Bdim006048.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Balanococcus diminutus
Gene Symbol
PAXBP1
Assembly
GCA_959613365.1
Location
OY390715.1:31220229-31224469[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.8e-25 7.9e-21 75.0 5.0 1 272 565 778 565 780 0.89

Sequence Information

Coding Sequence
AtgtctttcttcaaaaaacctaATCGAAATATTCGAAGAAGAGAAATTGGATCCCAGGATGACGATGTTGATAACAAGGAATCCGAAATTATTAAACCAAAAAGTAAAAGTAGTGGCAGTCAGAATGGGGACTCGGCTTCCAAATCTATCAAACAAACGTTACTCAGTTTTGGTCAAGAATTTGACGAAGGAGATGACGGTGAAgtgtttcaaataaaacgtTCATATCAGAGCAAGAAAATACgtaaacaaattgataaagaaaaagaagaaaaacgtCGAAAAGGTTCTCCGAAAACAGAAACACTTGAAAGATCTGAAGATGGAAAAGGCGGAAAAAAGAAAGACAAGATTATTACAACTGATGATCAAGTtaccattaaaattaaaaatcccataGCAGGACCGGTGGTGGTACCGGAACGAATCCTGAGTGGCTTGAGTGCTGAAATGGCAGACTATAAAAGCGATTCAGATGAAGAAGATGAAAAGGAAGCGAATTTACGTCATCATAAATTTACTCAACCCGACCACGTTAAAATGCTGTTAAAAAGTGGTCGTATTCCTGATGCTGCTCTGATTCATGCTGCTCGAAAACGTAGACAAGAAGCTAGGGAAATGGGAGGCGCAAATTATATACcaattgaagatgaaaatgCCAAATTAGAGTCCGAAAATAAATCACGTTTAGTGAGAGAGGATGATAACGACGTAAGCGACGAAGAAGAAAGAATTACCATGTCTGGAATAGTAAGTTTTGCTGCTGATAGGGAAAAACGTAAAGAAGGTTTAGATACATATATTGCTTCAGATGGTGAAGACGATGAAACAGTTGAAGATGATGAATGGGAAAATCAGCAAATTCGTAAAGCTGTTACCGGTGCTcagttGGCAGCAGCGCAACAAGAATCGTATTATTACCAGTGTATGAACAATGCAGCAGCAGCAGTCACTTCTACGATTTCAGGAGTGCCTATACCATTAAATTCGCAATTGATTGGCGCGGCTGCTCTTCTGTCTCCGGAATCAGCGATATCGAATGCTGGCACTTCAGTTAGTTCAACAGCGTTTGCATCGTTTCTTACAGACAATTCTACAGAATCAGCTGATCCCGAAACCATCGCAAAGAAATTACAAGAAAGacTGGACAATCTCGAAGAAATGTACCAACGTCGCGAGAATGAATTAAATAACATCAACCACGAAATAATTACGTTGGAATCTGATTtcgaaaaacgtaaaataaacGTTCCCGAACTAGCCGAGCgtttccaattttatcaagACTTACGCGGGTATGTCACTGATCTGGTAGAATGTCTTGATGAAAAGATTCCAGTTATTAATTCTTTGGAACAGAGGCTAATTACTATGtatcagaaaaaaagtaacgaatTGATATCAAGAAGGCGACTCGATGTTAAAGATCAAATGGAGGATCTAACTCCAACCAaaaatttaattggcgTCAAAAAAGATGAAGAAAGAATAAGACGCACTGCCGAAAGGGAAGGCCGACGGATACGTAGATTGAAAGGTAGAAATTTAGGCACCATTGGATCTCATATTGAGGGAATGTCAAGTGACGATGAAATAACAGAAATGGCTGCTACTACCTATCGAAACCAGAAAGaaataatcgAATCGGATGCTCGCCGAGTTTTTGACGAtgttgttgaagaatttgtatCAATTGATGAAATCTTGAAGAGATTTTCAAGTTGgagaaaattggataaaactgCCTATGTTGAGGCATACGCGAATCTATGTTTACCTAAAGTCTTGGGACCAATAATTCGTATGGATATGTTGATGTGGAATCCTCTGAATAAAgaagAACAGGATAGTTTAGATGACTTCCATTGGATGAACagtatattattatattcgGCAGAAAAAACTGATACCGAAGAGTCTCTTCGTAAAGATCCAGATATACAGCTTTTGCCTAATCTGATAGATAAAATTGTCGTTCCTAAATTAGAACAAATCGTCAAAGTACAATGGGATCCTTTATCTACTTCCGAAACTCTACAATTGGTAACAGTTGTTCGCAGTATCATCGATTATCCATTTATAGCTcctaaaagtaaaatattcaCGCAGTTAATTAACACAGtcattgataaaatgaaaGATGCTGTAGAAAATGATGTATTCATTCCGATGTTCCCTAAACAactctTAGATAGTGGAAAACTAAATGTATTCTTCCAAAAGCAGTTTGCAAGCAGCGTTAAATTATTTGGTAATTTATTAAAGTGGCACGAAATCATTaacgaagaaattttaatcgacATTGCCAATTGCGCGTTGCTGAATCGATATCTTTTGATGGCTATTCGAACATTACAACCTTTGGAAGCAGCTGCTAAATGTCAAACGGTAGCCAGTCTTTTTCCTAGATCGTGGCTTAAAGAAAAACCAGAAACTGAGTCACAGCTGACGcagttttttggttttgtgaAACTACTCATCACTCAAATCGATGGCACTAATCCTCATGGAAGAGAAGCGATTGATAAATTAGCCGAGATCATTCGATATGTGTGA
Protein Sequence
MSFFKKPNRNIRRREIGSQDDDVDNKESEIIKPKSKSSGSQNGDSASKSIKQTLLSFGQEFDEGDDGEVFQIKRSYQSKKIRKQIDKEKEEKRRKGSPKTETLERSEDGKGGKKKDKIITTDDQVTIKIKNPIAGPVVVPERILSGLSAEMADYKSDSDEEDEKEANLRHHKFTQPDHVKMLLKSGRIPDAALIHAARKRRQEAREMGGANYIPIEDENAKLESENKSRLVREDDNDVSDEEERITMSGIVSFAADREKRKEGLDTYIASDGEDDETVEDDEWENQQIRKAVTGAQLAAAQQESYYYQCMNNAAAAVTSTISGVPIPLNSQLIGAAALLSPESAISNAGTSVSSTAFASFLTDNSTESADPETIAKKLQERLDNLEEMYQRRENELNNINHEIITLESDFEKRKINVPELAERFQFYQDLRGYVTDLVECLDEKIPVINSLEQRLITMYQKKSNELISRRRLDVKDQMEDLTPTKNLIGVKKDEERIRRTAEREGRRIRRLKGRNLGTIGSHIEGMSSDDEITEMAATTYRNQKEIIESDARRVFDDVVEEFVSIDEILKRFSSWRKLDKTAYVEAYANLCLPKVLGPIIRMDMLMWNPLNKEEQDSLDDFHWMNSILLYSAEKTDTEESLRKDPDIQLLPNLIDKIVVPKLEQIVKVQWDPLSTSETLQLVTVVRSIIDYPFIAPKSKIFTQLINTVIDKMKDAVENDVFIPMFPKQLLDSGKLNVFFQKQFASSVKLFGNLLKWHEIINEEILIDIANCALLNRYLLMAIRTLQPLEAAAKCQTVASLFPRSWLKEKPETESQLTQFFGFVKLLITQIDGTNPHGREAIDKLAEIIRYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01150343; iTF_01472463; iTF_01490968; iTF_01263368; iTF_00725516; iTF_01262454;
90% Identity
iTF_01472463; iTF_01150343; iTF_01490968;
80% Identity
-