Bsom032575.1
Basic Information
- Insect
- Bedellia somnulentella
- Gene Symbol
- -
- Assembly
- GCA_963576735.1
- Location
- OY755192.1:5570293-5572558[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.1e-10 9.9e-07 29.7 0.3 4 39 16 51 15 57 0.84 2 2 0.59 8.3e+02 1.1 0.0 2 13 475 486 474 491 0.88
Sequence Information
- Coding Sequence
- ATGGAGCCTCCTCGTAAAAAACCGAGAGGACTTTGGACACTGCAACAGTTAGAAGCTGCAATGGCAGCTGTGCAAGGCAATTTAATGTCGCAACGTGCAGCAGCTGCTCGGTATTCTATCCCCAGAAGAACTTTAGTAAACCACCTCAAATCAGGTAAAGTTGAAAAACAAATAGGGCGTCGCACTATATTGACCGCAGAACATGAAAATGAATTGGCATCAAGAATAAAGAGACTTGCTTCCGTAGGGTTCCCTTTAACTCCAAAACGTATTCGTCATCAAGCATACGTATTTTGTGAACAGAACGAAATTTGTCATAATTTTaatcaaagaaataaaatggcTGGCAAAGAttggttaaaattatttttaaagagaCATCGCGATATATCAAAGAGGAAGGTTCAGATTTTAAATCCTGGTAGAGCACAAAAGCTAAATAAAGCTATTGTCATGCATCACTTTGAagagtacaaaaaaatatacgacGAACTAGAGATCGGAGATCATCCACACCGCTTGTATAATATGGATGAAAAAGGCTGTAGACTTACTATACACAATCAACCAATGGTATTAGCTCAAAAAGGAGTGAAACGAGTACATATGGTTGCACCAGAACATGCAGAAAATGTTACAGTGGCTGCCTGCGTGAATGCACTGGGTAATCCGATACCTCCGATGATAATATTTAAAGGAAAGAGGTTGAAAGCCGAATTCAAAGATAATTTGCCAGCAGGATCGCTCGTAAAAATGGCACCAAAAGGTAGCATGACTACCGCGTTGTTCATAGATTTCATACATCACTTGGGAAAATACAAATCACCTGGTAAGTGCTTGCTAATTTTTGATGGCGCCTCCTGTCACTTAGATTATCGTATTGTGGATGCAGCTGATGAGGAAGATATCGTGTTGTATTGTTTGCCTTCAAATACAACTCACGAGCTGCAACCATTAGACAAAAGCGTGAATAAATCGTTCGAGCACCACTGGGACGAAGAAACTTTGTTGCTATATCCCTATAATCCGGATGCAATCGCAGAAGAAGCCTATGCACCAGCTGTCTTGACGGAAATATTTCCGGCACAAGAACTTGACGTTTCCTCGCGAACTGATCCTTGTCTGCCACAAGCTCCATCTCCTGGTTTTTCCCATTTAAACGCAGACCGAAGAACACAAGATCATACTGGCACAAATTCTGActctaatgaaacatattattGTGAAGACAACAGTCCAAGTTCACCATCTTTACTTAAACGCAACGAGTTATCTTCTCCTGTTTTAGCTAACAGAGAGATACGTTTAGTCGATTACAGTTCGACCAATTCTGAATCCTCTAATTCAAACTTGTCCACAAAACCTGGCACATCTGGAGCTGCTATAAGACGGCCAATAATTTATAGCTCTGATTATGAATCAGATGAGTCTTTTACTGAAGCGCTAGCTATGTATCAAAGGCAACTACAGTCTAGCATAAACTTATACAGATCAtcagaaaatgaaaatatagatCCATTATCCCAACACCGTACTCCCGAAAAACACATGAAAACCTCAATTTTCAACACTGATATAAGAGAAGTAAGTCACAATTCTTCGACAAGCGATGGTTCAGAAGATAACGTACCATTGATAAGCTTTAGGGATAAAAAGGATGTTAAGTCAAAGTTTCATCAGCTACTTCCAACACCAAACTTAGCTGTAGTGAAACAAAAGCCAAGACGTAAAGCGATTAATTACAAAGCCCAAGTAGTAACCAAAGatttatttaatcaaaaaaatatagaaaaaccaAAACAGAAGGAGCAGCAAAAGCGGcagaataaagaaaagaaaccTCAACAAAACAAAGGAGATAAAAAAACAAGTCAGAcgaaaaaaaaagacaatcgAAAAGATAAGGCCAAACAATTTGAAAATGGCTCTGATGAAAGTGGGTcgaaaaaacaatttaaaaaaacaaacttaactAATAAGAGTGAGAAACGACAAATAGATGCTGATGACAAGTGGTACTGCCACGCATGTAACACAGAGAGTTTTGAAGACATGCGACAATGCCCGATGTGCCAAAGATGGTTCCATGAACAATGTTTGGGCTTAACAAAAGATGATGTTGATTTTGAATGTTCTAAGTGTGATTAG
- Protein Sequence
- MEPPRKKPRGLWTLQQLEAAMAAVQGNLMSQRAAAARYSIPRRTLVNHLKSGKVEKQIGRRTILTAEHENELASRIKRLASVGFPLTPKRIRHQAYVFCEQNEICHNFNQRNKMAGKDWLKLFLKRHRDISKRKVQILNPGRAQKLNKAIVMHHFEEYKKIYDELEIGDHPHRLYNMDEKGCRLTIHNQPMVLAQKGVKRVHMVAPEHAENVTVAACVNALGNPIPPMIIFKGKRLKAEFKDNLPAGSLVKMAPKGSMTTALFIDFIHHLGKYKSPGKCLLIFDGASCHLDYRIVDAADEEDIVLYCLPSNTTHELQPLDKSVNKSFEHHWDEETLLLYPYNPDAIAEEAYAPAVLTEIFPAQELDVSSRTDPCLPQAPSPGFSHLNADRRTQDHTGTNSDSNETYYCEDNSPSSPSLLKRNELSSPVLANREIRLVDYSSTNSESSNSNLSTKPGTSGAAIRRPIIYSSDYESDESFTEALAMYQRQLQSSINLYRSSENENIDPLSQHRTPEKHMKTSIFNTDIREVSHNSSTSDGSEDNVPLISFRDKKDVKSKFHQLLPTPNLAVVKQKPRRKAINYKAQVVTKDLFNQKNIEKPKQKEQQKRQNKEKKPQQNKGDKKTSQTKKKDNRKDKAKQFENGSDESGSKKQFKKTNLTNKSEKRQIDADDKWYCHACNTESFEDMRQCPMCQRWFHEQCLGLTKDDVDFECSKCD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00198056;
- 90% Identity
- iTF_00198056; iTF_00198053; iTF_00198055; iTF_00198057; iTF_01543834;
- 80% Identity
- -