Basic Information

Insect: Balanococcus diminutus
Gene Symbol: -
Assembly: GCA_959613365.1
Location: OY390716.1:33924452-33926494[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 5.2e-06 0.0004 20.9 1.6 1 23 213 235 213 235 0.99

2 14 2e-05 0.0015 19.0 1.0 1 23 240 262 240 262 0.98

3 14 1.2e-05 0.00092 19.7 1.5 2 21 270 289 269 290 0.93

4 14 0.022 1.7 9.4 0.2 1 23 295 318 295 318 0.97

5 14 0.0032 0.25 12.0 0.1 2 23 341 361 340 361 0.96

6 14 4.4e-05 0.0034 17.9 0.0 1 21 367 387 367 388 0.95

7 14 5.6e-07 4.3e-05 23.9 0.5 1 23 395 417 395 417 0.98

8 14 0.00035 0.027 15.1 0.3 1 23 427 450 427 450 0.97

9 14 2.5e-05 0.0019 18.7 1.6 1 23 458 481 458 481 0.97

10 14 0.0012 0.092 13.4 0.7 1 23 488 511 488 511 0.92

11 14 0.00017 0.013 16.1 0.2 1 20 568 587 568 588 0.96

12 14 0.0068 0.53 11.0 0.1 1 23 596 619 596 619 0.90

13 14 0.016 1.2 9.9 4.1 1 23 624 646 624 646 0.94

14 14 0.33 25 5.7 0.8 5 22 655 672 653 672 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	5.2e-06	0.0004	20.9	1.6	1	23	213	235	213	235	0.99
2	14	2e-05	0.0015	19.0	1.0	1	23	240	262	240	262	0.98
3	14	1.2e-05	0.00092	19.7	1.5	2	21	270	289	269	290	0.93
4	14	0.022	1.7	9.4	0.2	1	23	295	318	295	318	0.97
5	14	0.0032	0.25	12.0	0.1	2	23	341	361	340	361	0.96
6	14	4.4e-05	0.0034	17.9	0.0	1	21	367	387	367	388	0.95
7	14	5.6e-07	4.3e-05	23.9	0.5	1	23	395	417	395	417	0.98
8	14	0.00035	0.027	15.1	0.3	1	23	427	450	427	450	0.97
9	14	2.5e-05	0.0019	18.7	1.6	1	23	458	481	458	481	0.97
10	14	0.0012	0.092	13.4	0.7	1	23	488	511	488	511	0.92
11	14	0.00017	0.013	16.1	0.2	1	20	568	587	568	588	0.96
12	14	0.0068	0.53	11.0	0.1	1	23	596	619	596	619	0.90
13	14	0.016	1.2	9.9	4.1	1	23	624	646	624	646	0.94
14	14	0.33	25	5.7	0.8	5	22	655	672	653	672	0.93

Sequence Information

Coding Sequence: ATGGCTGAAATACGGCACGATTATAACGGCGATTCTACTATTTGTAGGTATCAAGTGACCGAAGTTGTACTCGACcgaccaccaccaccacaacaacaacaaaacacCCCCAACGAGAGGAGAAATCGCATTGTAGACTCGGTGGCATTGGCACAACCCCATCAGAACCGCAATTCGCAAGGTACTTCCGGCCCAGAGCCATCTTACAGCCTAGACGCGCATAGCGGCCTTCCGCAAGAAATGGTCTACATAAGTTGTAACGAGTCGACGTCCCACGGGATGGCGGTCGACGACGATACGCTCGAATCTGGCGACGAAAAGCTGGTCGATAATTATATCAAAGAGGAAGATATGCAGATTGACGACGACAACGGCGGTGagtcaaaagaaaataataaaatatttcccgACGAGTACGAGAAATTCGTCGTGCAGTATAATAAAACGAGCATTAAATACATGCAATGCGACAAATGCCAGTTCATATGTCGACCTTTGAcgcatattttcgaaaaacactacAAGACCCATTTCGACGACCCGGATATCGACGAGAAACCcgatataaatattttacagCAGATGACCGAATCCGCTGCCACATCGTCTGAGACAGTCGAACAGCCCGAGCAAATATTCAAGTGCGATATTTGTAACGCCTCCTTCAGTACAGAACGGTCTCTGCATGCTCATCAGAAAATCCACCGAGCCAGGGTGTTCTCCTGCCCTTTGTGCGGGCTCATTTACAAAACCAGGTTCGAACTGAAGGTCCACAAGAAGACTCACGCCTCGCAGGTCCTCTCGTTGGTCTGCAACATGTGCGGAAAGACCTTCAAGACCAAATCCGGATATAATCACCATCGTAACAACGTCTGCGTCGAGTACAAATGCGAAATTTGCGGGGATATGTTCCTGGTCAAGTCTGTGCTGCAAGATCATCTGAAAAAGGTGCACGATATCGAAGAAGATATCTCGGTAGCTGAGCCCGAACCACCGCCGAAGAAAGAGCAAGCCAGCAGCGTGTGCCCAATTTGTGGCAAAATGGTCACCGAGAACGCCCTGTCCAGGCATTTGAATTTGCATTCCGAAGATAAACCCTACATCTGCGACCTGTGTGGTAAATCGTTCCGTATCAAGTGGTCCCTCAGAGAGCACATCATGATCGAAATCGGCATGAAGGATTACGTATGCGAAATATGTGGCAAAAAGTTCGTTATCCAGGCCTACCTCAATAAGCACATGAGATTCCATATGATGTGCGATGGCAAATTCGAAGGATTCCAGTGCGAAATCTGTGGCAAGAAGTACGCCGAGGAATGGAAGGTCAAAGAACACCAGAGGAATTCGCACAAAGGCAAGAATTTGCTGCAGTACAAGTGCGACATATGCGATAAAAAGTATACTCGTAAGTGGCTCGTCAAATCGCACAAAAGGCAAGCCCACAAAGATCACCTGGAAGAATACCAATGCGACTATTGCGATAAAAAGTTCACAGAGAAATGGATTATCAAATTACACCTGCAGACTGTCCACAATATGAATAACTCGACCGATAACGCCAACTCTCCGGTTACCGTCAAAGCCACATCTGACGAATTGGAGAAATTGCTAGAGTATCATCAGAGGATATCGTGCGATGATACCAAGTCCCTGAAATTAGAAGAGTCCTCCATGGATGAGGGTAAACCGAGGCGGAAACCCTTCGAATGTGAACTCTGTGGTAAAATGTTTGCTACCAAGCAAGGTATGAAGAATCATTTGTACGCCGAGTTGAATATGCGCAAGTACGTTTGCGAAATCTGCGGCAAGAGGTATAACTGGTGGATGGGATTGAAAGAACATTCCATCATGAATCACGGAGCGAAAGAATTCGTCTGCGATCATTGCGGCAAAGATTTTCCAACCAAGAAACGCTGCCGAGATCATTTATCCGTTCATTCGGAAGAGAGACCTTATAATTGTAAATGTGGTAATGCCTTCAAGTTAAGGAGGTATTTGGCCAAGCATCAGAAACGATGCGGTAAagctattaaaaaagaatag
Protein Sequence: MAEIRHDYNGDSTICRYQVTEVVLDRPPPPQQQQNTPNERRNRIVDSVALAQPHQNRNSQGTSGPEPSYSLDAHSGLPQEMVYISCNESTSHGMAVDDDTLESGDEKLVDNYIKEEDMQIDDDNGGESKENNKIFPDEYEKFVVQYNKTSIKYMQCDKCQFICRPLTHIFEKHYKTHFDDPDIDEKPDINILQQMTESAATSSETVEQPEQIFKCDICNASFSTERSLHAHQKIHRARVFSCPLCGLIYKTRFELKVHKKTHASQVLSLVCNMCGKTFKTKSGYNHHRNNVCVEYKCEICGDMFLVKSVLQDHLKKVHDIEEDISVAEPEPPPKKEQASSVCPICGKMVTENALSRHLNLHSEDKPYICDLCGKSFRIKWSLREHIMIEIGMKDYVCEICGKKFVIQAYLNKHMRFHMMCDGKFEGFQCEICGKKYAEEWKVKEHQRNSHKGKNLLQYKCDICDKKYTRKWLVKSHKRQAHKDHLEEYQCDYCDKKFTEKWIIKLHLQTVHNMNNSTDNANSPVTVKATSDELEKLLEYHQRISCDDTKSLKLEESSMDEGKPRRKPFECELCGKMFATKQGMKNHLYAELNMRKYVCEICGKRYNWWMGLKEHSIMNHGAKEFVCDHCGKDFPTKKRCRDHLSVHSEERPYNCKCGNAFKLRRYLAKHQKRCGKAIKKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01472630;
90% Identity: iTF_01491289;
80% Identity: -