Bbre006662.1
Basic Information
- Insect
- Baronia brevicornis
- Gene Symbol
- dicer1
- Assembly
- GCA_031353405.1
- Location
- JASFAT010001573.1:1-5798[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.031 3.1e+02 0.6 0.4 122 139 226 243 188 246 0.46 2 2 2.6e-23 2.6e-19 69.8 6.9 88 138 247 297 234 297 0.94
Sequence Information
- Coding Sequence
- atgaaattttctcAGGAACGCAGATCTCTTCGAGTCAATAGAGAAAACTACCAGTACACAATTGTCACGCCGTGGTATAGAGCTAAAATTTTACCAGACagATACGTTGTGTCCGATGTCCTCGAGTATATGACAGCACAATCTTTATTCGATTCCGATTCCTATGAAACATACGCCGAGTATTATGCgagtaaatataacttaaatatagaAGGAAGAAAGGACCAACCGCTCCTAGAGGTACGTAACATAAATACGAGAATGAACTGTCTACTACCTAGGGCGCCAACAATTAAGTCTTTTACTGAGAAGCAACAGAAGCTTATATCGGCGGCTCAAGGTGAAGATAAACCAAAGGGATTTTCGGAAATCTTTATACCAGAATTTTGCATCAAATACGACTTCCCAGCCGTGCTTTGGTACAAAGCGACAATGCTGCCAAGTATTATACACAGGGTCTTTATGTTATTGGTGGCTGAGGAACTACGTGCCGAGATCGCTGTTGCCACCCAATATGGCCAACCTGTTTTACCAAAAGgtgaAGAATGGCTGCCATTAGAAGCCAACATGACAATAGTTATGAAATCGCTGTTAGCCCAAGTTGAAAATCAAGAAGAACAAAATAATGCACTCAAAAACAATTACGACAgAATTAACAATCCCATAGATGAGGTAACTCGAAAACCCAAAATAATGACCATGAAGGAGAGTGTATATCAGCTACAAAAGCAAATATCGTTACAGCACGAGCTTAAAGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATTCTGAACGCGCAGTTAGACAATGACAAGGCGGCGCTCAGCTACCAGCTGGAGCTGTTGAAGGACCGGCTCGAGGAGCTGCACGAGGAACACGCACAGTTACAG
- Protein Sequence
- MKFSQERRSLRVNRENYQYTIVTPWYRAKILPDRYVVSDVLEYMTAQSLFDSDSYETYAEYYASKYNLNIEGRKDQPLLEVRNINTRMNCLLPRAPTIKSFTEKQQKLISAAQGEDKPKGFSEIFIPEFCIKYDFPAVLWYKATMLPSIIHRVFMLLVAEELRAEIAVATQYGQPVLPKGEEWLPLEANMTIVMKSLLAQVENQEEQNNALKNNYDRINNPIDEVTRKPKIMTMKESVYQLQKQISLQHELKEVEEKFRKAMILNAQLDNDKAALSYQLELLKDRLEELHEEHAQLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -