Bphi025798.1
Basic Information
- Insect
- Battus philenor
- Gene Symbol
- egg
- Assembly
- GCA_028537555.1
- Location
- JAQMYT010000020.1:5711031-5738414[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7 7.3e+03 -2.8 0.0 28 38 1261 1286 1249 1287 0.63 2 2 9.1e-12 2.4e-08 34.0 0.0 4 69 1318 1376 1315 1384 0.82
Sequence Information
- Coding Sequence
- ATGGATTCTACAAATAATTTAGAAGAAAATTCGTTCGGCGACCACACTGAAAGCATAAATATGTCTGAGCGAAAAGAAGAAATGGATTCAAATACATCAGTCGAAGATACAACTTCAACGAAAAATATTTCTGAAAAACTAGCTCTGAATATTGAGAGTATCCCTGAAGATTGTACCTCTTGTAACACAGCAAATGTACCTTCTATAGACGATAAAATTTTGAACAAAGCAATACCCAGTGATCAAACTGAAAAAAATGTTTTAAATCCTTCTGTTGTGTCTGATTTAATATCAGAGCCTACAGAACAAATTAGTTGCCATATATCCTCCATTGATAAACCATTTGAACAACATTTAGATGCTGTATCAGATAATGAGGCCTTTATGAAAACATTTCCAGATGAAGATGTTTGTAGTGACACACAAGATGAAGAGATTCAGTTAAGATGGGATGATGATGATGATGATATAAACATACACAACAATGATCTACCAGAACATAGAAAAAGTGTTACAGTTGAAAAATCACAAAGTGAATTTATTGAAGGCAAGCAAAATGATACAACAAGTGAGGGAAAGCCAGACCAAGCTTCACCAGATAGTTCTAAAGAAGGAGATAAAGGTATAGTGATTGATTGTGAAAGCATTGTTACTCAACATGGTTTGAAGAAACCTGATATGATGTTAGAAATACCATCGCAAGAATTAATTGACTTCATGGATGATGATGAACCTGACCTATTAGATAATTTAAAAATGTCTCCTGATAATGAAGGTATTGAGATCCTTAATGATAGTATTTCTGATGAAAATACAAATGTATCTCAAGGTAATGAAACAGAAGCAGCAACTAATGAAGATTTACAATGGGGAAGTACAAATGTTAAATCATCTATTGAGGAATGTCAAGACGAGATGACTGAAACCGAAAATAAACATGGAACTAATATTGGCCCACTTGACAAAGACCAAAAAGAAATTATTTCTATAATAACACCTCCAAATGTTATTGCTGAAAATGAAAATTCAGAAAAAAAAAATTATCCCAATGAAGAGCCACAACCATCAACTTCGCAAGCTTGCATGATTACAGAAATGAGAAGAGACTCAGATGAAGTTGGTGAGGTGTCTGATAGCTTAGGTCTCTTGGCTGAATCAACAAGAGTTCTGGAGGATGATGAAGAGCCAGAAGATGAGGATGATGAGGATGACAATGATGATTATGATCAATATGAGGAGAGTAGCAATCAAATGGGAGCTGAATATTCAGAAGATTCTAATGCTCTAAACTCTGAAACTGATACTGTAAAGGCTGGACAGGTAGAAACTGATAATGTTGAAGAAGGTAAAGAAACTGACAAAACAGAAACTGCTACAACAGAGCAAGATAATGAATCATGTACATTCCATATAAGTGATATCAAAACACAAGATGATAGTAGTAAAGATGCCGAAGAAAGTATAGAACCAATGGATTGTGAGGATGTATCTATGACAGTTGATCAGGATGTAAACCAAGTGTCAAAAGAAGAATTATGTCCTCAGACAGTTCCAGATAAAGTATTGGATCAAATAAAAAAAGAAGTAATGGAACAAGCAACAGATGAAGTAGTGGAACAAGTACCGGATGAAATATGTACAGAGAGTATTGATATAGATAAAGATGAAGATAAAGCTGAGATTGCGTTAAGCGAACAACCCACAGAAGAAGAACGAATAAACCAAAGCCATTTTATTCCGAACGAAGCAGATGCACAAACTGAAAATGAAAATGAATCAATTTTGGGCAAGGATGACAATGTGGTTCTATTGGAAAGCTCTTCGGAAGAAGATATTTCGGACGAAACTGAAAAGATTTCTTCTAATCAAGAAGAGGACACTCCTATCGTCTGTGAAGATATTTCCAATACTAATTCATTACAACAGTCAGAGGACGCTATAGGTGTAGAAACTGATTTAGTTATGAAAGAATCGGAAGAAACAAATAAGCTCACTTCACTCAGTGATAAGCTACGATCAGCGGTGGGTTTAGAAGTATTCAATGTAGACTCGGATGATGAGGTGGAAATGCTTTCAAAAGATGACGAAGCTGATGTAGATGACTTCGAGACGCTGCAAGAGGTCAAATGTGTTAACTTTGCCTGTGACAATCCATCAGACGTTCAGTACTATGAAGCCGACATTACGGTGTTAAAATATTATGAAGGGGATAGAAGCAAGAAGGCGGCTGTTTGTGAAAACTGTGCCAATAAAGTTGCCAAGAGGAATGAGGAATTAATTGAAGGTATCAAAACTAATATACCACTTTTGGACCTGGACACGGGAAAGACTAAGCAAGAGTTAGTAGAGATATCCGACTCCGAGTCTGAAGATGAAGAAGAGTCAGTAGAAGATAACAGAGAAAAGATCGGGCCAAATGGCGCTAAAATAATTGAAGAAATACTGGCTGACATGATCAATGATACTTGGGTGAAGTTTAAAATGGATTCCCGACTCGACGACGCTCAAAATGTTTTACAGCAAGAGTTGAATCGTTTGGATTCGGAAAATAAAGAAATAAACCAGATGCTAAACGAGTGTCAGGTGGAAACCGACAAGCTGCGCAACGAAGTGTACTCGACATTTGGACAAGAGCGCAAAGAGTTACCGGCCATCGTAATATTGGACACGAACACCAGTGCGTATCAATGTCACTACGAGGAGTACATACACGAAAAAGCGGAGGTACCGCAATTACGTCCGAAGCGACGCGCGACTACAAACAGTGAACCGCCGGCCAAAAAGATTGCCGCTGTGACTGCACATAACTTGGAGAAAGACAAGTATAAACAGGAAGTGAAGACTGAACTGAACACATTGGACGTGGTTGACGACGATAATGTGGAAGTAGCAGTGGTAAAATTGTCAGCGGAGTCCGCACCTGCAGACCTCCCACCGCCTGGTGAAGTGTCTCGGCCGCCGCTTCGAATCGGTATGACGGTATACGCAATGAGAAGCAACTTTGGAATTTGGCTCAAAGCGAAGGTCGTCGAGCTACAATCTAAAAATTCGTCATCGTCACCTTTCACGATGTGCCTCGTTAGATTCGAGCACAAGGTTAACAAGAATCCGTTCAAGCTCCTACCGGCGCGCTGTCTCGCATTTTCAGAGCCAGCGGACGTTAGGCTCACTATAGGAACCAGAATAATTGCAACATCTGAAAAACGTGAGACATTCTATTCTGGCGTCGTGGCGGAGGTTCCGAACCCGGTAAATAATTACAGATATCTAGTATTTTTCGACGACGGGCACGCGAAATACGCACGGCATTCAAACACACGTCTGGTCTGCGAATGCTCGCCTTTGGTTTGGGAAGAGGTGCATCCCAACTCGCGGGACTTCGTGCGTCAGTACTTGTTGTCATATCCCGAGCGGCCCATGGTGCGTCTTCATCCCAAGCAAACCGTCAAGACGGAGTGGAACGGCAAATGGTGGAACTCTCGTGTGATGGGGGTGGACGCGTCACTCGCGCTGATAAATCTAGCAGGCGACAGGCTAGAGTGGATTTACCGTGGCTCCACTCGTCTCGGGCCCCTGTATCTGGAGTTCCAGGCTGCTGAGCGTCAGCGAGCTAGACCCATGCCTCGCTCTGGTCCACAACATCGGACGAACATGCCGTACGTGGAGTACACCCGCTACGACGAACCTCAGCCGTCTAAGTCTCCGACCGGTCAGACGCCTCAACAGAACGAAGAAATGCGACAACAGCGTGCGGTAGCGAAGAAATCAACAGCATCCAGTCAAATACCGCCTCCAGCCCCGCCGGCTGCCGCAGGGAATTTGGACAATGTCACCAGTAGAGTTGTGTACTATACGCCGAAGAATGCAATTCGCCCGTACAAGATGGTACCGCATCAGTGCGGACCCAAGTGCAGGCGCACCGACGTGTTGGCGCTCAAAGAGCTGAGGACGTACAATCCGTTGGCCAAACCGCTGCTCAGTGGTTGGGAAAGGCAAATAGTTCGTTTCAAAGGACACAAAGAAGTGTTATACCGGGCGCCTTGCGGACGCCGGCTGCGAAATATGGCCGAGTTGCATCGCTACTTACGCACGATCAAGTCCGACATGCCCGTCGACTTGTTCGACTACGGACCCTCGACTCATTGCCTGGCGGAGTTCGTGCTCAACAAGTGTCTCGTCGGCAAAAAGGACCTGTCGCACGGCAAAGAAAACGTGCCGGTGCCGTGCGTGAACTATTACGACGAGTCGTTGCCGGAGTTCTGCTCGTACAACACGGAGCGCACGCCCACCGCCGGCGTGCCTCTCAACCTCGACCCCGAGTTCCTGTGCGGCTGCGACTGTGACGACGACTGCGCGGACAAGAGCAAATGTGCTTGCTGGAAAATGACCTTAGAGGGAGCTCGAACGATTGGCTTAGAAGGCGACGTGGGCTACGTGTACAGGCGGCTGCCGGAGCCGTTGCCATCTGGGATATATGAGTGTAATTCCAGATGCAAATGTAAAAGTACATGTTTGAACCGCGTTGCACAGCATCCTCTACAATTAAAACTACAAGTGTTTAAAACCCTGAACCGTGGATGGGGTATAAGAGCTCTCAACGACGTGCCAAAAGGTGCCTTCCTTTGTGTTTACGCGGGAAATTTACTTACCGACGCTACGGCCAATTTGGACGGACTCAATGAAGGCGACGAGTATCTCGCGGAACTGGATTACATTGAAGTTGTGGAGCAGATGAAAGAGGGCTACGAAGAGGATATTCCAGAGTCCCTGAAGGAGCCTTCAAGGAGAAGCTCAACAAAAGATTTCTCGGAGGATGAAGAGTCATCATCGGAGGAGGAGGAAATTAGACTGTCGAAAGACGAAAGAGATGATGACTTCCAGCCCGGTTACGTCGAAGTCGGCCCTATGGAGTTTAATAAACGATTGCGTACACGACAAAAACGCAAAAAAGAGAAACAAAACGATGAAAATGAAATGGAAGAAGAAAAGAAAGAGGAAAAGAAAGAAGACGAGAAACCTGAGAAGCAAGAAGAAAAACAAGTAGGGAAACAAGAAGAAAAAGAGGGAGAAAAAGAAAATGCTGAGGAAGATTGCATAACTATAAGTGATGATGAAGAAGTGAGGGAGCCATCACGGTTTACGGCACAAGCGGGAATGGATGCAAAACAATTAGTCTCAAAATATAGatcggttcgttcgtatttcggcaaggacgaggcgtgctacatcatggatgcaaaggtccaaggcaacatcggtcgttatctcaatcactcgtgctgcccgaacgtgttcgtacaaaacgtgttcgtggacacgcacgacccgcggttcccgtgggtggcgtttttcgcgctgtcgcatattcgcgcgggaactgaactcacttggaactacaactacgacgttggttccgttcccggaaaggtgctctattgctactgcggtgccgtcaactgccgtggacgccttctttga
- Protein Sequence
- MDSTNNLEENSFGDHTESINMSERKEEMDSNTSVEDTTSTKNISEKLALNIESIPEDCTSCNTANVPSIDDKILNKAIPSDQTEKNVLNPSVVSDLISEPTEQISCHISSIDKPFEQHLDAVSDNEAFMKTFPDEDVCSDTQDEEIQLRWDDDDDDINIHNNDLPEHRKSVTVEKSQSEFIEGKQNDTTSEGKPDQASPDSSKEGDKGIVIDCESIVTQHGLKKPDMMLEIPSQELIDFMDDDEPDLLDNLKMSPDNEGIEILNDSISDENTNVSQGNETEAATNEDLQWGSTNVKSSIEECQDEMTETENKHGTNIGPLDKDQKEIISIITPPNVIAENENSEKKNYPNEEPQPSTSQACMITEMRRDSDEVGEVSDSLGLLAESTRVLEDDEEPEDEDDEDDNDDYDQYEESSNQMGAEYSEDSNALNSETDTVKAGQVETDNVEEGKETDKTETATTEQDNESCTFHISDIKTQDDSSKDAEESIEPMDCEDVSMTVDQDVNQVSKEELCPQTVPDKVLDQIKKEVMEQATDEVVEQVPDEICTESIDIDKDEDKAEIALSEQPTEEERINQSHFIPNEADAQTENENESILGKDDNVVLLESSSEEDISDETEKISSNQEEDTPIVCEDISNTNSLQQSEDAIGVETDLVMKESEETNKLTSLSDKLRSAVGLEVFNVDSDDEVEMLSKDDEADVDDFETLQEVKCVNFACDNPSDVQYYEADITVLKYYEGDRSKKAAVCENCANKVAKRNEELIEGIKTNIPLLDLDTGKTKQELVEISDSESEDEEESVEDNREKIGPNGAKIIEEILADMINDTWVKFKMDSRLDDAQNVLQQELNRLDSENKEINQMLNECQVETDKLRNEVYSTFGQERKELPAIVILDTNTSAYQCHYEEYIHEKAEVPQLRPKRRATTNSEPPAKKIAAVTAHNLEKDKYKQEVKTELNTLDVVDDDNVEVAVVKLSAESAPADLPPPGEVSRPPLRIGMTVYAMRSNFGIWLKAKVVELQSKNSSSSPFTMCLVRFEHKVNKNPFKLLPARCLAFSEPADVRLTIGTRIIATSEKRETFYSGVVAEVPNPVNNYRYLVFFDDGHAKYARHSNTRLVCECSPLVWEEVHPNSRDFVRQYLLSYPERPMVRLHPKQTVKTEWNGKWWNSRVMGVDASLALINLAGDRLEWIYRGSTRLGPLYLEFQAAERQRARPMPRSGPQHRTNMPYVEYTRYDEPQPSKSPTGQTPQQNEEMRQQRAVAKKSTASSQIPPPAPPAAAGNLDNVTSRVVYYTPKNAIRPYKMVPHQCGPKCRRTDVLALKELRTYNPLAKPLLSGWERQIVRFKGHKEVLYRAPCGRRLRNMAELHRYLRTIKSDMPVDLFDYGPSTHCLAEFVLNKCLVGKKDLSHGKENVPVPCVNYYDESLPEFCSYNTERTPTAGVPLNLDPEFLCGCDCDDDCADKSKCACWKMTLEGARTIGLEGDVGYVYRRLPEPLPSGIYECNSRCKCKSTCLNRVAQHPLQLKLQVFKTLNRGWGIRALNDVPKGAFLCVYAGNLLTDATANLDGLNEGDEYLAELDYIEVVEQMKEGYEEDIPESLKEPSRRSSTKDFSEDEESSSEEEEIRLSKDERDDDFQPGYVEVGPMEFNKRLRTRQKRKKEKQNDENEMEEEKKEEKKEDEKPEKQEEKQVGKQEEKEGEKENAEEDCITISDDEEVREPSRFTAQAGMDAKQLVSKYRSVRSYFGKDEACYIMDAKVQGNIGRYLNHSCCPNVFVQNVFVDTHDPRFPWVAFFALSHIRAGTELTWNYNYDVGSVPGKVLYCYCGAVNCRGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -