQKLQLQLNDVKNRGGRRSSSLNGNLDDDDYEDAQREANKAINDYKYRLQKAEQEIASLQATLARSETQVIRYKSTAEAAEKAEADLKLERRKLQRENRETMEKLEELETANNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -