Bbre009919.1
Basic Information
- Insect
- Baronia brevicornis
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_031353405.1
- Location
- JASFAT010002170.1:13635-21973[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-76 2.1e-72 244.1 16.2 1 261 302 570 302 594 0.90 2 2 2 2e+04 -5.9 17.8 1 48 597 643 597 673 0.73
Sequence Information
- Coding Sequence
- ATGGGGGAAggctttgagcttgtgaaatGTGATAGTAGTGACGAGGAGAGTGGAGATGCGTTCACTGACGACGACTTCGGCGACTCCGACGGTGAGACGGCGGCTGTCAGCGCCCAAGTCGCGGGCCCCCCACTCAACGAGACCATTAACGTGGCCATCACGACGGCGAACGAACAGGGTCCAATGTTTGCGGACGGCGAACCCCTAACCAACGGACGCTGTGCAGCGAAAGCAGCCGACATCGAAAACGGGGACAGCTCCGATGTGCACGACGTGGACACACACACCGAGTGTGCGTGGAGTGAGGCGCGCCAGGGCTCCGACTGCAGCCCCGACCCCGACCCCGACTCGATACTTGAGTTACTCGTCGATCAGCACAGCCACTGTAGCGTTTGTGACGTGATACGTTGGTCAAGTGGTTCGTTTGTTTGTTGTCGCGCTGTCTGTTTGCGTACGCGAGACGTGACCGGCTGGCACGGGTGTAGTGGACCGAGGTCTAGTGGGTCACACGGAATATTGTCAGTGCGATCCGCGGTCCGGTCCGCAGCGGTGTTAGGGCGCCTCGATTTGCGGCATTACTCCGCGGAAACTGAGCGGAGCTGCTGCGCTGGTGTTTGCCGTGCGCGGTGCGCGGTGTGCGGTGGATGGAGCTCGCCCTGCGCGCTCTCGGTacgctgctgctgctgctgctccACGCGAGTGAGTGCAGACTCACTGACGTCAGACGGTGGCGGTACCTTTTGCTGTGCGCTCACACTGAATTGGACGCGTTCACACACGCCGCGACGGCCGCGACGCGAATACTACGCGCCGCCCGTAAATGCACCGCGCCGCAGCGGAGATGCCGCGCGTGCGCTTTGTTCGCGCGATGGACGCGCGCTGTACACTGTCGGTGTCCCGCCGGCGGAGCAGCGGCTGGCGGCGCGGCGCGCGGCGCGGGCGGAGGCGCGCGAGATACGGATGCGCGAGCTGGAGCGCCAGCAGCGCGAGCAGGAGGACCACGCGGACAAGGCCTACGACATGTACGCCGAGACGGTGGGGCGGCGCGGCGCGCGGCTGGCGGCGCTGACTCCCGCCCTGCACCCGCCGCACTCCCCGCGCCGCAGCTCCGAGGACTCCGCCGACGACGTGTTCAGCGTCAAGGACCTCAGGCACGAGCTGAAAGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATTCTGAACGCGCAGTTAGACAATGACAAGGCGGCGCTCAGCTACCAGCTGGAGCTGCTGAAGGACCGGCTCGAGGAGCTGCACGAGGAACACGCACAGTTACAGCGCGAGCACCGCGACAAGTGTTCGTCGCACGAGCGGCTGCGTCGCGAGCACGCGGCGCTGGAGCGCGAGCTGGCCGCCGCCCGCGACGCCGTGCGCGCGCGCgacgccgccgccgccgccgccggccTCGCCTTCGTGGAGGCCGCGCTCGCGCCGCCCACCGCGCCGGGGGGccggggggagggggagagccCGCCGCCCGCGGCGCAGGGCTTCGGCAGCGTGCCGCCGCTGGCGCTCGTCTCGCACCGCTCCGAGCAACTGCTCAACGACGCCGGGGAGGGCACGCTGGACGTGCGGCTGGAGCGGCTGGTGCAGTCGCGGGCGGCGCTGGAGTCGGAGGTGCGCAAGCTGAAGCTGCAGCTGAACGAGGAGCGCGCCGCGCGCCACAACGGCGTGGCGGCCGCGCACGACGCCGACCTGCACGCCGAGCTGGAGGCGCTGCGCAAGTCGGCGGGCGAGGCGAAGGCGCGGGCGGCGCGCGCGGAGGCCGAGGCCGCTCTGCAGGCGGCGGGCGCGGCGCGACTCGAGGCGCAGCTGGCCAGGCTGCGCGCGCGCCAGGAGCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGGCGGCTGCAGCGCGAGGCGAGAGAAGCTCTAAACCGGGTGGAGGAGTTGGAGACCGAGAACAGCCACCTGACGAAACGGCTCGACAAACTGAAGAACGCCAAGTCCGCGCTCCTCAAGGACCTGTGA
- Protein Sequence
- MGEGFELVKCDSSDEESGDAFTDDDFGDSDGETAAVSAQVAGPPLNETINVAITTANEQGPMFADGEPLTNGRCAAKAADIENGDSSDVHDVDTHTECAWSEARQGSDCSPDPDPDSILELLVDQHSHCSVCDVIRWSSGSFVCCRAVCLRTRDVTGWHGCSGPRSSGSHGILSVRSAVRSAAVLGRLDLRHYSAETERSCCAGVCRARCAVCGGWSSPCALSVRCCCCCSTRVSADSLTSDGGGTFCCALTLNWTRSHTPRRPRREYYAPPVNAPRRSGDAARALCSRDGRALYTVGVPPAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGARLAALTPALHPPHSPRRSSEDSADDVFSVKDLRHELKEVEEKFRKAMILNAQLDNDKAALSYQLELLKDRLEELHEEHAQLQREHRDKCSSHERLRREHAALERELAAARDAVRARDAAAAAAGLAFVEAALAPPTAPGGRGEGESPPPAAQGFGSVPPLALVSHRSEQLLNDAGEGTLDVRLERLVQSRAALESEVRKLKLQLNEERAARHNGVAAAHDADLHAELEALRKSAGEAKARAARAEAEAALQAAGAARLEAQLARLRARQEHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -