Basic Information

Insect: Battus philenor
Gene Symbol: Hr39
Assembly: GCA_028537555.1
Location: JAQMYT010000005.1:3494942-3514136[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.45 3e+03 -2.2 0.5 114 185 79 150 20 192 0.53

2 5 0.54 3.6e+03 -2.4 1.2 69 155 121 205 68 238 0.40

3 5 4 2.7e+04 -6.1 6.6 101 154 273 328 261 362 0.51

4 5 1.1e-07 0.00077 19.5 0.1 1 20 446 465 446 479 0.91

5 5 1.6e-65 1.1e-61 210.1 0.0 164 408 507 760 468 760 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.45	3e+03	-2.2	0.5	114	185	79	150	20	192	0.53
2	5	0.54	3.6e+03	-2.4	1.2	69	155	121	205	68	238	0.40
3	5	4	2.7e+04	-6.1	6.6	101	154	273	328	261	362	0.51
4	5	1.1e-07	0.00077	19.5	0.1	1	20	446	465	446	479	0.91
5	5	1.6e-65	1.1e-61	210.1	0.0	164	408	507	760	468	760	0.84

Sequence Information

Coding Sequence: ATGAATACAACAATGTCGAGTGAGGGTGACTCGGTGAAGGTGGAAGGGGGACACGTTTCTGTCACCACTATCAGCATGTCGGGCCCGGAGACCAGCAATGGTCAATTCTCATACAGTTCGAGTGGAGTGCGCATCAGCGTGTCTTCGGTACCCCATGACGAAGATTCTACTGATGCCGAAATCTCCAAGATCGACTTTACACAACACCAATACGAGGTTAACATGCGAAACAAAAAGAAGCGCTCGTCTAGTGGCGTACAGTGTGAGGGCCAGAGCATCGAGAGGGAGCGCCCGATGTCGTGGGAGGGCGAACTGTCGGACTCCGAGATGGTGATCGATACCAGCGTCAATAACGATGAAAACAGCAATTCTATAGACATGCAATCATCCCGTGATTCGATTGACACTCTACGAAACGTAACCATCAAAACGGAGCCATCTAATACGGAAGCCTATCAAAGCCTGGACGACCAGAGCGTGCTAGACCTCAAATATTCCGTACCGCTTCAATCGCACCAGAGGAGTTTGAGCATGAACAGGATATCGGTCCTCACGGATAACACATCCTTGTCTCTCTCACGGCGGCCGTCATCCCCAACGAACAGCGCCAAGTCTCTGGGCCCTAACGATCAGTCCACGGCGCCGCTGATGACTCCTGGGATGTTGGGTGAAGCGCAGAATCTGATCATTAAGAAGGAGACACAATTGTCAGAGTTGAAGTGTGAGCCGGGTGTTGGTATGGAGAAGCTGCTTGGACTACATGGGTCACCGTTGCTCGGGCGGTTGCCGCGAGTGCAATCCAGTGCCAGCACCGACTCCGCAGTGCATTCCATGTATACACATAGTGTGTACAGTAGTCCGTCAGCGAGTCCGCGACCGGCGCGACACTATACGCCGTCTCTGTCGCGCAACAACAGCGACGCTTCGCACTCCTCCTGCTACTCCTACAGCTCCGAGTTTTCGCCCACCCATTCGCCAATACAGCAGACTCGGCAGCCCCACATCGTGTACCGCGATGCGACGGCTCTGTTCCCCGCGTCGCCGGCACACGACGAGGATGTGGACCCGGCGGACGAGCGCCTACACCACCACCAGGGTATCAGTCGGCAGCAGCTTATTAACAGTCCTTGCCCCATATGTGGAGACAAGATCAGCGGCTTCCACTACGGTATATTCTCGTGCGAGTCCTGCAAAGGTTTCTTCAAGCGCACCGTACAGAACAGAAAGAACTACATGTGCTTACGTGGCGGCAACTGTCCTGTCACCGTGGCGACGAGGAAGAAGTGTCCGGCATGTCGCTTCGATAAGTGCCTATGTTGCGGCATGAAGCTTGAAGCGATCCGTGAAGACCGAACTCGGGGTGGACGATCGACGTACCAGTGCTCATACTCGCTGTCGGGGGCGGCGTCCACCGGCTCGCTTCTTTCGGCGCATGTTCCGCCGCTACGCCACGCCTCCAGCCTCACCTGCGTCAACGGTCCAGGATCATACAACAGCCGAGGCGAGGCCAGTAACAGTCGGTTGACGCCAGAAATTCCTCCATTATTGCAGGAAATAATGGACGTGGAGCACTTATGGCAGTACAACGAATCGGAACTCAGCCGGCTGGGCAAGTCCACGGGCGCAAACCCACTGTTGGCCGCCAGCGGTATCACGGCGCACACCTCCAGCGCGGACCTGCTCGCAGATCTCTGCCACATTGCAGATCACCGACTCTATAAGATCGTCAAGTGGTGCAAGAGTCTGCCGTTATTTAAGAATATATCGATCGACGACCAGATCTGCCTGCTGATCAACAGCTGGTGCGAGCTGCTGGTGCTGTCGTGCTGCTACCGCGGCGTCAATACCCCTGGCGAGGTGCGCGTGGGTGGCGGACGAGGTATCACCTTACACCAGAGCGCCAAGTTTGGCCTCACACCGTGTATAGAGCGCATGCTGAGCTTCACAGACCACCTGCGGAGGCTGCGGGTCGACCGGTACGAATACGTCGCACTTAAGGTCATCGTACTTCTCACTTCAGATGCGCCCGAGTTGCGCGAAGCAGAGAAAGTGCGTGCGTCCCAGGAGAAAGCTCTGGCGGCACTGCAGGCGTACACGGCCGCGCACTCGCCCGACACGCCCGCCAAGTTCGGCGAGCTGTTGCTGCGTATCCCGGAACTGCAGCGCACCTGCCAGTTCTTCATGCAAGTCGGAAAAGAAATGCTCAATCCGGCCAACAAGAGTAAAGACGGTGACGGTCCGAGCTTCAATCTACTCATGGAGTTGCTACGCGGCGATCATTGA
Protein Sequence: MNTTMSSEGDSVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSVPHDEDSTDAEISKIDFTQHQYEVNMRNKKKRSSSGVQCEGQSIERERPMSWEGELSDSEMVIDTSVNNDENSNSIDMQSSRDSIDTLRNVTIKTEPSNTEAYQSLDDQSVLDLKYSVPLQSHQRSLSMNRISVLTDNTSLSLSRRPSSPTNSAKSLGPNDQSTAPLMTPGMLGEAQNLIIKKETQLSELKCEPGVGMEKLLGLHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRPARHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQQTRQPHIVYRDATALFPASPAHDEDVDPADERLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLCCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLSAHVPPLRHASSLTCVNGPGSYNSRGEASNSRLTPEIPPLLQEIMDVEHLWQYNESELSRLGKSTGANPLLAASGITAHTSSADLLADLCHIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVNTPGEVRVGGGRGITLHQSAKFGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTAAHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKSKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00958006;
90% Identity: iTF_00922930;
80% Identity: iTF_00197443;